MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-275G04
Chromosome	18 (Build37)
Map Location	21,351,801 - 21,485,924
singlet/doublet	doublet
Overlap gene	Gm944, LOC665722
Upstream gene	Dsg1c, Dsg1a, Dsg1b, Dsg4, LOC435558, Dsg3, Tpi-rs10, Dsg2, Ttr, LOC100040823, B4galt6, D030074E01Rik, Rnf125, Rnf138, Mep1b, EG622978
Downstream gene	LOC225264, Klhl14, 4921528I01Rik, LOC546708
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dsg1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211924 MGI:2664358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dsg1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13510 MGI:94930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 34 ESTs, 8 Proteins

name	Dsg1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225256 MGI:2664357
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dsg4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16769 MGI:2661061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 34 Proteins pseudo : _no_value

name	Dsg3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13512 MGI:99499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpi-rs10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665674 MGI:98798
definition	gene_synonym : Tpi-10 note : triosephosphate isomerase related sequence 10 pseudo : _no_value

name	Dsg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13511 MGI:1196466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22139 MGI:98865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040823 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 708 ESTs, 6 Proteins

name	B4galt6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56386 MGI:1928380
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D030074E01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75964 MGI:2443008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf125 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67664 MGI:1914914
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf138 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56515 MGI:1929211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mep1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17288 MGI:96964
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622978 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622978 MGI:3647253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 363 ESTs, 8 Proteins

name	Gm944 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381126 MGI:2685790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665722 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	LOC225264 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:225264
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Klhl14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225266 MGI:1921249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921528I01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70950 MGI:1918200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546708 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 10 Proteins pseudo : _no_value

name	Dsg1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32129204 GeneID:211924 MGI:2664358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmoglein 1 gamma transcript_id : NM_181680.1

name	Dsg1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404300 GeneID:13510 MGI:94930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 34 ESTs, 7 Proteins product : desmoglein 1 alpha, transcript variant 1 transcript_id : XM_484705.3

name	Dsg1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404301 GeneID:13510 MGI:94930
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 31 ESTs, 3 Proteins product : desmoglein 1 alpha, transcript variant 2 transcript_id : XM_980693.1

name	Dsg1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32129200 GeneID:225256 MGI:2664357
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmoglein 1 beta transcript_id : NM_181682.1

name	Dsg4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328476 GeneID:16769 MGI:2661061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmoglein 4 transcript_id : NM_181564.2

name	Dsg3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376201 GeneID:13512 MGI:99499
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmoglein 3 transcript_id : NM_030596.3

name	Dsg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22779878 GeneID:13511 MGI:1196466
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmoglein 2 transcript_id : NM_007883.1

name	Ttr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802400 GeneID:22139 MGI:98865
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transthyretin transcript_id : NM_013697.2

name	LOC100040823 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269683 GeneID:100040823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 708 ESTs, 6 Proteins product : similar to ribosomal protein L35 transcript_id : XM_001475468.1

name	B4galt6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9790036 GeneID:56386 MGI:1928380
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 transcript_id : NM_019737.1

name	D030074E01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119964701 GeneID:75964 MGI:2443008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D030074E01 gene transcript_id : NM_029491.2

name	Rnf125 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350216 GeneID:67664 MGI:1914914
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 125 transcript_id : NM_026301.2

name	Rnf138 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46488940 GeneID:56515 MGI:1929211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 138 transcript_id : NM_207623.1

name	Rnf138 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46488938 GeneID:56515 MGI:1929211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 138 transcript_id : NM_019706.2

name	Mep1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678861 GeneID:17288 MGI:96964
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : meprin 1 beta transcript_id : NM_008586.1

name	EG622978 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404305 GeneID:622978 MGI:3647253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 363 ESTs, 8 Proteins product : predicted gene, EG622978 transcript_id : XM_888302.2

name	Gm944 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134288887 GeneID:381126 MGI:2685790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 944, (NCBI) transcript_id : NM_001033445.2

name	Klhl14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487136 GeneID:225266 MGI:1921249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch-like 14 (Drosophila) transcript_id : NM_001081403.1

name	4921528I01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802153 GeneID:70950 MGI:1918200
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921528I01 gene transcript_id : NM_027616.2

