BAC Information

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BAC

Clone NameB6Ng01-282P22
Chromosome18 (Build37)
Map Location 51,052,217 - 51,053,370
singlet/doubletsinglet
Overlap genenone
Upstream geneDmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93, Hdhd1a, LOC100042373
Downstream geneLOC100042385, Prr16, EG240289
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282P22.bB6Ng01-282P22.g
ACCGA082066GA082067
length1,1581,149
definitionB6Ng01-282P22.b B6Ng01-282P22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgtagagtgtgggcctacttaagccagatcttcaaagtcaa
gctcttcttgcatgatgtagggatatgccacctgccaataagatacgatg
ggatgaaagcatgtctatccatcatctggagcaatgggtttgtagtgagt
ttaaaacccctttggtcagcctaccttagctccagatgaatcaataatcc
ccatgacacaaagaagcaggatatagcagaaatttaggatacgcagagag
aacaaataataaacccaacttactctattttcaaatctacatctgtaaga
gatgagttatcaatgatacatttaggaaacaactttaagactggcattat
caacgtaatgaaaatgtacctgtcctaaaacaatgtaaggttgacaaatg
ctatgtgcttccaaagttccaatctccatcaaacagcatccgtgagacag
attcatgatgattaccatgtgacatcttgaagggacaatttttttttttt
gttatggttatctttccacacagctgaagtgacaagctaatatatagtct
taaagccactcaagatgatagaacatcatggattatccccagtcagctcc
agtattttagggtgtgagaaggctattttttgttctttgttttttaaagc
agattccatcttgtttcatacaagataaagagcaacacattaagaagata
ttatttttattttcttaactccttatatttccacaaatgttatctctgag
tttttccatttcttctagagttttcacatccctgaattaaacttcatatt
aacaaatataattactgtgttatttgcaataagacaaataatagtattat
atattaactacaaattatatgcataggatattaagaaaaattatattttt
gaatgttaaatttataaattattaggaactgctataagattcatctaaac
ataagattgttttcctaaaacatacccaaagaaaagctttggtggaaaaa
aaaaaaacactccctgtattttctggccattaaaaatagcctcaaaatgc
ttcttacaacatagagatgttgaacacggtggaatttattttgaacaaca
agaattcctcatttggactggatttagcacaagtctatgaaagcagcctt
tatgtttg
gaattctcacctgcaggaataccaaatggcagagaaacacctgaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacttcactccagtcagaatggctaagatcaaaaactcaggtgacag
cagatgctggcgaggatgtggagaaaggggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccagaggatcccgcaatacctctcctggg
catatatccagaagatgttccaacaggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaagttcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtattcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgttaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagccaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaagtagcaaggagctaaggatctgcacctatagg
tggaacacattatgaactacccagtacccgagctctgactctagctgcat
atttatcaaagatgcctagtcgcatcactgcaaggaagccatgaacttgc
aacttaatggccagtacaggactccaggcctaaaagggcaaggtggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_51052217_51053370
seq2: B6Ng01-282P22.b_48_1205

seq1  GAATTCTTTTGTAGAGTGTGGGCCTACTTAAGCCAGATCTTCAAAGTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTAGAGTGTGGGCCTACTTAAGCCAGATCTTCAAAGTCAA  50

seq1  GCTCTTCTTGCATGATGTAGGGATATGCCACCTGCCAATAAGATACGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTTGCATGATGTAGGGATATGCCACCTGCCAATAAGATACGATG  100

seq1  GGATGAAAGCATGTCTATCCATCATCTGGAGCAATGGGTTTGTAGTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAAAGCATGTCTATCCATCATCTGGAGCAATGGGTTTGTAGTGAGT  150

seq1  TTAAAACCCCTTTGGTCAGCCTACCTTAGCTCCAGATGAATCAATAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCCCTTTGGTCAGCCTACCTTAGCTCCAGATGAATCAATAATCC  200

seq1  CCATGACACAAAGAAGCAGGATATAGCAGAAATTTAGGATACGCAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACACAAAGAAGCAGGATATAGCAGAAATTTAGGATACGCAGAGAG  250

seq1  AACAAATAATAAACCCAACTTACTCTATTTTCAAATCTACATCTGTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAATAAACCCAACTTACTCTATTTTCAAATCTACATCTGTAAGA  300

