BAC Information

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BAC

Clone NameB6Ng01-286E06
Chromosome18 (Build37)
Map Location 49,687,335 - 49,688,121
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545470
Downstream geneDtwd2, Dmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286E06.bB6Ng01-286E06.g
ACCGA084508GA084509
length787318
definitionB6Ng01-286E06.b B6Ng01-286E06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcccaggtagttcctgttagaccttctgtgtttacattcctc
tgttttatgtaagaatccagtaacctctttgtaccttgctggtgtgtcac
ccaacttccttattgtcttctgcataaaaactctgatgctcaatttaaaa
aatacattcagattccacacaaactctcctgtgtgtgtctgtttgtcact
catctggcgctttgcccacccgagacgagagacccgttccatgcagacaa
atgggcccagagggacaaaggggcccagagggtctgcaacacagcacaag
ccattgctgttccattcaggaacttttcccctatacccatatcttcgagg
ctttgaggtaacacaatcacaaaggaaataacacaatatgtactcattga
tcagtggatattagcccagaaagttaggatagccaagatataagatacaa
tttgctaaacacatgaaacttaagaagaacgaagaccaaagtgtggacac
tttgccccttcttagaattgggaacaaaacacccatggaaggagttacag
agacaaaatttggagctgtgacgaaaggatggaccatcttgagactgcca
tatcctgggatccatcccataatcagcatccaaatgctgacaccattgca
cacactagcaagattttgctgaaaggacccagatataactctctcttgtg
aggctatgccggggcctagcaaacacagaagtggatgctcacagtcagct
attggatggatcacagggcccccaatggaggagctag

gaattctttgttcagttctgagccccattttttaatggggttatttgatt
tcatggaatctaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgactgtgtcttttgccttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatctttgaggcttttccctac
tttctcctctataagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49687335_49688121
seq2: B6Ng01-286E06.b_45_831

seq1  GAATTCTATCCCAGGTAGTTCCTGTTAGACCTTCTGTGTTTACATTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCCAGGTAGTTCCTGTTAGACCTTCTGTGTTTACATTCCTC  50

seq1  TGTTTTATGTAAGAATCCAGTAACCTCTTTGTACCTTGCTGGTGTGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGTAAGAATCCAGTAACCTCTTTGTACCTTGCTGGTGTGTCAC  100

seq1  CCAACTTCCTTATTGTCTTCTGCATAAAAACTCTGATGCTCAATTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTCCTTATTGTCTTCTGCATAAAAACTCTGATGCTCAATTTAAAA  150

seq1  AATACATTCAGATTCCACACAAACTCTCCTGTGTGTGTCTGTTTGTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTCAGATTCCACACAAACTCTCCTGTGTGTGTCTGTTTGTCACT  200

seq1  CATCTGGCGCTTTGCCCACCCGAGACGAGAGACCCGTTCCATGCAGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGCGCTTTGCCCACCCGAGACGAGAGACCCGTTCCATGCAGACAA  250

seq1  ATGGGCCCAGAGGGACAAAGGGGCCCAGAGGGTCTGCAACACAGCACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCCAGAGGGACAAAGGGGCCCAGAGGGTCTGCAACACAGCACAAG  300

seq1  CCATTGCTGTTCCATTCAGGAACTTTTCCCCTATACCCATATCTTCGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTGTTCCATTCAGGAACTTTTCCCCTATACCCATATCTTCGAGG  350

seq1  CTTTGAGGTAACACAATCACAAAGGAAATAACACAATATGTACTCATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGTAACACAATCACAAAGGAAATAACACAATATGTACTCATTGA  400

seq1  TCAGTGGATATTAGCCCAGAAAGTTAGGATAGCCAAGATATAAGATACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGATATTAGCCCAGAAAGTTAGGATAGCCAAGATATAAGATACAA  450

seq1  TTTGCTAAACACATGAAACTTAAGAAGAACGAAGACCAAAGTGTGGACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAAACACATGAAACTTAAGAAGAACGAAGACCAAAGTGTGGACAC  500

seq1  TTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAG  550

seq1  AGACAAAATTTGGAGCTGTGACGAAAGGATGGACCATCTTGAGACTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATTTGGAGCTGTGACGAAAGGATGGACCATCTTGAGACTGCCA  600

seq1  TATCCTGGGATCCATCCCATAATCAGCATCCAAATGCTGACACCATTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGGGATCCATCCCATAATCAGCATCCAAATGCTGACACCATTGCA  650

seq1  CACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAACTCTCTCTTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAACTCTCTCTTGTG  700

seq1  AGGCTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCT  750

seq1  ATTGGATGGATCACAGGGCCCCCAATGGAGGAGCTAG  787
      |||||||||||||||||||||||||||||||||||||
seq2  ATTGGATGGATCACAGGGCCCCCAATGGAGGAGCTAG  787


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