BAC Information

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BAC

Clone NameB6Ng01-285G17
Chromosome18 (Build37)
Map Location 72,443,428 - 72,556,358
singlet/doubletdoublet
Overlap geneDcc
Upstream genenone
Downstream geneLOC629684, LOC100043411, LOC100042955
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285G17.bB6Ng01-285G17.g
ACCGA083874GA083875
length1,1591,132
definitionB6Ng01-285G17.b B6Ng01-285G17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,443,428 - 72,444,586)(72,555,240 - 72,556,358)
sequence
gaattcacttgggtgtatttctaaactgcataactatcattaattgtttt
agcaactttgggaattgacctccatggtgacattgcaaaatgcttagttt
tatgtgatcttatctatagtttacaaacttacaagagataacaaatggtg
acaggattacataacacctttatcacatttaaatgtttactttaaccata
aggacacagggagtattagatgaacagacattcatgttagactatggtaa
gatttgaatccatcagccagatccaaaggaagcagtaactaaagatcacc
ccttgtgcatatactgacaatgctcttctctttgttattgttagtttgtt
tttgtttgtttggtttggtttggttttgaggcagggtttctgaaactttc
ttcgtagagcaggtttgtctcaaactcttagatctccatatctctgcctg
ctaagtgctgttgcatgatcactgcccagaccatacaacactattcttaa
ctgtagggccacctggggaaatctatttactcttaacaatgatagaataa
aggtacagtcactcttttcttactatttctgcattggtgttaaagtaata
gtgtaacaaagtttgctctctgtaatctcagcaggatttcttccttcacc
aagttcacagttgcagaaatatgaatgtagaatgtttgatgctacagaaa
tattttataaatctgtgtcaagtaaaaagaggagaaagagatagacagaa
tcaatgactataatttttctcattttatttccaagtgtattttggccact
tacttacctaagagaatggctgctctccattttgctgacagcattttcca
taattgcagttaatctgacatggagaagctatgattactctagaatgccc
atatctatttacttcatgaaaatgctacattcctaattctgtaatttctt
tctaatagatgaatgaatgtctctgggttttgggatagtaagtcaatacc
atatttttgtcagcaaaattccacacattactattgcctctttcatcaag
ggttcttaatattaccaagtcagaagaacctgttcttttctggcaagcaa
tttgtctgggtgtgcaatattcctagtacagaaaattaggcattgaagcc
tgtgaattc
gaattctcattctctgactctctcataaagaaaaggctgtaaatacaatc
tcatctcctcttaggtggtcattaccaaaattgaagtatttccttttcca
ggtacttagtgaagatgagatatagccaagaagaagggaaaaaaaaaaac
acaggtgaatttaaaaccaagatctgttgtgtggcaggattatataagcc
ttactgtttctgttctaaagttgacttgctggtaaatttcacattgcatt
ttcccaatcccctatatttcttaaagaggacccaatagaaaatacagggg
tggagatagcaacaaggaagagcacattggggaaaaaagaacatttggta
aatatattaaaataataataaataaaaagaaaatacctttcagaatgctg
ttataccaaatgagatattagttgtcctgtaaaatcttcagaatatacaa
ctaactatctttgggaacaattctctgggaaaagcactttttttaaaaat
gtactttctttagacacaaacacaataaagaaaaacaatctcagttgaaa
attggatgtttatcattttttccacatgtcttaagaaaaaaaaatcacat
attctgggactacaaaaaatgtaaacaaatacatggagttacaactattg
aatacaattctaattaccctatagtttctatggaaccaggaaatagactg
acaaagatatctatgttaatgttctatatgcaatttaaagaatgtgatac
tgttctctatgaatggctatttcatacgagtcaaaagagagcaggacata
actgctaggaagtctggctatgtgttccaaaaaagagaattaatggatgg
tacgtacatggatggagcataatttttttttccagttaaacatctatgaa
taaaatatataccataatcttgaacagttcaacgaaactatacagtcata
ccaaattatcaggaaaagttataacagaatgttgagcatccctcatattt
gtatcagtgaagacacagctttgtttgggattcatgttgacagcccacag
aagagaaggacacgaaacagttggaatattcttatgttcagtcaatttta
aggtgcctaataaaccacatttttcagagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_72443428_72444586
seq2: B6Ng01-285G17.b_49_1207

seq1  GAATTCACTTGGGTGTATTTCTAAACTGCATAACTATCATTAATTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGGTGTATTTCTAAACTGCATAACTATCATTAATTGTTTT  50

seq1  AGCAACTTTGGGAATTGACCTCCATGGTGACATTGCAAAATGCTTAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTTTGGGAATTGACCTCCATGGTGACATTGCAAAATGCTTAGTTT  100

seq1  TATGTGATCTTATCTATAGTTTACAAACTTACAAGAGATAACAAATGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGATCTTATCTATAGTTTACAAACTTACAAGAGATAACAAATGGTG  150

seq1  ACAGGATTACATAACACCTTTATCACATTTAAATGTTTACTTTAACCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATTACATAACACCTTTATCACATTTAAATGTTTACTTTAACCATA  200

