BAC Information

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BAC

Clone NameB6Ng01-280P17
Chromosome18 (Build37)
Map Location 23,052,175 - 23,138,357
singlet/doubletdoublet
Overlap geneNol4
Upstream gene4921528I01Rik, LOC546708, LOC100040547, Asxl3
Downstream geneLOC100040579, LOC665797, Dtna, Mapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280P17.bB6Ng01-280P17.g
ACCGA080577GA080578
length1,1821,011
definitionB6Ng01-280P17.b B6Ng01-280P17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,052,175 - 23,053,338)(23,137,346 - 23,138,357)
sequence
gaattcacacagtctactggaaaataaaatcaagacaaacttatttctct
ctaatgaatatacttacacacatagatcctaattttatatacaaatacat
gcatatatgtaaacatatatgtgtgtacacacacacatattatatatata
ttaaacctaagggtcactcaaccattcacagttcatttttcttaaaatca
atagtaacaattcagcatctaaacacatgaaggaaagaaacaaaaaacaa
aaaatcacaaactatgggctatcctatccatgagtaggattaaattcaca
aaataaatgacactgaaatgaaagagaagaaagtttacatccattcattt
gagcaactttattataaacctgtgtaaaagggaaaattatttacagaaac
attctatttgtagacctctagtggtgatttgagtaactgtcaaatttcct
atcctccagtcctgcctaagtcaatataatatgtaagtattccaggatat
tcctttccacagagataatgcaagtactgatggatagctgtttctatatt
tgggaagccaagaaaaataaaactagttcctaagtaagttgatactaagc
catcaaataaaatattattttttattacgtattttcctcaattacatttc
caatgctatcccaaaagtcccccacaccctcccccccactcccctaccca
cccattcccatttatacttaataacatttaaaatctatagattttaaatt
ttccataaataatattcatttattctttcttctcatcttagttacttgaa
atctgttgttttactaatctgaaaacaatgttagccaacatttaaacacg
caagcaataaatttcatgattttcctttgtagatgagactaatgtttata
tctatctttaagttagaaaagatctgggaattgattttgaagaaagggta
tcattaacactatcagtaatagacatagttagaagattattcatataatg
gacataaactgggttcatcattaaaaagaagaaattgttctcagtcaaga
ttaattattgtactgggcttattcttatacgacaattttttgttgtctgc
taaattaagcatttgtcaacttggtacagggtaccctcagtcaggttatt
tctaaaataggatggtaaattctgcaaggcat

gaattcatgtaaataaggaaaagacaagttaaaaactgagcaactgatga
gaaattcaggaagccaggtctatgccaatgataaatacagatagttatta
atctgcacttcagcctcaagtcagcaaaaacaagcaagttaaagtcagca
ctatcccatgagagaaaggcagtgactgaatgacgtcatcactcccatca
gagaatgacaggatgattaacaccccaggtgtcgggaatgttgaacaagg
aggatgtacacttactgctacagggaccgtgaactgatacggcctcttga
atgcgctcttcagcgttatctagaaaagttaaatacaggctggagagatg
gcatagaagataatgtacttgctgctcttataaaggacttgggtccagtt
cctaggacctacataacaccacataactgtccacaacacaaattccaggg
aatctaagaatctcttcaggactctacaggcttctgcatgcatgagtatg
cgtaaattcacacaagcacatacacattaaaatagtaagagccagaggag
atgtaggacaccaaggaaacgggatcctctatgtcaacatgattaaagat
cataaaagctcacagagactgaagcagcatccccagggtctacacaggtc
tgcaccaggtcctctgcatacgtattatggctctcactttagtgtttttt
ttttttatggaactcctgagtgtatgaatgagtgggtctctgtggtttcc
caattcataccttgttggggtgtggagtgccacttgggcaggtgaaattc
agatgctagatgcatttaccctctgcccgcctgccgttggttctgggctc
aagggaagagctgatacactgttcagtggcgtgtgagaatgcagcctaag
atgtgggagccctaagatggggttccctgacatccagtagaggatttgga
actgagggtcaagagtccaacagcatgcagagaagctcgtgggggggggg
ggtaagggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23052175_23053338
seq2: B6Ng01-280P17.b_51_1232

seq1  GAATTCACACAGTCTACTGGAAAATAAAATCAAGACAAACTTATTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAGTCTACTGGAAAATAAAATCAAGACAAACTTATTTCTCT  50

seq1  CTAATGAATATACTTACACACATAGATCCTAATTTTATATACAAATACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAATATACTTACACACATAGATCCTAATTTTATATACAAATACAT  100

seq1  GCATATATGTAAACATATATGTGTGTACACACACACATATTATATATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATATGTAAACATATATGTGTGTACACACACACATATTATATATATA  150

seq1  TTAAACCTAAGGGTCACTCAACCATTCACAGTTCATTTTTCTTAAAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCTAAGGGTCACTCAACCATTCACAGTTCATTTTTCTTAAAATCA  200