name	Dsg1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32129205 CCDS:CCDS29079.1 GeneID:211924 MGI:2664358
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030057 - desmosome [Evidence TAS] [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 note : desmoglein 1gamma; desmoglein 6 product : desmoglein 1 gamma protein_id : NP_859008.1

name	Dsg1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51770799 GeneID:13510 MGI:94930
definition	codon_start : 1 product : desmoglein 1 alpha isoform 1 protein_id : XP_484705.1

name	Dsg1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94404302 GeneID:13510 MGI:94930
definition	codon_start : 1 product : desmoglein 1 alpha isoform 2 protein_id : XP_985787.1

name	Dsg1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32129201 CCDS:CCDS29081.1 GeneID:225256 MGI:2664357
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030057 - desmosome [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 note : desmoglein 1beta; desmoglein 5 product : desmoglein 1 beta protein_id : NP_859010.1

name	Dsg4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31621307 CCDS:CCDS29082.1 GeneID:16769 MGI:2661061
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030057 - desmosome [Evidence IMP]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0042640 - anagen [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence IMP]; GO:0007156 - homophilic cell adhesion [Evidence IEA]; GO:0030216 - keratinocyte differentiation [Evidence IMP] codon_start : 1 note : lanceolate hair product : desmoglein 4 protein_id : NP_853543.1

name	Dsg3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625833 CCDS:CCDS29083.1 GeneID:13512 MGI:99499
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030057 - desmosome [Evidence TAS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005914 - spot adherens junction [Evidence TAS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence TAS]; GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 product : desmoglein 3 protein_id : NP_085099.2

name	Dsg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22779879 CCDS:CCDS29084.1 GeneID:13511 MGI:1196466
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030057 - desmosome [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation product : desmoglein 2 protein_id : NP_031909.1

name	Ttr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305599 CCDS:CCDS29085.1 GeneID:22139 MGI:98865
definition	GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0005179 - hormone activity [Evidence IEA]; GO:0016918 - retinal binding [Evidence IEA]; GO:0019841 - retinol binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA] GO_process : GO:0006590 - thyroid hormone generation [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : transthyretin protein_id : NP_038725.1

name	LOC100040823 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269684 GeneID:100040823
definition	codon_start : 1 product : similar to ribosomal protein L35 protein_id : XP_001475518.1

name	B4galt6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790037 CCDS:CCDS29086.1 GeneID:56386 MGI:1928380
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0008378 - galactosyltransferase activity [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0030148 - sphingolipid biosynthesis [Evidence TAS] codon_start : 1 function : catalyzes the synthesis of lactosylceramide note : UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase; beta-1, 4-galactosyltransferase VI product : UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 protein_id : NP_062711.1

name	D030074E01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119964702 CCDS:CCDS29087.1 GeneID:75964 MGI:2443008
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC75964 protein_id : NP_083767.2

name	Rnf125 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076895 CCDS:CCDS29088.1 GeneID:67664 MGI:1914914
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : ring finger protein 125 protein_id : NP_080577.1

name	Rnf138 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46488941 CCDS:CCDS29090.1 GeneID:56515 MGI:1929211
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ring finger protein 138 isoform 1 protein_id : NP_997506.1

name	Rnf138 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46488939 CCDS:CCDS29089.1 GeneID:56515 MGI:1929211
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ring finger protein 138 isoform 2 protein_id : NP_062680.2

name	Mep1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678862 GeneID:17288 MGI:96964
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008533 - astacin activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004238 - meprin A activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : meprin beta product : meprin 1 beta protein_id : NP_032612.1

name	EG622978 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82995837 GeneID:622978 MGI:3647253
definition	codon_start : 1 product : similar to ribosomal protein L27a-like protein_id : XP_893395.1

name	Gm944 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134288888 CCDS:CCDS29091.1 GeneID:381126 MGI:2685790
definition	codon_start : 1 product : hypothetical protein LOC381126 protein_id : NP_001028617.2

name	Klhl14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487137 GeneID:225266 MGI:1921249
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : kelch-like 14 protein_id : NP_001074872.1

name	4921528I01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794402 CCDS:CCDS29092.1 GeneID:70950 MGI:1918200
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC70950 protein_id : NP_081892.1