seq1  AGGACACAGGGAGTATTAGATGAACAGACATTCATGTTAGACTATGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACAGGGAGTATTAGATGAACAGACATTCATGTTAGACTATGGTAA  250

seq1  GATTTGAATCCATCAGCCAGATCCAAAGGAAGCAGTAACTAAAGATCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAATCCATCAGCCAGATCCAAAGGAAGCAGTAACTAAAGATCACC  300

seq1  CCTTGTGCATATACTGACAATGCTCTTCTCTTTGTTATTGTTAGTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGCATATACTGACAATGCTCTTCTCTTTGTTATTGTTAGTTTGTT  350

seq1  TTTGTTTGTTTGGTTTGGTTTGGTTTTGAGGCAGGGTTTCTGAAACTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGGTTTGGTTTGGTTTTGAGGCAGGGTTTCTGAAACTTTC  400

seq1  TTCGTAGAGCAGGTTTGTCTCAAACTCTTAGATCTCCATATCTCTGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTAGAGCAGGTTTGTCTCAAACTCTTAGATCTCCATATCTCTGCCTG  450

seq1  CTAAGTGCTGTTGCATGATCACTGCCCAGACCATACAACACTATTCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGCTGTTGCATGATCACTGCCCAGACCATACAACACTATTCTTAA  500

seq1  CTGTAGGGCCACCTGGGGAAATCTATTTACTCTTAACAATGATAGAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGGCCACCTGGGGAAATCTATTTACTCTTAACAATGATAGAATAA  550

seq1  AGGTACAGTCACTCTTTTCTTACTATTTCTGCATTGGTGTTAAAGTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAGTCACTCTTTTCTTACTATTTCTGCATTGGTGTTAAAGTAATA  600

seq1  GTGTAACAAAGTTTGCTCTCTGTAATCTCAGCAGGATTTCTTCCTTCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACAAAGTTTGCTCTCTGTAATCTCAGCAGGATTTCTTCCTTCACC  650

seq1  AAGTTCACAGTTGCAGAAATATGAATGTAGAATGTTTGATGCTACAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCACAGTTGCAGAAATATGAATGTAGAATGTTTGATGCTACAGAAA  700

seq1  TATTTTATAAATCTGTGTCAAGTAAAAAGAGGAGAAAGAGATAGACAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATAAATCTGTGTCAAGTAAAAAGAGGAGAAAGAGATAGACAGAA  750

seq1  TCAATGACTATAATTTTTCTCATTTTATTTCCAAGTGTATTTTGGCCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGACTATAATTTTTCTCATTTTATTTCCAAGTGTATTTTGGCCACT  800

seq1  TACTTACCTAAGAGAATGGCTGCTCTCCATTTTGCTGACAGCATTTTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACCTAAGAGAATGGCTGCTCTCCATTTTGCTGACAGCATTTTCCA  850

seq1  TAATTGCAGTTAATCTGACATGGAGAAGCTATGATTACTCTAGAATGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCAGTTAATCTGACATGGAGAAGCTATGATTACTCTAGAATGCCC  900

seq1  ATATCTATTTACTTCATGAAAATGCTACATTCCTAATTCTGTAATTTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTATTTACTTCATGAAAATGCTACATTCCTAATTCTGTAATTTCTT  950

seq1  TCTTAATAGATGAATGAATGTCTCTGGGTTTTGGAATAGTAAGTCAATAC  1000
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TC-TAATAGATGAATGAATGTCTCTGGGTTTTGGGATAGTAAGTCAATAC  999

seq1  CATATTTTTGTCAGCAAAATT-CACACATTACTA-TGCCTCTCCCATCAA  1048
      ||||||||||||||||||||| |||||||||||| |||||||  ||||||
seq2  CATATTTTTGTCAGCAAAATTCCACACATTACTATTGCCTCTTTCATCAA  1049

seq1  GGG-TCTT-ATATTACCAAAGTCAAGAAGAA-CTG-TCTTTCTGGGCAAA  1094
      ||| |||| |||||||| ||||| ||||||| ||| |||||   ||||| 
seq2  GGGTTCTTAATATTACC-AAGTC-AGAAGAACCTGTTCTTTTCTGGCAAG  1097

seq1  GCATTTGTCCTGGTG-GCATATAATTTCCTAATACAGAAAATTA-GCATT  1142
        |||||||  |||| ||| |||  |||||| |||||||||||| |||||
seq2  CAATTTGTCTGGGTGTGCA-ATA--TTCCTAGTACAGAAAATTAGGCATT  1144

seq1  AGAAGCCTGTGGAATTC  1159
       ||||||||| ||||||
seq2  -GAAGCCTGT-GAATTC  1159

seq1: chr18_72555240_72556358
seq2: B6Ng01-285G17.g_70_1201 (reverse)

seq1  AATCTTCTGAAAAATGTG--TTATTA-GCACCCTAAAA-TGACTG-ACAT  45
      |||| |||||||||||||  |||||| ||||| ||||| |||||| ||||
seq2  AATC-TCTGAAAAATGTGGTTTATTAGGCACCTTAAAATTGACTGAACAT  49