seq1  ATAGTAACAATTCAGCATCTAAACACATGAAGGAAAGAAACAAAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAACAATTCAGCATCTAAACACATGAAGGAAAGAAACAAAAAACAA  250

seq1  AAAATCACAAACTATGGGCTATCCTATCCATGAGTAGGATTAAATTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACAAACTATGGGCTATCCTATCCATGAGTAGGATTAAATTCACA  300

seq1  AAATAAATGACACTGAAATGAAAGAGAAGAAAGTTTACATCCATTCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGACACTGAAATGAAAGAGAAGAAAGTTTACATCCATTCATTT  350

seq1  GAGCAACTTTATTATAAACCTGTGTAAAAGGGAAAATTATTTACAGAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACTTTATTATAAACCTGTGTAAAAGGGAAAATTATTTACAGAAAC  400

seq1  ATTCTATTTGTAGACCTCTAGTGGTGATTTGAGTAACTGTCAAATTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTTGTAGACCTCTAGTGGTGATTTGAGTAACTGTCAAATTTCCT  450

seq1  ATCCTCCAGTCCTGCCTAAGTCAATATAATATGTAAGTATTCCAGGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCAGTCCTGCCTAAGTCAATATAATATGTAAGTATTCCAGGATAT  500

seq1  TCCTTTCCACAGAGATAATGCAAGTACTGATGGATAGCTGTTTCTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCACAGAGATAATGCAAGTACTGATGGATAGCTGTTTCTATATT  550

seq1  TGGGAAGCCAAGAAAAATAAAACTAGTTCCTAAGTAAGTTGATACTAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCCAAGAAAAATAAAACTAGTTCCTAAGTAAGTTGATACTAAGC  600

seq1  CATCAAATAAAATATTATTTTTTATTACGTATTTTCCTCAATTACATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATAAAATATTATTTTTTATTACGTATTTTCCTCAATTACATTTC  650

seq1  CAATGCTATCCCAAAAGTCCCCCACACCCTCCCCCCCACTCCCCTACCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTATCCCAAAAGTCCCCCACACCCTCCCCCCCACTCCCCTACCCA  700

seq1  CCCATTCCCATTTATACTTAATAACATTTAAAATCTATAGATTTT-AATT  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCCATTCCCATTTATACTTAATAACATTTAAAATCTATAGATTTTAAATT  750

seq1  TTCCATAAATAATATTCATTTATTCTTTCTTCTCATCTTAGGTTACTTGA  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCCATAAATAATATTCATTTATTCTTTCTTCTCATCTTA-GTTACTTGA  799

seq1  AATCTGTTGTTTTACTAATCTGAAAACAATGTTAGCCAACATTTAAACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTGTTTTACTAATCTGAAAACAATGTTAGCCAACATTTAAACAC  849

seq1  GCAAGCAATAAA-TTCATGA-TTTCCTTTGTAGATGAGACTAATGTTTAT  897
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  GCAAGCAATAAATTTCATGATTTTCCTTTGTAGATGAGACTAATGTTTAT  899

seq1  ATCTATCTTTAAGTTAG-AAAGATCTGGAAATTGATTTTGAAG-AAGGGT  945
      ||||||||||||||||| |||||||||| |||||||||||||| ||||||
seq2  ATCTATCTTTAAGTTAGAAAAGATCTGGGAATTGATTTTGAAGAAAGGGT  949

seq1  ATCA-TAACACTATCAGT-ATAGACATAGTTAG-AGA-TATTCATATTAA  991
      |||| ||||||||||||| |||||||||||||| ||| |||||||| |||
seq2  ATCATTAACACTATCAGTAATAGACATAGTTAGAAGATTATTCATA-TAA  998

seq1  TGGACATAAACTGGG-TCATCATTAAAA--GAGAAAT--GTCTCAGTC-A  1035
      ||||||||||||||| ||||||||||||   ||||||   |||||||| |
seq2  TGGACATAAACTGGGTTCATCATTAAAAAGAAGAAATTGTTCTCAGTCAA  1048

seq1  GATTAATTA-TGTACTGG--CTATTCTTATTAAGGAC-ATTTTTTG-TGT  1080
      ||||||||| ||||||||   |||||||||  | ||| |||||||| |||
seq2  GATTAATTATTGTACTGGGCTTATTCTTAT--ACGACAATTTTTTGTTGT  1096

seq1  CTTGCTAATATAGGCATTTGTCCACTT-GTACAGGGTACCTTCAGTCAGT  1129
      | ||||||  || ||||||||| |||| |||||||||||| |||||||| 
seq2  C-TGCTAAATTAAGCATTTGTCAACTTGGTACAGGGTACCCTCAGTCAG-  1144

seq1  TTTATTTCT-AAATA-GATGTTATATTCTGC-AGGCAT  1164
       |||||||| ||||| |||| || ||||||| ||||||
seq2  GTTATTTCTAAAATAGGATGGTAAATTCTGCAAGGCAT  1182