name	LOC435558 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435558
definition	number : 1 pseudo : _no_value

name	LOC435558 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435558
definition	number : 2 pseudo : _no_value

name	LOC435558 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435558
definition	number : 3 pseudo : _no_value

name	LOC435558 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435558
definition	number : 4 pseudo : _no_value

name	LOC225264 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:225264
definition	number : 1 pseudo : _no_value

name	LOC665722 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269686 GeneID:665722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : similar to Translocase of outer mitochondrial membrane 20 homolog (yeast) pseudo : _no_value transcript_id : XR_032341.1

name	LOC546708 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269668 GeneID:546708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 10 Proteins product : similar to Ribosomal protein SA pseudo : _no_value transcript_id : XR_031954.1

clone name	MSMg01-523M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068G11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-385P22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-167B10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-378N15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-406E08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-521M06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-056D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305G10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-274P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-161C09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-326M13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-355G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546O23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-341L01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-132D14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-099A16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-405C04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-466D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-390O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-129C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-056P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-378I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228N20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-275G04.b	B6Ng01-275G04.g
ACC	GA076441	GA076442
length	1,134	987
definition	B6Ng01-275G04.b	B6Ng01-275G04.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(21,351,801 - 21,352,929)	(21,484,946 - 21,485,924)
sequence	gaattctagacaatgtgggtaggtgttctcagtcagagatggaatgttga tcgagtcctccctgctaatttggaaactgcttctagaatctgcaattatt tcttaaaatagggtttaaaaaatctctgtcttcaactagactttaatttg cctagtttaacttgttttgaaatttctataaaaagccacaaaggaacact ctaaaaattaccaaaaggatacgtttaccatgagcagtaagaggaggatt aaacattaaattcacaatggtttaaatttatgaattggaatcttgtcaaa agtcattacattgttcaatgagaggagaggacagaaggcaagggctctgt ctgactgacattaggcctcttactgtatgggttagcttctgctacaagaa gttccattattttaaatgaatcacaacttaatgattaaaagaaagctatt cacaatcctcctatcccaagagaaacggaaagtaggcaatacccaaagtg agtctgtgccctgtaaagtccaatttaaacagtaacagccaaaaagtgct tgcttttctttcttctttataactatataattttcttattcaaatgagag aacataaaaattaaaaatacttacagtataagtatatactggtattgcat tataaaggttaagcaggtcatgtgcatttacaagaataagcattcaatat ttattgggcatttacaaagaattctgacgaccaacccagctcacagaatt tgcaatattaactcagcttaacatttatactaccctatactatttatact acactatagagacctaaagtttacctgtaagattttcgtctgatttcatg ttctactagggtcaggtcagactagaattacacacagtgcttccagttat gtgggataattagttcagatgtaacaggtgtggaaaagaccaggttttta atcttaaaggctttgttctctaaaagcccgtaaaattgagtttacacata tttgagatggtgggtggactgactctcacgggtctcacaacaacaactga gcatctgttgaagaaggaatagttacggtaacagagttcacactcccctc cttggagcacaagctatcttctaggaaacagttt	gaattctttccccagatgtataatcagccatttcttcaggagatgtgatt ccttctcagggttaatagtattctgaggtaatgtccgagtcccaaggatc tcgtcagagctgtaatcatagtttctcagtggttgcctaggagaggatta gaaaaaaatgcatttgaaaagtcctattgatatttctcatcagaagcaag actgtgaagttttcatctaacctctttcatcttaattctgtatattccct tcccccacaccataaatccaaacaatctaatggtcatacttatttgattg atcccatgttacacacacacaaacaaaatagagtgagaatattatcatct cacagggatacataaggaacttgagcactgccagaaatatttttcgagaa gccaaatattccacaagaaagagaaaaaaaaaaggaaaaattggaaatga caaactgggagtggtacaatttgtacccaaaatgtgtacaaagctttggg ttacagattgttatagatgttgtggtccaagaggctgcctatatacggtg tctatggagaatagaaatttttagtactcaggagtattaatttattaata atcagtagtttaattttaaatgagtactgattttaatttttcttctaata gatatcatcaagaatccagacagaacacatttacttcaaaaatattgaga atggtttgccatttttttccactgataccattttaattggttctctggga atttcacttcatacaccctgatcacaatcccttcccagtccttccatgcc catctcacctgtgatcttcccccacgaaaagtaaaaaaaaaaaaaaaagg aggaggaggagggggaggaaggaggaggaagcctgggactgtattgtcaa agggtttaatctcgaaggcaggagggatctccatgcctttccagccaacc ctgatctacatagaaaagttccaggaatagccaggga
