BAC Information

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BAC

Clone NameB6Ng01-277M14
Chromosome18 (Build37)
Map Location 15,607,399 - 15,608,439
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151, Aqp4, LOC665473
Downstream geneChst9, LOC670012, LOC100040551, EG225228, LOC100040202, Ppia-ps18_172.1, EG665509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277M14.bB6Ng01-277M14.g
ACCGA078209GA078210
length1,0511,208
definitionB6Ng01-277M14.b B6Ng01-277M14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagacaggaatagcagaacaaagagtctgcggaccaagctactg
cccagtattagagcaaataggtactgaaggattcatcaaagaatgtgtca
tcataccgcatgcacactgacattaaaataggaaggttggacatatgcaa
agtgagtctggactagtccccttacccttccagtcatgaaattatgtttt
cccagtggtgcagctacatggatttgtgtacacaagccgatacattgaat
gtgaatttgagctggtccacaaaggaggacagctcaggacaaatgaatga
attattatattgtatatgtttatatgtgtatgtacatatgtgaatatacc
tgattatacaaggatgaattattatatattatgataaaaattatatactt
aaatataacaatagatctaggatggtaaatagtttctttggctctgacat
aaaatcatatagaggagaggttatacagcaggttgttattcagtggaaaa
acagcaaacctgttctgttgaatgcacagctgtgcagggtgtcaggcata
gagtgcatctgagaaaggaatgaacactgttcagtagttctatatgaagg
ggcagtcagatgaggaatgagtggagctggtcctgttatccatggcaggt
gttctccatgttcccccgtagatgcctcaagcaccacagggaacacctaa
acccacagaggtttctgttttcctacttacacataaatacctatgaaaag
tttaatttataaattatgtgcagtaagagattaacaataattaataaaag
agacacttatgacaatatatttataaaatgtatggcaatgttttatcact
ctgtgttttctttaatcttcctgtttgcatgctcgcacctttcctatact
aacctaaaagtgatgaaatgcttgcctgatgggacggcatgaaggtcaat
gatacaggcactgtgatgtagtccttagactattttattaccacaaagcc
actttagcacaaaactctgcgatcctgtgaaagttcagttttgagacctg
c
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacaaattaaaga
aattgccgagtcggtccgtaaatacggaaccaatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactcctgccgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agcgctttggcacgaagctgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcagacaaactaccattggggagcttatgccca
gatttcttccacggctattagggcctggaaggcgctctctcgagcaggtg
aaaccactggtcagttaacaaagataatccagggacctcaggaatccttc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
gtcagagcaagctgtgcctctgatagaacagctaatctatgagcaagcca
caaaggagtgccgagcggccatagccccaagaaagaacaaaggcttacaa
gactggctcagggttctgtcgagagcttgggggacctctcacaaatgcag
gcttagcgggcgccatccttccaatctcagaaccgctccatgagcagaaa
tgatcagagacatgttttaattgcggaaagcctgggccattttagaaaag
aattgcaaagcttccagaataacagggagggaactctttcacctctttgc
ctctaagtgtgggcaaaggattatacattagaagcctgacaggtgtcccc
tctggtggaggcatataataggcgaggaatctctttctccctacactgtg
tagattag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_15607399_15608439
seq2: B6Ng01-277M14.b_49_1099

seq1  GAATTCCAGACAGGAATAGCAGAACAAAGAGTCTGCGGACCAAGCTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACAGGAATAGCAGAACAAAGAGTCTGCGGACCAAGCTACTG  50

seq1  CCCAGTATTAGAGCAAATAGGTACTGAAGGATTCATCAAAGAATGTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTATTAGAGCAAATAGGTACTGAAGGATTCATCAAAGAATGTGTCA  100

seq1  TCATACCGCATGCACACTGACATTAAAATAGGAAGGTTGGACATATGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCGCATGCACACTGACATTAAAATAGGAAGGTTGGACATATGCAA  150

seq1  AGTGAGTCTGGACTAGTCCCCTTACCCTTCCAGTCATGAAATTATGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTCTGGACTAGTCCCCTTACCCTTCCAGTCATGAAATTATGTTTT  200

