BAC Information

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BAC

Clone NameB6Ng01-283J15
Chromosome18 (Build37)
Map Location 50,062,459 - 50,063,635
singlet/doubletsinglet
Overlap geneDmxl1
Upstream geneDtwd2
Downstream geneTnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93, Hdhd1a, LOC100042373
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283J15.bB6Ng01-283J15.g
ACCGA082523GA082524
length1,179120
definitionB6Ng01-283J15.b B6Ng01-283J15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctggggaagaagctcagtcaggacttacagtcttgctttgtg
aaattctcacagcagtatatcttagtctgttcattcatgggctggcaaca
cactctagtaatgagctatttcggattgtagcccaccccctaaatgaaaa
aatgtggtctgcagtatttggtggaggagcacatgttcccagcaaaggac
aggcaaactcaaaagctttatctggtaagtttttattgtcctgttgtgca
ctccccccacaacaccccgtccgcctcccattctttccttccactctaac
cttcctctcagttctgtctttataagctgaagctttattcattttatggt
aactttgttaaatgtaattacatcttaattttatgtaagaaagttcttgt
tgtacaagaccaccaacaaatactattgtaaaaaatgaagttttaaagtt
tcttgtgcagttttcaatcttttagatattcctatactgataattaaact
atacaatgtagttataatgtctcttagtactaaaatctttatttcttttg
aaatacactttggttttattccataccaaatacagatttttctcttcttt
ctttggcaggaaggcactttgctatgcctagccctcaccaggtagtggta
ttctccatggaatgtgtgggcttttccaaagctctttcagccatcagttc
tcatagccttcccactcttgcaggcaagatcttagctttagaaataggct
cttacagtttagcttgctttatgttgttgtttttcaagggttgcatacag
tggggtagtttgttttgtttggcatttaaggaaaattgacatttctttta
atcaagccatatttttgatttaaaacaatgattagcattttagaaaactg
tttctgctcttccatttaaagtttcaaaatacttgggtttttgatatttt
tttctgtccctttaattataatatttctaagtgtacaaaacccaaaagaa
acaaatgctagtgctgatcatagaaaatcacagtattggcttgaaatgaa
tggaaagcatttccatgagctgcttatgcttgcatatatgactggcctat
agagttttaactttctaggtgtttagaaatttaccatggaaaggtcagtc
ttttaaataacgtcatcctttttactaca

attgagagatgatgcacctaaccctcaagagactggagaccccagggagt
ttagaggtcaggtggggtagggggtgaagacatccatgtggagacagggg
gtgtggaggaggtatgggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_50062459_50063635
seq2: B6Ng01-283J15.b_43_1221

seq1  GAATTCCTCTGGGGAAGAAGCTCAGTCAGGACTTACAGTCTTGCTTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGGGGAAGAAGCTCAGTCAGGACTTACAGTCTTGCTTTGTG  50

seq1  AAATTCTCACAGCAGTATATCTTAGTCTGTTCATTCATGGGCTGGCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTCACAGCAGTATATCTTAGTCTGTTCATTCATGGGCTGGCAACA  100

seq1  CACTCTAGTAATGAGCTATTTCGGATTGTAGCCCACCCCCTAAATGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAGTAATGAGCTATTTCGGATTGTAGCCCACCCCCTAAATGAAAA  150

seq1  AATGTGGTCTGCAGTATTTGGTGGAGGAGCACATGTTCCCAGCAAAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTCTGCAGTATTTGGTGGAGGAGCACATGTTCCCAGCAAAGGAC  200

seq1  AGGCAAACTCAAAAGCTTTATCTGGTAAGTTTTTATTGTCCTGTTGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAACTCAAAAGCTTTATCTGGTAAGTTTTTATTGTCCTGTTGTGCA  250

seq1  CTCCCCCCACAACACCCCGTCCGCCTCCCATTCTTTCCTTCCACTCTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCACAACACCCCGTCCGCCTCCCATTCTTTCCTTCCACTCTAAC  300

seq1  CTTCCTCTCAGTTCTGTCTTTATAAGCTGAAGCTTTATTCATTTTATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTCAGTTCTGTCTTTATAAGCTGAAGCTTTATTCATTTTATGGT  350