quality values	Open. Hide. 62 41 27 38 62 62 62 47 62 49 42 32 62 54 62 54 62 62 54 62 62 62 62 62 62 62 49 49 62 59 59 62 62 59 59 62 62 62 54 46 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 49 54 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 54 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 58 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 54 49 58 58 58 58 58 58 54 58 58 54 58 58 49 47 58 58 49 58 53 53 58 53 58 58 58 58 58 58 58 58 58 58 58 58 53 58 58 52 58 58 58 51 53 47 58 58 58 50 58 51 54 51 58 49 58 58 58 54 51 58 54 53 58 54 32 49 58 54 58 58 34 58 50 58 58 49 50 58 51 58 58 58 41 53 58 51 58 58 58 58 51 53 53 54 58 51 54 39 58 42 53 53 58 58 50 58 37 41 53 58 52 58 58 58 58 50 53 51 50 58 42 43 47 58 53 53 52 58 51 58 58 40 49 40 54 49 51 41 30 54 37 49 45 53 54 53 49 34 32 46 54 54 37 50 40 54 52 54 52 53 52 51 37 49 38 45 51 40 24 49 49 52 47 54 44 39 46 45 54 33 35 34 32 45 54 52 35 47 25 54 51 37 54 42 32 51 45 39 42 45 32 32 52 40 47 28 53 49 46 39 32 43 53 53 36 45 32 53 42 49 52 36 52 51 52 52 34 47 52 43 32 40 30 49 47 53 40 32 40 52 53 31 31 53 52 32 40 49 40 31 31 31 42 32 31 41 46 36 25 45 31 31 43 31 45 31 51 31 30 30 29 45 38 37 45 30 42 31 31 42 43 31 42 30 25 15 31 31 33 46 43 33 31 47 30 31 28 30 33 46 32 33 33 31 30 12 48 46 34 31 31 31 31 31 43 30 18 47 28 28 31 36 42 24 27 31 27 34 32 31 36 15 47 38 29 38 30 10 23 20 35 27 18 25 16 33 30 21 30 30 24 33 24 32 23 31 28 31 31 31 26 41 32 31 37 32 38 31 24 31 30 20 20 31 34 44 47 33 29 9 14 29 31 29 31 19 26 26 30 25 14 32 17 29 24 19 30 29 20 21 24 17 38 29 17 24 31 47 48 38 24 33 21 26 23 20 24 28 43 48 48 30 15 17 31 33 15 29 9 43 7 24 12 18 32 48 29 11 13 13 27 21 29 32 33 48 48 32 16 20 36 28 14 21 27 48 48 32 10 21 23 30 17 27 47 20 24 20 11 22 16 14 10 19 34 14 19 28 16 22 14 29 20 16 27 34 21 4 5 13 10 13 19 7 4 5 8 4 3 6 20 16 18 34 19 6 9 10 17 16 22 9 24 7 7 8 9 6 18 14 14 10 6 3 5 14 16 10 6 21 16 23 21 17 4 4 18 25 5 8 19 18 5 3 3 1 6 8 13 14 14 10 20 10 11 4 6 19 4 15 9 15 22 8 11 10 12 7 26 25 5 5 3 6 5 4 6 7 19 9 14 10 16 7 7 8 15 18 9 7 4 6 9 6 8 5 8 4 7 15 4 6 13 5 3 16 18	Open. Hide. 40 25 47 54 62 62 62 62 62 62 21 26 31 10 10 16 22 38 32 22 56 56 62 62 47 44 62 62 47 47 62 62 62 62 62 62 59 62 62 62 59 59 59 59 62 62 62 59 59 62 62 62 62 49 62 51 56 43 28 43 46 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 59 59 62 62 62 62 62 62 59 54 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 37 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 52 62 54 49 62 54 62 42 62 54 62 62 47 46 62 54 62 62 62 58 58 58 58 52 58 58 54 54 52 58 58 49 54 42 58 54 50 58 54 58 49 29 46 58 58 58 54 48 54 58 52 52 54 58 50 35 58 54 36 54 47 35 47 52 54 49 58 54 52 47 46 54 58 52 54 54 48 54 38 54 54 58 49 58 58 33 52 47 35 58 58 31 34 58 58 52 54 58 35 54 52 48 58 58 41 52 58 58 46 52 50 51 58 58 58 58 51 51 49 52 52 49 47 48 51 50 51 41 40 37 48 50 51 50 51 50 41 58 50 34 47 47 35 50 54 39 39 50 58 50 47 50 42 33 46 58 42 40 50 50 50 35 17 58 58 58 37 50 39 40 58 49 49 39 58 37 29 58 54 39 58 48 48 42 42 37 50 58 58 58 58 58 42 31 53 32 50 37 41 39 39 28 28 24 32 44 36 41 40 53 50 32 50 51 42 23 50 40 39 50 31 41 58 38 53 50 31 58 51 30 39 39 39 44 41 29 39 39 40 39 37 49 44 28 38 47 42 34 34 37 34 47 41 34 54 50 39 41 35 54 29 32 31 29 37 38 37 39 32 39 26 31 39 32 54 40 32 38 39 34 31 34 30 35 33 52 37 37 33 29 31 32 22 32 54 54 54 37 28 45 26 51 54 54 42 31 33 41 54 54 54 49 49 54 54 54 54 54 49 54 54 54 44 37 36 32 21 29 47 19 31 52 13 27 47 25 51 49 49 25 30 6 28 15 23 9 31 47 19 24 49 25 32 31 20 6 15 8 23 7 21 24 4 16 26 6 9 6 6 11 11 6 9 6 6 6 5 15 11 19 21 19 10 14 19 8 10 11 8 12 21 5 10 13 19 24 23 6 15 30 8 18 29 11 31 9 6 21 9 13 8 8 17 7 12 15 7 9 21 12 27 19 16 6 23 13 13 17 6 9 21 18 29 28 13 14 15 7 21 32 46 26 18 22 5 10 21 24 16 15 17 17 23 15 12 14 14 21 30 30 10 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_21351801_21352929
seq2: B6Ng01-275G04.b_43_1176