seq1  CCCAGTGGTGCAGCTACATGGATTTGTGTACACAAGCCGATACATTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGGTGCAGCTACATGGATTTGTGTACACAAGCCGATACATTGAAT  250

seq1  GTGAATTTGAGCTGGTCCACAAAGGAGGACAGCTCAGGACAAATGAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTTGAGCTGGTCCACAAAGGAGGACAGCTCAGGACAAATGAATGA  300

seq1  ATTATTATATTGTATATGTTTATATGTGTATGTACATATGTGAATATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATATTGTATATGTTTATATGTGTATGTACATATGTGAATATACC  350

seq1  TGATTATACAAGGATGAATTATTATATATTATGATAAAAATTATATACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATACAAGGATGAATTATTATATATTATGATAAAAATTATATACTT  400

seq1  AAATATAACAATAGATCTAGGATGGTAAATAGTTTCTTTGGCTCTGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAACAATAGATCTAGGATGGTAAATAGTTTCTTTGGCTCTGACAT  450

seq1  AAAATCATATAGAGGAGAGGTTATACAGCAGGTTGTTATTCAGTGGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCATATAGAGGAGAGGTTATACAGCAGGTTGTTATTCAGTGGAAAA  500

seq1  ACAGCAAACCTGTTCTGTTGAATGCACAGCTGTGCAGGGTGTCAGGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAACCTGTTCTGTTGAATGCACAGCTGTGCAGGGTGTCAGGCATA  550

seq1  GAGTGCATCTGAGAAAGGAATGAACACTGTTCAGTAGTTCTATATGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCATCTGAGAAAGGAATGAACACTGTTCAGTAGTTCTATATGAAGG  600

seq1  GGCAGTCAGATGAGGAATGAGTGGAGCTGGTCCTGTTATCCATGGCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTCAGATGAGGAATGAGTGGAGCTGGTCCTGTTATCCATGGCAGGT  650

seq1  GTTCTCCATGTTCCCCCGTAGATGCCTCAAGCACCACAGGGAACACCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCATGTTCCCCCGTAGATGCCTCAAGCACCACAGGGAACACCTAA  700

seq1  ACCCACAGAGGTTTCTGTTTTCCTACTTACACATAAATACCTATGAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGAGGTTTCTGTTTTCCTACTTACACATAAATACCTATGAAAAG  750

seq1  TTTAATTTATAAATTATGTGCAGTAAGAGATTAACAATAATTAATAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTATAAATTATGTGCAGTAAGAGATTAACAATAATTAATAAAAG  800

seq1  AGACACTTATGACAATATA-TTATAAAATGTATGGCAATGTTTTATCACT  849
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGACACTTATGACAATATATTTATAAAATGTATGGCAATGTTTTATCACT  850

seq1  CTGTG-TTTCTTTAATCTTCCTGTTTGCATGCTCGCACCTTTCCTATACT  898
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTTTCTTTAATCTTCCTGTTTGCATGCTCGCACCTTTCCTATACT  900

seq1  AACCT-AAAGTGATGAAATGCTTGCCTGATGGGACGGCATG-AGGTCAAT  946
      ||||| ||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACCTAAAAGTGATGAAATGCTTGCCTGATGGGACGGCATGAAGGTCAAT  950

seq1  GATACAGGCACTGTGATGTAG-CCTTAGACTA-TTTATTA-CACAAAGGC  993
      ||||||||||||||||||||| |||||||||| ||||||| ||||||| |
seq2  GATACAGGCACTGTGATGTAGTCCTTAGACTATTTTATTACCACAAAGCC  1000

seq1  ACTTAAGCAC-AAACTCTGCGATCCTGTGAAAG-TCAG-TTTGAGAACTG  1040
      |||| ||||| |||||||||||||||||||||| |||| ||||||| |||
seq2  ACTTTAGCACAAAACTCTGCGATCCTGTGAAAGTTCAGTTTTGAGACCTG  1050

seq1  C  1041
      |
seq2  C  1051