seq1  GATGAGTTATCAATGATACATTTAGGAAACAACTTTAAGACTGGCATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTTATCAATGATACATTTAGGAAACAACTTTAAGACTGGCATTAT  350

seq1  CAACGTAATGAAAATGTACCTGTCCTAAAACAATGTAAGGTTGACAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTAATGAAAATGTACCTGTCCTAAAACAATGTAAGGTTGACAAATG  400

seq1  CTATGTGCTTCCAAAGTTCCAATCTCCATCAAACAGCATCCGTGAGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGCTTCCAAAGTTCCAATCTCCATCAAACAGCATCCGTGAGACAG  450

seq1  ATTCATGATGATTACCATGTGACATCTTGAAGGGACAATTTTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGATGATTACCATGTGACATCTTGAAGGGACAATTTTTTTTTTTT  500

seq1  GTTATGGTTATCTTTCCACACAGCTGAAGTGACAAGCTAATATATAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGTTATCTTTCCACACAGCTGAAGTGACAAGCTAATATATAGTCT  550

seq1  TAAAGCCACTCAAGATGATAGAACATCATGGATTATCCCCAGTCAGCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCACTCAAGATGATAGAACATCATGGATTATCCCCAGTCAGCTCC  600

seq1  AGTATTTTAGGGTGTGAGAAGGCTATTTTTTGTTCTTTGTTTTTTAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTAGGGTGTGAGAAGGCTATTTTTTGTTCTTTGTTTTTTAAAGC  650

seq1  AGATTCCATCTTGTTTCATACAAGATAAAGAGCAACACATTAAGAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCATCTTGTTTCATACAAGATAAAGAGCAACACATTAAGAAGATA  700

seq1  TTATTTTTATTTTCTTAACTCCTTATATTTCCACAAATGTTATCTCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTATTTTCTTAACTCCTTATATTTCCACAAATGTTATCTCTGAG  750

seq1  TTTTTCCATTTCTTCTAGAGTTTTCACATCCCTGAATTAAACTTCATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCATTTCTTCTAGAGTTTTCACATCCCTGAATTAAACTTCATATT  800

seq1  AACAAATATAATTACTGTGTTATTTGCAATAAGACAAATAATAGTATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATATAATTACTGTGTTATTTGCAATAAGACAAATAATAGTATTAT  850

seq1  ATATTAACTACAAATTATATGCATAGGATATTAAGAAAAATTATATTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAACTACAAATTATATGCATAGGATATTAAGAAAAATTATATTTTT  900

seq1  GAATGTTAAATTTATAAATTATTAGGAACTGCTATAAGATTCATCTAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTAAATTTATAAATTATTAGGAACTGCTATAAGATTCATCTAAAC  950

seq1  ATAAGGATG-TTTCCTAAAACATACCCAAAGAAAAGC-TTGGTGG-AAAA  997
      |||||  || ||||||||||||||||||||||||||| ||||||| ||||
seq2  ATAAGATTGTTTTCCTAAAACATACCCAAAGAAAAGCTTTGGTGGAAAAA  1000

seq1  AAAAAAACACTCCCTGTA-TTTCTGGCAATTAAAAATAGGCTCAAAATGC  1046
      |||||||||||||||||| |||||||| ||||||||||| ||||||||||
seq2  AAAAAAACACTCCCTGTATTTTCTGGCCATTAAAAATAGCCTCAAAATGC  1050

seq1  CTCCTAC-ACATAGAGATGTGAAACACGTGGAAATTTATTTTGAACA--C  1093
       || ||| ||||||||||||  ||||||  | |||||||||||||||   
seq2  TTCTTACAACATAGAGATGTTGAACACGGTGGAATTTATTTTGAACAACA  1100

seq1  AGATTTCCTTCAATTTGACTGAGTTTTAGCACAAGTCTATGAGAGGCAGC  1143
      ||| |||| ||| || ||||| | |||||||||||||||||| | |||||
seq2  AGAATTCC-TCATTTGGACTG-GATTTAGCACAAGTCTATGA-AAGCAGC  1147

seq1  CTTTATGTTTG  1154
      |||||||||||
seq2  CTTTATGTTTG  1158