seq1  GAATTCTAGACAATGTGGGTAGGTGTTCTCAGTCAGAGATGGAATGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGACAATGTGGGTAGGTGTTCTCAGTCAGAGATGGAATGTTGA  50

seq1  TCGAGTCCTCCCTGCTAATTTGGAAACTGCTTCTAGAATCTGCAATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTCCTCCCTGCTAATTTGGAAACTGCTTCTAGAATCTGCAATTATT  100

seq1  TCTTAAAATAGGGTTTAAAAAATCTCTGTCTTCAACTAGACTTTAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAATAGGGTTTAAAAAATCTCTGTCTTCAACTAGACTTTAATTTG  150

seq1  CCTAGTTTAACTTGTTTTGAAATTTCTATAAAAAGCCACAAAGGAACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTTAACTTGTTTTGAAATTTCTATAAAAAGCCACAAAGGAACACT  200

seq1  CTAAAAATTACCAAAAGGATACGTTTACCATGAGCAGTAAGAGGAGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATTACCAAAAGGATACGTTTACCATGAGCAGTAAGAGGAGGATT  250

seq1  AAACATTAAATTCACAATGGTTTAAATTTATGAATTGGAATCTTGTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAAATTCACAATGGTTTAAATTTATGAATTGGAATCTTGTCAAA  300

seq1  AGTCATTACATTGTTCAATGAGAGGAGAGGACAGAAGGCAAGGGCTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTACATTGTTCAATGAGAGGAGAGGACAGAAGGCAAGGGCTCTGT  350

seq1  CTGACTGACATTAGGCCTCTTACTGTATGGGTTAGCTTCTGCTACAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGACATTAGGCCTCTTACTGTATGGGTTAGCTTCTGCTACAAGAA  400

