BAC Information

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BAC

Clone NameB6Ng01-282G23
Chromosome18 (Build37)
Map Location 49,476,375 - 49,477,480
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042323, LOC545470
Downstream geneDtwd2, Dmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282G23.bB6Ng01-282G23.g
ACCGA081652GA081653
length1,111546
definitionB6Ng01-282G23.b B6Ng01-282G23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttttgctttttgtcctgtctaatggctctctttcatccttttg
tttattatatagtatatatttagttcttatatattattattttttgtttt
ttttgttttttcaagacggggtttctttggttgttctggaactcactctg
tagaccagggtggcctcaaactcagaaatctgcctgcctctgcctcccaa
gtgctgggattgaaggtgtgtaccaccactgcccagcttatatattcaga
tattatgaatagcttatatatttagtatttttgtctactttcttgcttcc
tgttttatgtgttattacctatcaccctcttgtagctttatatttaaatg
tttttgcacttttattttacatatatagatgttttgccttcttgtatgtc
tgtataccgtgtgaagaatgagtgccctcaggtgccagaacagggtgtca
aagcccctggaactagagtcacaggcagttgtgatccaacatatagaaac
tgggagctgaactgagatcctctgcaagagcagcaaccattgttagttgc
tcaggcccttaacttccttcctctagtggccttttgagaggaggtgggag
gactatagatccatgtaaagaggtaagtctgaaatgacctgtaatgtgat
tgggtaaaagttccttttcagaatccatcatcttttagaattctgagtta
cctttttttttttttaggataaaatgttctatagatctgttaaatccatt
ttgtttcataacttctgttagttttttctccaccaatgctctgaaacgct
gtttatatctcaacccccttctctctctctcttccttatcttataatgct
tgggggattagaacccagggcttcacacagaccaggcaagggctcctacc
accaaggtacacccaaccctatttttctaaaatgacatattaatttttat
ttgtgactactgcctgcatgtatgcatgcacattacatgtgtgcctcatg
ctcatagagcccaggagaagccatacagatgactgtgtgtccctgtgggt
gcctgaaacggaaatagaagttaggttgagcccaccttttcagttcccta
ggttcattttc

aataaagcaatagaaacattgaaaaggattcaacctgaaataaaggtgga
attgaaaagcctaataactcaactctcctaccttgcaagtaggagagtcc
aaaagaggactcaaagataaattagaggatatagatgaaataaatgaaga
atgtgaagaaaaaaaaaaacaggaaaggagcaaagaaatgtatataccat
agggagggaaggggctgcaaattatacagatcgaagtaatcaatgacata
gatgagaacttcaataatatcacaaaggaaaactcgaaactaaagaaagg
cacacccatacctataaacaaatcacacacaacaccaaatatacaataca
aagaaagaaaaccaccatgacatatcatggttaaacaggaagcatacaga
acaaagaaagtgtactgaaagctgcaagagaaaagaaacacaagattaga
tagatagatagatagatagatagatagatagatagatagatagatagaca
gaaagatagatatagatatagatatagatatagatatagatataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49476375_49477480
seq2: B6Ng01-282G23.b_44_1154 (reverse)

seq1  GAAAATGAACCTAGGGACCTG--AAGGGTGGCTCAACCTAAACTTCTA-T  47
      ||||||||||||||||| |||  ||||  |||||||||| |||||||| |
seq2  GAAAATGAACCTAGGGAACTGAAAAGGTGGGCTCAACCT-AACTTCTATT  49

seq1  TCCGTTCTCA-GCACCCACAGGGACACACAGTCATCTGTAATGCCTTCTC  96
      |||||| ||| |||||||||||||||||||||||||||| ||| ||||||
seq2  TCCGTT-TCAGGCACCCACAGGGACACACAGTCATCTGT-ATGGCTTCTC  97

seq1  CTGGCCTCTATGAGCATGAGGCACACATGTAATGTGCATGCATACATGCA  146
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTCTATGAGCATGAGGCACACATGTAATGTGCATGCATACATGCA  147

seq1  GGCAAGTAGTCACAAAATAAAAATTAATATGTCATTTTAG-AAAATAGGG  195
      ||| ||||||||| |||||||||||||||||||||||||| |||||||||
seq2  GGC-AGTAGTCAC-AAATAAAAATTAATATGTCATTTTAGAAAAATAGGG  195