seq1: chr18_23137346_23138357
seq2: B6Ng01-280P17.g_65_1075 (reverse)

seq1  CCTCCCTTA--CCCCCCCCCCACGGGCTTCTCTTTGCATGCTGTGGGACT  48
      | |||||||  ||||||||||||| |||||||  |||||||||| |||||
seq2  CTTCCCTTACCCCCCCCCCCCACGAGCTTCTC--TGCATGCTGTTGGACT  48

seq1  CTTGACCCTCAGTTCCCAAATCCTCTACTGGATGTCAGGGAACCCCATCT  98
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTGACCCTCAGTT-CCAAATCCTCTACTGGATGTCAGGGAACCCCATCT  97

seq1  TAGGGCTCCCACATCTTAGGCTGCATTCTCACACGCCACTGAACAGTGTA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTCCCACATCTTAGGCTGCATTCTCACACGCCACTGAACAGTGTA  147

seq1  TCAGCTCTTCCCTTGAGCCCAGAACCAACGGCAGGCGGGCAGAGGGTAAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCTTCCCTTGAGCCCAGAACCAACGGCAGGCGGGCAGAGGGTAAA  197

seq1  TGCATCTAGCATCTGAATTTCACCTGCCCAAGTGGCACTCCACACCCCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTAGCATCTGAATTTCACCTGCCCAAGTGGCACTCCACACCCCAA  247

seq1  CAAGGTATGAATTGGGAAACCACAGAGACCCACTCATTCATACACTCAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTATGAATTGGGAAACCACAGAGACCCACTCATTCATACACTCAGG  297

seq1  AGTTCCATAAAAAAAAAAAACACTAAAGTGAGAGCCATAATACGTATGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCATAAAAAAAAAAAACACTAAAGTGAGAGCCATAATACGTATGCA  347

seq1  GAGGACCTGGTGCAGACCTGTGTAGACCCTGGGGATGCTGCTTCAGTCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACCTGGTGCAGACCTGTGTAGACCCTGGGGATGCTGCTTCAGTCTC  397

seq1  TGTGAGCTTTTATGATCTTTAATCATGTTGACATAGAGGATCCCGTTTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTTTTATGATCTTTAATCATGTTGACATAGAGGATCCCGTTTCC  447

seq1  TTGGTGTCCTACATCTCCTCTGGCTCTTACTATTTTAATGTGTATGTGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTCCTACATCTCCTCTGGCTCTTACTATTTTAATGTGTATGTGCT  497

seq1  TGTGTGAATTTACGCATACTCATGCATGCAGAAGCCTGTAGAGTCCTGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAATTTACGCATACTCATGCATGCAGAAGCCTGTAGAGTCCTGAA  547

seq1  GAGATTCTTAGATTCCCTGGAATTTGTGTTGTGGACAGTTATGTGGTGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTTAGATTCCCTGGAATTTGTGTTGTGGACAGTTATGTGGTGTT  597

seq1  ATGTAGGTCCTAGGAACTGGACCCAAGTCCTTTATAAGAGCAGCAAGTAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGTCCTAGGAACTGGACCCAAGTCCTTTATAAGAGCAGCAAGTAC  647

seq1  ATTATCTTCTATGCCATCTCTCCAGCCTGTATTTAACTTTTCTAGATAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTCTATGCCATCTCTCCAGCCTGTATTTAACTTTTCTAGATAAC  697

seq1  GCTGAAGAGCGCATTCAAGAGGCCGTATCAGTTCACGGTCCCTGTAGCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGAGCGCATTCAAGAGGCCGTATCAGTTCACGGTCCCTGTAGCAG  747

seq1  TAAGTGTACATCCTCCTTGTTCAACATTCCCGACACCTGGGGTGTTAATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTACATCCTCCTTGTTCAACATTCCCGACACCTGGGGTGTTAATC  797

seq1  ATCCTGTCATTCTCTGATGGGAGTGATGACGTCATTCAGTCACTGCCTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTCATTCTCTGATGGGAGTGATGACGTCATTCAGTCACTGCCTTT  847

seq1  CTCTCATGGGATAGTGCTGACTTTAACTTGCTTGTTTTTGCTGACTTGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATGGGATAGTGCTGACTTTAACTTGCTTGTTTTTGCTGACTTGAG  897

seq1  GCTGAAGTGCAGATTAATAACTATCTGTATTTATCATTGGCATAGACCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGTGCAGATTAATAACTATCTGTATTTATCATTGGCATAGACCTG  947

seq1  GCTTCCTGAATTTCTCATCAGTTGCTCAGTTTTTAACTTGTCTTTTCCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGAATTTCTCATCAGTTGCTCAGTTTTTAACTTGTCTTTTCCTT  997

seq1  ATTTACATGAATTC  1012
      ||||||||||||||
seq2  ATTTACATGAATTC  1011


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