BAC Information

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BAC

Clone NameB6Ng01-277G12
Chromosome18 (Build37)
Map Location 7,331,294 - 7,331,882
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621100, LOC665028, EG622152, Epc1, LOC665047, 4921524L21Rik, LOC100039583, EG665053, Rab18, LOC620787, LOC100039635, Mkx, LOC664778, Armc4
Downstream geneMpp7, EG622384, LOC100039562, LOC100039606, Wac, LOC665121, LOC225134, LOC665132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277G12.bB6Ng01-277G12.g
ACCGA077936GA077937
length1,2031,159
definitionB6Ng01-277G12.b B6Ng01-277G12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacataaaaccagagacactgaaacttatagaggagaaagtggg
ggaaagcctcgaagatatgggtacagggaaaaaattcgtgaatagaacaa
caatggtttgtgctgtaagattgagaatcgacaaatgggacctcataaaa
ttgcaaagcttctgtaaagcaaaagacactgtcaataagacaaaaaaacc
accaacagattgggaaaggatctttacctatcctaaattagataggggac
taatattcaatatatatatatatatatataaaaatcaagaaggtgggctc
caaaaaatcgaataaccccattaaaaaatggggtgcaacacttaaacaaa
atattctcacctgaggaataccgaatggctgaaaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaacttcaaggacagca
gatgctgacgaggatgtggagaaaggaattctcctccattgttcgtgggg
ttgcaagcttgtactctggaaatcagtcttgtggttcttcagaaaattgg
atatagtagtactggaggatcctgcaatacctctccttggcataaatcca
gaagctgttccaaccggtaagaaggacacatgctccactatgttcatagc
agccttatttgtaatagccagaagctggaaagaatccagatgttcctcaa
cagaagagtagctacagaaaatgtggtacatttgcacaatggagtactac
tcagctattaaaaagaatgaatttatgaaattcctaggcaaatggatgga
cctggagggtatcatcctgagtgaggtaacccaatcacaaagaactctca
caatatgtactcactgataagtggttattagcccagatacttagaatacc
caagatataagtcacaatttgtgaaactcatcaaactcaagagaacgaag
accaaagtgtggacaggttgcccctttcctagagttaggaacaaaccacc
ccatgtagagttacgaagacaagtttatagctgagagaaggacggatcca
tcttagagactgccacacctgggatcatcccaatatcaactcaaagcctg
acaccatgcttcactagccaagtattttgtctctgagaaagaacacccct
tga
gaattcagtgaaaatgaaggcacaatataccgaaacttatgggatacaat
gaaagcaatgctaagaggaaaactcatatctctgagtgcctccaaaaaga
aactggagagagcatacactagcagcttgacagaacaccagaaagctcta
gaacaaaaagaagcaaatacacccaagaggagtagatggcaggaaataat
aagtcaggactgaaatcaaccaaatagaaataaaaagaactatacaaaga
atcataaaaaacagaagctagttctttaagaaaatcaacaagataggtta
atccttagcagactaaccagagagcacagagacagtatctaaattttaaa
aaatcagaaatgcaaagggagacataacagaaactgaggaaattcagaaa
atcatcagatcctactacaaaagcctatattcaacaaaactggaaaatct
gtatgaaatggacaattttctagacagatattaaatatcaaagttaaata
aggagcagataatctgaataatcccataacccctaaagaaatagaagcag
tcattaaaagtctcccaactaaaaaaaagcccaagactagatgggtttgt
tgcagaattctatcagacctttaaagaagacctaataccaatactcttca
aactattccacaaaatagaaacagaaggattactacccaattcattctat
gaagccacagctatgctgcatattttcctttggagatggaacggtttctc
tctaatcaggaacttttcacaatttccttttgtagaggacttcataagag
atttttttttctacttctatcatgtttaatgttccaaacagattttagaa
actgggttgagtgcatgttactttttagcttcagaagatatcatgtatat
ttaaagaggtatttaactattataaattattttgatgacttaaaaaaatg
tcaatagtaaggttgtaatattttaaaaatattattattaggttaataaa
aaaatcatctggtggtttcattaggtaatggggattcattggtggtttcc
attctgtttatcacataggtaatattttacatgtcattaaactacttttg
tagggcgaatttaaaatagtctgcacttcggagtatgccttacttatata
cttttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_7331294_7331882
seq2: B6Ng01-277G12.g_616_1223

seq1  CATTAAAAGTCTCCCAACTAAAAAAAAGCCCAAGACTAGATGGGTTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAGTCTCCCAACTAAAAAAAAGCCCAAGACTAGATGGGTTTGTT  50

seq1  GCAGAATTCTATCAGACCTTTAAAGAAGACCTAATACCAATACTCTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATTCTATCAGACCTTTAAAGAAGACCTAATACCAATACTCTTCAA  100

seq1  ACTATTCCACAAAATAGAAACAGAAGGATTACTACCCAATTCATTCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCCACAAAATAGAAACAGAAGGATTACTACCCAATTCATTCTATG  150

seq1  AAGCCACAGCTATGCTGCATATTTTCCTTTGGAGATGGAACGGTTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAGCTATGCTGCATATTTTCCTTTGGAGATGGAACGGTTTCTCT  200

seq1  CTAATCAGGAACTTTTCACAATTTCCTTTTGTAGAGGACTTCATAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAGGAACTTTTCACAATTTCCTTTTGTAGAGGACTTCATAAGAGA  250

seq1  -TTTTTTTTCTACTTCTATCATGTTTAATGTTCCAAACAGATTTTAGAAA  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTACTTCTATCATGTTTAATGTTCCAAACAGATTTTAGAAA  300

seq1  CT-GGTTGAGTGCATGTTAC-TTTTAGCTTCAGAAGATATCATGTATATT  347
      || ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGGGTTGAGTGCATGTTACTTTTTAGCTTCAGAAGATATCATGTATATT  350

seq1  T-AAGAGGTATTTAACTATTATAAATTATTTTGATGACTT-AAAAAATGT  395
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAAGAGGTATTTAACTATTATAAATTATTTTGATGACTTAAAAAAATGT  400

seq1  CAATAGTAA-GTTGT-ATATTTT-AAAATA-TATTATTAGTTTAAT-AAA  440
      ||||||||| ||||| ||||||| |||||| ||||||||| ||||| |||
seq2  CAATAGTAAGGTTGTAATATTTTAAAAATATTATTATTAGGTTAATAAAA  450

seq1  AAATCATCTG--TGTTTCA-TAAGTAATGGGATTTCATTTGTGGTTCCAT  487
      ||||||||||   |||||| || ||||||||  |||||| |||||| |  
seq2  AAATCATCTGGTGGTTTCATTAGGTAATGGGGATTCATTGGTGGTTTCCA  500

seq1  TTCTGTTTATCCACATA-GTTATA-TTTACATGTCATAAAATTACTTTTG  535
      |||||||||| |||||| || ||| |||||||||||| ||| ||||||||
seq2  TTCTGTTTAT-CACATAGGTAATATTTTACATGTCATTAAACTACTTTTG  549

seq1  TA-GGCGA--TTTAAATAGTGTTGGAGTTTGGAGTATGC--TAATTTTAT  580
      || |||||  || |||||||  || | || |||||||||  || || |||
seq2  TAGGGCGAATTTAAAATAGT-CTGCACTTCGGAGTATGCCTTACTTATAT  598

seq1  ACTTTGGGG-  589
      ||||| ||| 
seq2  ACTTTTGGGG  608