seq1  TTGGGTGTACCTTGGTGGTAGGAGCCCTTGCCTGGTCTGTGTGAAGCCCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGTACCTTGGTGGTAGGAGCCCTTGCCTGGTCTGTGTGAAGCCCT  245

seq1  GGGTTCT-ATCCCC--AGCATTATAAGATAAGGAAGAGAGAGAGAGAAGG  292
      ||||||| ||||||  ||||||||||||||||||||||||||||||||||
seq2  GGGTTCTAATCCCCCAAGCATTATAAGATAAGGAAGAGAGAGAGAGAAGG  295

seq1  GGGTTGAGATAT-AACAGCGTTTCAGAGCATTGGTGGAGAAAAAACTAAC  341
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGGTTGAGATATAAACAGCGTTTCAGAGCATTGGTGGAGAAAAAACTAAC  345

seq1  AGAAGTTATGAAAC-AAATGGATTTAACAGATCTATAGAACATTTTATCC  390
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAAGTTATGAAACAAAATGGATTTAACAGATCTATAGAACATTTTATCC  395

seq1  TAAAAAAAAAAAAAGGTAACTCAGAATTCTAAAAGATGATGGATTCTGAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAAAAGGTAACTCAGAATTCTAAAAGATGATGGATTCTGAA  445

seq1  AAGGAACTTTTACCCAATCACATTACAGGTCATTTCAGACTTACCTCTTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTTTTACCCAATCACATTACAGGTCATTTCAGACTTACCTCTTT  495

seq1  ACATGGATCTATAGTCCTCCCACCTCCTCTCAAAAGGCCACTAGAGGAAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGATCTATAGTCCTCCCACCTCCTCTCAAAAGGCCACTAGAGGAAG  545

seq1  GAAGTTAAGGGCCTGAGCAACTAACAATGGTTGCTGCTCTTGCAGAGGAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTAAGGGCCTGAGCAACTAACAATGGTTGCTGCTCTTGCAGAGGAT  595

seq1  CTCAGTTCAGCTCCCAGTTTCTATATGTTGGATCACAACTGCCTGTGACT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCAGCTCCCAGTTTCTATATGTTGGATCACAACTGCCTGTGACT  645

seq1  CTAGTTCCAGGGGCTTTGACACCCTGTTCTGGCACCTGAGGGCACTCATT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCCAGGGGCTTTGACACCCTGTTCTGGCACCTGAGGGCACTCATT  695

seq1  CTTCACACGGTATACAGACATACAAGAAGGCAAAACATCTATATATGTAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACACGGTATACAGACATACAAGAAGGCAAAACATCTATATATGTAA  745

seq1  AATAAAAGTGCAAAAACATTTAAATATAAAGCTACAAGAGGGTGATAGGT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGTGCAAAAACATTTAAATATAAAGCTACAAGAGGGTGATAGGT  795

seq1  AATAACACATAAAACAGGAAGCAAGAAAGTAGACAAAAATACTAAATATA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACACATAAAACAGGAAGCAAGAAAGTAGACAAAAATACTAAATATA  845

seq1  TAAGCTATTCATAATATCTGAATATATAAGCTGGGCAGTGGTGGTACACA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTATTCATAATATCTGAATATATAAGCTGGGCAGTGGTGGTACACA  895

seq1  CCTTCAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTTG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTTG  945

seq1  AGGCCACCCTGGTCTACAGAGTGAGTTCCAGAACAACCAAAGAAACCCCG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACCCTGGTCTACAGAGTGAGTTCCAGAACAACCAAAGAAACCCCG  995

seq1  TCTTGAAAAAACAAAAAAAACAAAAAATAATAATATATAAGAACTAAATA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAAAACAAAAAAAACAAAAAATAATAATATATAAGAACTAAATA  1045

seq1  TATACTATATAATAAACAAAAGGATGAAAGAGAGCCATTAGACAGGACAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTATATAATAAACAAAAGGATGAAAGAGAGCCATTAGACAGGACAA  1095

seq1  AAAGCAAAAGGAATTC  1106
      ||||||||||||||||
seq2  AAAGCAAAAGGAATTC  1111


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