seq1  GTTCCATTATTTTAAATGAATCACAACTTAATGATTAAAAGAAAGCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATTATTTTAAATGAATCACAACTTAATGATTAAAAGAAAGCTATT  450

seq1  CACAATCCTCCTATCCCAAGAGAAACGGAAAGTAGGCAATACCCAAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCCTCCTATCCCAAGAGAAACGGAAAGTAGGCAATACCCAAAGTG  500

seq1  AGTCTGTGCCCTGTAAAGTCCAATTTAAACAGTAACAGCCAAAAAGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGCCCTGTAAAGTCCAATTTAAACAGTAACAGCCAAAAAGTGCT  550

seq1  TGCTTTTCTTTCTTCTTTATAACTATATAATTTTCTTATTCAAATGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTTTCTTCTTTATAACTATATAATTTTCTTATTCAAATGAGAG  600

seq1  AACATAAAAATTAAAAATACTTACAGTATAAGTATATACTGGTATTGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAAAATTAAAAATACTTACAGTATAAGTATATACTGGTATTGCAT  650

seq1  TATAAAGGTTAAGCAGGTCATGTGCATTTACAAGAATAAGCATTCAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGTTAAGCAGGTCATGTGCATTTACAAGAATAAGCATTCAATAT  700

seq1  TTATTGGGCATTTACAAAGAATTCTGACGACCAACCCAGCTCACAGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGGCATTTACAAAGAATTCTGACGACCAACCCAGCTCACAGAATT  750

seq1  TGCAATATTAACTCAGCTTAACATTTATACTACCCTATACTATTTATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATTAACTCAGCTTAACATTTATACTACCCTATACTATTTATACT  800

seq1  ACACTATAGAGACCTAAAGTTTACCTGTAAGATTTTCGTCTGATTTCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATAGAGACCTAAAGTTTACCTGTAAGATTTTCGTCTGATTTCATG  850

seq1  TTCTACTAGGGTCAGGTCAGACTAGAATTACACACAGTGCTTCCAGTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTAGGGTCAGGTCAGACTAGAATTACACACAGTGCTTCCAGTTAT  900

seq1  GTGGGATAATTAGTTCAGATGTAACAGGTGTGGAAAAGACCAGGTTTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATAATTAGTTCAGATGTAACAGGTGTGGAAAAGACCAGGTTTTTA  950

seq1  ATCTT-AAGGCTTTGTTCTCTAAAAGCCCGTAAAATTGAGTTTACACATA  999
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAAGGCTTTGTTCTCTAAAAGCCCGTAAAATTGAGTTTACACATA  1000

seq1  TTTGAGATGGTGGGTGGACTGAACTCCTCACGGGTCTCACAAC-ACAACT  1048
      ||||||||||||||||||||| ||| ||||||||||||||||| ||||||
seq2  TTTGAGATGGTGGGTGGACTG-ACT-CTCACGGGTCTCACAACAACAACT  1048

seq1  GAGGCATCTGTTG-AGAAGAATAAGGTACGGTAACAGAGTTCA-ACAACT  1096
      || |||||||||| ||||| |  || ||||||||||||||||| ||  | 
seq2  GA-GCATCTGTTGAAGAAGGAATAGTTACGGTAACAGAGTTCACACTCCC  1097

seq1  C-CCTCTGAGCAC-AGCTATC-TCTA-GAAACAGTTT  1129
      | |||  |||||| ||||||| |||| ||||||||||
seq2  CTCCTTGGAGCACAAGCTATCTTCTAGGAAACAGTTT  1134

seq1: chr18_21484946_21485924
seq2: B6Ng01-275G04.g_71_1057 (reverse)

seq1  TCCCTGGCTA-TCCTGGAAC-TTTCTATGTAGACCAGGTTGGCCTG--AA  46
      |||||||||| ||||||||| |||||||||||| |||| | | |||  ||
seq2  TCCCTGGCTATTCCTGGAACTTTTCTATGTAGATCAGGGTTGGCTGGAAA  50

seq1  TGCATAGAGAT-CCACCTGCCTCTGAGATTAAAGCCATGTGCCACTACAG  95
       |||| ||||| || |||||||  ||||||||| || | || || |||||
seq2  GGCATGGAGATCCCTCCTGCCTTCGAGATTAAA-CCCTTTGACAATACAG  99