seq1  A--GATATCCCAACTGTTTCGTGTCCTTCTC-TCTGT-GGCTGTCAACAT  91
      |   |||| |||||||||||||||||||||| ||||| ||||||||||||
seq2  AAGAATATTCCAACTGTTTCGTGTCCTTCTCTTCTGTGGGCTGTCAACAT  99

seq1  GAATTCCAAAC-AAGCTGTGTCTTCACTGATAC-AATATGA-GGATGCTC  138
      |||| |||||| ||||||||||||||||||||| ||||||| ||||||||
seq2  GAATCCCAAACAAAGCTGTGTCTTCACTGATACAAATATGAGGGATGCTC  149

seq1  AACATTCTGTTAT-ACTTTTCCTGATAATTT-GTATGACTGTATAGTTTC  186
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  AACATTCTGTTATAACTTTTCCTGATAATTTGGTATGACTGTATAGTTTC  199

seq1  GTTTGAACTGTTCAAGATTATGGTATATATTTTATTCATAGATGTTTAAC  236
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TTGAACTGTTCAAGATTATGGTATATATTTTATTCATAGATGTTTAAC  248

seq1  TGG-AAAAAAAATTATGCTCCATCCATGTACGTACCATCCATTAATTCTC  285
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAAAATTATGCTCCATCCATGTACGTACCATCCATTAATTCTC  298

seq1  TTTTTTGGAACACATAGCCAGACTTCCTAGCAGTTATGTCCTGCTCTCTT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGAACACATAGCCAGACTTCCTAGCAGTTATGTCCTGCTCTCTT  348

seq1  TTGACTCGTATGAAATAGCCATTCATAGAGAACAGTATCACATTCTTTAA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCGTATGAAATAGCCATTCATAGAGAACAGTATCACATTCTTTAA  398

seq1  ATTGCATATAGAACATTAACATAGATATCTTTGTCAGTCTATTTCCTGGT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATATAGAACATTAACATAGATATCTTTGTCAGTCTATTTCCTGGT  448

seq1  TCCATAGAAACTATAGGGTAATTAGAATTGTATTCAATAGTTGTAACTCC  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGAAACTATAGGGTAATTAGAATTGTATTCAATAGTTGTAACTCC  498

seq1  ATGTATTTGTTTACATTTTTTGTAGTCCCAGAATATGTGATTTTTTTTTC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTGTTTACATTTTTTGTAGTCCCAGAATATGTGATTTTTTTTTC  548

seq1  TTAAGACATGTGGAAAAAATGATAAACATCCAATTTTCAACTGAGATTGT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACATGTGGAAAAAATGATAAACATCCAATTTTCAACTGAGATTGT  598

seq1  TTTTCTTTATTGTGTTTGTGTCTAAAGAAAGTACATTTTTAAAAAAAGTG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTATTGTGTTTGTGTCTAAAGAAAGTACATTTTTAAAAAAAGTG  648

seq1  CTTTTCCCAGAGAATTGTTCCCAAAGATAGTTAGTTGTATATTCTGAAGA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCAGAGAATTGTTCCCAAAGATAGTTAGTTGTATATTCTGAAGA  698

seq1  TTTTACAGGACAACTAATATCTCATTTGGTATAACAGCATTCTGAAAGGT  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGGACAACTAATATCTCATTTGGTATAACAGCATTCTGAAAGGT  748

seq1  ATTTTCTTTTTATTTATTATTATTTTAATATATTTACCAAATGTTCTTTT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTTTATTTATTATTATTTTAATATATTTACCAAATGTTCTTTT  798

seq1  TTCCCCAATGTGCTCTTCCTTGTTGCTATCTCCACCCCTGTATTTTCTAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAATGTGCTCTTCCTTGTTGCTATCTCCACCCCTGTATTTTCTAT  848

seq1  TGGGTCCTCTTTAAGAAATATAGGGGATTGGGAAAATGCAATGTGAAATT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCTCTTTAAGAAATATAGGGGATTGGGAAAATGCAATGTGAAATT  898

seq1  TACCAGCAAGTCAACTTTAGAACAGAAACAGTAAGGCTTATATAATCCTG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCAAGTCAACTTTAGAACAGAAACAGTAAGGCTTATATAATCCTG  948

seq1  CCACACAACAGATCTTGGTTTTAAATTCACCTGTGTTTTTTTTTTTCCCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAACAGATCTTGGTTTTAAATTCACCTGTGTTTTTTTTTTTCCCT  998

seq1  TCTTCTTGGCTATATCTCATCTTCACTAAGTACCTGGAAAAGGAAATACT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGGCTATATCTCATCTTCACTAAGTACCTGGAAAAGGAAATACT  1048

seq1  TCAATTTTGGTAATGACCACCTAAGAGGAGATGAGATTGTATTTACAGCC  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTGGTAATGACCACCTAAGAGGAGATGAGATTGTATTTACAGCC  1098

seq1  TTTTCTTTATGAGAGAGTCAGAGAATGAGAATTC  1119
      ||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTATGAGAGAGTCAGAGAATGAGAATTC  1132