seq1  AACTTTGTTAAATGTAATTACATCTTAATTTTATGTAAGAAAGTTCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTTAAATGTAATTACATCTTAATTTTATGTAAGAAAGTTCTTGT  400

seq1  TGTACAAGACCACCAACAAATACTATTGTAAAAAATGAAGTTTTAAAGTT  450
      ||||||||||||||||||||||||||||||                 |||
seq2  TGTACAAGACCACCAACAAATACTATTGTANNNNNNNNNNNNNNNNNGTT  450

seq1  TCTTGTGCAGTTTTCAATCTTTTAGATATTCCTATACTGATAATTAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGCAGTTTTCAATCTTTTAGATATTCCTATACTGATAATTAAACT  500

seq1  ATACAATGTAGTTATAATGTCTCTTAGTACTAAAATCTTTATTTCTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATGTAGTTATAATGTCTCTTAGTACTAAAATCTTTATTTCTTTTG  550

seq1  AAATACACTTTGGTTTTATTCCATACCAAATACAGATTTTTCTCTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACTTTGGTTTTATTCCATACCAAATACAGATTTTTCTCTTCTTT  600

seq1  CTTTGGCAGGAAGGCACTTTGCTATGCCTAGCCCTCACCAGGTAGTGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCAGGAAGGCACTTTGCTATGCCTAGCCCTCACCAGGTAGTGGTA  650

seq1  TTCTCCATGGAATGTGTGGGCTTTTCCAAAGCTCTTTCAGCCATCAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATGGAATGTGTGGGCTTTTCCAAAGCTCTTTCAGCCATCAGTTC  700

seq1  TCATAGCCTTCCCACTCTTGCAGGCAAGATCTTAGCTTTAGAAATAGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCCTTCCCACTCTTGCAGGCAAGATCTTAGCTTTAGAAATAGGCT  750

seq1  CTTACAGTTTAGCTTGCTTTATGTTGTTGTTTTTCAAGGGTTGCATACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTTTAGCTTGCTTTATGTTGTTGTTTTTCAAGGGTTGCATACAG  800

seq1  TGGGGTAGTTTGTTTTGTTTGGCATTTAAGGAAAATTGACATTTCTTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTAGTTTGTTTTGTTTGGCATTTAAGGAAAATTGACATTTCTTTTA  850

seq1  ATCAAGCCATATTTTTGATTTAAAACAATGATTAGCATTTTAGAAAACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGCCATATTTTTGATTTAAAACAATGATTAGCATTTTAGAAAACTG  900

seq1  TTTCTGCTCTTCCA-TTAAAGTTTC-AAATACTT-GGTTTTTGATATTTT  947
      |||||||||||||| |||||||||| |||||||| |||||||||||||||
seq2  TTTCTGCTCTTCCATTTAAAGTTTCAAAATACTTGGGTTTTTGATATTTT  950

seq1  TTTCTGTCCCTTAAATTATAATATTTCTAAGTGTACAAAACCCAAAAGAA  997
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCCCTTTAATTATAATATTTCTAAGTGTACAAAACCCAAAAGAA  1000

seq1  ACAAATGCTAGTGCTGATCATAGAAAATCACAGTA-TGGCTTGAAATGAT  1046
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  ACAAATGCTAGTGCTGATCATAGAAAATCACAGTATTGGCTTGAAATGAA  1050

seq1  TGGGAAAGCATTTCCCATGAGGCTGCTTTATGGTTTGCATATTATGACTG  1096
      | ||||||||||| |||||| ||||| |||| | ||||||| ||||||||
seq2  T-GGAAAGCATTT-CCATGA-GCTGC-TTAT-GCTTGCATA-TATGACTG  1094

seq1  GCTATTAGAGTTTTTAAATTTCTAAGTGTTTAGAA---TACCAT-GAAAA  1142
      ||   ||||| |||||| |||||| ||||||||||   |||||| |||| 
seq2  GCCTATAGAG-TTTTAACTTTCTAGGTGTTTAGAAATTTACCATGGAAAG  1143

seq1  GTAAATCTTTTAAATAAATGTATCC-TTTTACTACA  1177
      || | ||||||||||||    |||| ||||||||||
seq2  GTCAGTCTTTTAAATAACGTCATCCTTTTTACTACA  1179


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