seq1  -CCCA-GCTTCCTCCTCC-TCCTCCCCCTCCTCCTCCTCC-TTTTTTTTT  141
       |||| |||||||||||| ||||||||||||||||||||| |||||||||
seq2  TCCCAGGCTTCCTCCTCCTTCCTCCCCCTCCTCCTCCTCCTTTTTTTTTT  149

seq1  TTTTTTACTTTTCGTGGGGGAAGATCACAGGTGAGATGGGCATGGAAGGA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTACTTTTCGTGGGGGAAGATCACAGGTGAGATGGGCATGGAAGGA  199

seq1  CTGGGAAGGGATTGTGATCAGGGTGTATGAAGTGAAATTCCCAGAGAACC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGGGATTGTGATCAGGGTGTATGAAGTGAAATTCCCAGAGAACC  249

seq1  AATTAAAATGGTATCAGTGGAAAAAAATGGCAAACCATTCTCAATATTTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATGGTATCAGTGGAAAAAAATGGCAAACCATTCTCAATATTTT  299

seq1  TGAAGTAAATGTGTTCTGTCTGGATTCTTGATGATATCTATTAGAAGAAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAAATGTGTTCTGTCTGGATTCTTGATGATATCTATTAGAAGAAA  349

seq1  AATTAAAATCAGTACTCATTTAAAATTAAACTACTGATTATTAATAAATT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATCAGTACTCATTTAAAATTAAACTACTGATTATTAATAAATT  399

seq1  AATACTCCTGAGTACTAAAAATTTCTATTCTCCATAGACACCGTATATAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCCTGAGTACTAAAAATTTCTATTCTCCATAGACACCGTATATAG  449

seq1  GCAGCCTCTTGGACCACAACATCTATAACAATCTGTAACCCAAAGCTTTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTCTTGGACCACAACATCTATAACAATCTGTAACCCAAAGCTTTG  499

seq1  TACACATTTTGGGTACAAATTGTACCACTCCCAGTTTGTCATTTCCAATT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTTTGGGTACAAATTGTACCACTCCCAGTTTGTCATTTCCAATT  549

seq1  TTTCCTTTTTTTTTTCTCTTTCTTGTGGAATATTTGGCTTCTCGAAAAAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTTTTTTTCTCTTTCTTGTGGAATATTTGGCTTCTCGAAAAAT  599

seq1  ATTTCTGGCAGTGCTCAAGTTCCTTATGTATCCCTGTGAGATGATAATAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGCAGTGCTCAAGTTCCTTATGTATCCCTGTGAGATGATAATAT  649

seq1  TCTCACTCTATTTTGTTTGTGTGTGTGTAACATGGGATCAATCAAATAAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCTATTTTGTTTGTGTGTGTGTAACATGGGATCAATCAAATAAG  699

seq1  TATGACCATTAGATTGTTTGGATTTATGGTGTGGGGGAAGGGAATATACA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCATTAGATTGTTTGGATTTATGGTGTGGGGGAAGGGAATATACA  749

seq1  GAATTAAGATGAAAGAGGTTAGATGAAAACTTCACAGTCTTGCTTCTGAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAGATGAAAGAGGTTAGATGAAAACTTCACAGTCTTGCTTCTGAT  799

seq1  GAGAAATATCAATAGGACTTTTCAAATGCATTTTTTTCTAATCCTCTCCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATATCAATAGGACTTTTCAAATGCATTTTTTTCTAATCCTCTCCT  849

seq1  AGGCAACCACTGAGAAACTATGATTACAGCTCTGACGAGATCCTTGGGAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACCACTGAGAAACTATGATTACAGCTCTGACGAGATCCTTGGGAC  899

seq1  TCGGACATTACCTCAGAATACTATTAACCCTGAGAAGGAATCACATCTCC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGACATTACCTCAGAATACTATTAACCCTGAGAAGGAATCACATCTCC  949

seq1  TGAAGAAATGGCTGATTATACATCTGGGGAAAGAATTC  979
      ||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAATGGCTGATTATACATCTGGGGAAAGAATTC  987

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information