BAC Information

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BAC

Clone NameB6Ng01-274N06
Chromosome18 (Build37)
Map Location 59,809,660 - 59,810,747
singlet/doubletsinglet
Overlap genenone
Upstream geneIsoc1, Adamts19, A730017C20Rik, 4833446K15Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3, Synpo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274N06.bB6Ng01-274N06.g
ACCGA076026GA076027
length1,082645
definitionB6Ng01-274N06.b B6Ng01-274N06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaatacgccttttactccctaatgcatccttgcttgcaaacaa
acaaaacccacatctcttttatatattttaactaatactgatgagctaca
agtcaaaataaataaaatatcattcacagttgaacaaaattataaaatgt
ttaacaaaatttttgacagaatatatgcacgtgctggtcactgcaacacc
agaatatttcctagttaaataaaaggaagcctatgtaaggaaaaagacat
cctgttttcatggtcagagaacttaagattataagatgttaattttcctt
taattggcatgtagacttaatccaatccagaaaagaattcaaaatattta
taggacataaaaagaagatttcatgtttcatgtaaaagatgaaagaatat
agtactgaaaataatttcagaaaagagttactaaagtttaaaaaggggga
ctgacatcatgtgatattagtatttattgtcacagtgaagttgcctggct
atggtgtttgatgttaataagtaggctaccaaacagaatctacattctcc
aaatacatttgtacagatttgagaaagacatgggaggtgattccgcacta
ggacacttagataaccacaagcaaaagtgtgaacttcagtctatggcttg
catcatatatgtatatagacatggggatgctatgcctatgcataagcatg
agagatttctgaaagttagtataagggaaaatactgcagccttgggtcaa
agataacttctgtataaagccaaaaaaccgtggctttatgtaaaaaagaa
agtacaattattatttttaatctacaggttccaaatactcagatatagct
aacccactatatatttaaaaaacatttttacttttaaagtgtgaatgtgt
gtgagatacatatatctgtatggcacactcagaggctagaggagggtgct
agatgtttctgtcactctcgtcttgttactttttgagtagattcttttca
ctgaactgggagttcatgactttgagcgagcttgtacccagccagctttg
atttacatctagcttgcctcccttggtgctag
gaattccatcttacaccagtcagaatggctaagatcaaaacctcaggtga
cagcagatgctggagaggatgtggaggaagaggaacattcctccattgct
ggtgggagtgcaaactgatactactttggaaatcaatctaggattacctc
agaaaattggaaatagacctacctgaagacccagctataccactctttgg
caaatacccaaaagacaccccaccatgccccggtgacgtgtgctccatga
tgttcatggtaaacttatttttaattgccagagctggaaacaacatagat
ataccttaaatgaaaaatgaatacagaaaatgtggtctgtttacacaatg
gaatactgttcagctattaagaacaagggcatcatgagttttgcaggcaa
aaggatggaactagaaaatatcctgagtgaagtaacccagactcaaaatg
acatacatggtatgtactcactagtatgtggatattagccaaaaagtaca
gaatatctaggaacaacccacagaacttaagaagtttaacaagcagaaag
gacaaatgatgtttcaatccaacttagaagggggaagaaaataatcatgg
gagacacagagaggaagggaattgggtggaactggggaggaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59809660_59810747
seq2: B6Ng01-274N06.b_46_1127 (reverse)

seq1  CTAGCACCAAGGGGAGCAAAGGCTAGATGTTAAATCAAGGCTGGCTGGGT  50
      |||||||||||||  ||||  |||||||| |||||||| |||||||||||
seq2  CTAGCACCAAGGGAGGCAA--GCTAGATG-TAAATCAAAGCTGGCTGGGT  47

seq1  ACCAGCCTCGCTCAAAGTCATGAACTCCCAGTTCAGTG-AAAGAATCTAC  99
      || || |||||||||||||||||||||||||||||||| |||||||||| 
seq2  ACAAG-CTCGCTCAAAGTCATGAACTCCCAGTTCAGTGAAAAGAATCTA-  95

seq1  CTCAAAAAGTAACAAGACGGAGAGTGACAGAAAACATCTAGCACCCTCCT  149
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  CTCAAAAAGTAACAAGAC-GAGAGTGACAG-AAACATCTAGCACCCTCCT  143

seq1  CTAGCCTCTGAGTGTGCCATACAGATATATGTATCTCACACACATTCACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTCTGAGTGTGCCATACAGATATATGTATCTCACACACATTCACA  193

seq1  CTTTAAAAGTAAAAATGTTTTTTAAATATATAGTGGGTTAGCTATATCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAGTAAAAATGTTTTTTAAATATATAGTGGGTTAGCTATATCTG  243

seq1  AGTATTTGGAACCTGTAGATTAAAAATAATAATTGTACTTTCTTTTTTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGGAACCTGTAGATTAAAAATAATAATTGTACTTTCTTTTTTAC  293

seq1  ATAAAGCCACGGTTTTTTGGCTTTATACAGAAGTTATCTTTGACCCAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCCACGGTTTTTTGGCTTTATACAGAAGTTATCTTTGACCCAAGG  343

seq1  CTGCAGTATTTTCCCTTATACTAACTTTCAGAAATCTCTCATGCTTATGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTATTTTCCCTTATACTAACTTTCAGAAATCTCTCATGCTTATGC  393

seq1  ATAGGCATAGCATCCCCATGTCTATATACATATATGATGCAAGCCATAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCATAGCATCCCCATGTCTATATACATATATGATGCAAGCCATAGA  443

seq1  CTGAAGTTCACACTTTTGCTTGTGGTTATCTAAGTGTCCTAGTGCGGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTCACACTTTTGCTTGTGGTTATCTAAGTGTCCTAGTGCGGAAT  493

seq1  CACCTCCCATGTCTTTCTCAAATCTGTACAAATGTATTTGGAGAATGTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCATGTCTTTCTCAAATCTGTACAAATGTATTTGGAGAATGTAG  543

seq1  ATTCTGTTTGGTAGCCTACTTATTAACATCAAACACCATAGCCAGGCAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTTGGTAGCCTACTTATTAACATCAAACACCATAGCCAGGCAAC  593

seq1  TTCACTGTGACAATAAATACTAATATCACATGATGTCAGTCCCCCTTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTGACAATAAATACTAATATCACATGATGTCAGTCCCCCTTTTT  643

seq1  AAACTTTAGTAACTCTTTTCTGAAATTATTTTCAGTACTATATTCTTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAGTAACTCTTTTCTGAAATTATTTTCAGTACTATATTCTTTCA  693

seq1  TCTTTTACATGAAACATGAAATCTTCTTTTTATGTCCTATAAATATTTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTACATGAAACATGAAATCTTCTTTTTATGTCCTATAAATATTTTG  743

seq1  AATTCTTTTCTGGATTGGATTAAGTCTACATGCCAATTAAAGGAAAATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTTCTGGATTGGATTAAGTCTACATGCCAATTAAAGGAAAATTA  793

seq1  ACATCTTATAATCTTAAGTTCTCTGACCATGAAAACAGGATGTCTTTTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTATAATCTTAAGTTCTCTGACCATGAAAACAGGATGTCTTTTTC  843

seq1  CTTACATAGGCTTCCTTTTATTTAACTAGGAAATATTCTGGTGTTGCAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATAGGCTTCCTTTTATTTAACTAGGAAATATTCTGGTGTTGCAGT  893

seq1  GACCAGCACGTGCATATATTCTGTCAAAAATTTTGTTAAACATTTTATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCACGTGCATATATTCTGTCAAAAATTTTGTTAAACATTTTATAA  943

seq1  TTTTGTTCAACTGTGAATGATATTTTATTTATTTTGACTTGTAGCTCATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCAACTGTGAATGATATTTTATTTATTTTGACTTGTAGCTCATC  993

seq1  AGTATTAGTTAAAATATATAAAAGAGATGTGGGTTTTGTTTGTTTGCAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAGTTAAAATATATAAAAGAGATGTGGGTTTTGTTTGTTTGCAAG  1043

seq1  CAAGGATGCATTAGGGAGTAAAAGGCGTATTTGGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGCATTAGGGAGTAAAAGGCGTATTTGGAATTC  1082