BAC Information

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BAC

Clone NameB6Ng01-289P12
Chromosome13 (Build37)18 (Build37)
Map Location 67,957,074 - 67,957,32054,051,267 - 54,052,357
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273
Downstream geneBC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289P12.bB6Ng01-289P12.g
ACCGA087227GA087228
length8661,089
definitionB6Ng01-289P12.b B6Ng01-289P12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(67,957,074 - 67,957,320)(54,051,267 - 54,052,357)
sequence
gaattcctgtagtcactgctagtggggacaaaaactagtgcggtcactgt
ggaaatcagtgtcggggttcctcagaaaactaataacagaacttccatat
actatagcaataccattgttgaacacccagggaattctaagttaatatac
cacaaagatatttggatatctgagcatatagctgctctattcacaataac
caggaaatagaaccagccatggttccatttcagtcatgtcaaccaacaaa
tgaatagaaagaatggtacaagtacgtggtgaggccttgtgctggtttga
ataggaatgcccttgccccaggctcatgtatctgaatgcttggtcaaata
catggaaaaaaaatgctaacacaatcacaaaggaactcacacaatatgta
ctcactgataagtggatattagcccaaaacttaggatacccaagatataa
gatacaatttgctaaacgcatgaaactcaagaagaatgaagaccaaagta
tgaacactgtgccccttcttagaattgggaacaaaacacccatggaagga
gttacagagacaaagtttggagctgtgacaaaaggatggaccatctagag
actgccatatccagggatccaccccataatcagcttccaaatgctgacac
cattggatacactagcaagattttgctgaaaggacccagatatagctgtc
tcttgtgaaactatgccgaggcctagcaaacacagaagtggatactcaca
gtcagctattggatggatcacagggctcccaatggaggagctagagaaag
tacccaaggagctaaagggatctgcaaccctataggtggaacaacattat
gaactaaccagtaccc
gaattctatattacaagtttatgaatagtttcttgaatgttctgaactga
atgaggtaaaataggacgtgccttagtttcttagtgatcgttgttgtcat
atgcacttgacttgtctcccttgcctgccatgaatgatctgctagtcagt
ttccattgcttcctttttatctatcacaaagtccagtgttaagaatggac
tcattttcagctgttaaaaaagcctgctcattttctaggctctattttca
gctaagtcactgcttcctacttgactactgattcccagtttcaggcatgg
gccttgttctgggtcctccatcctgctccatcttcattctaggcttcttc
tgggatggaaggcagggagaccctcttaaactgaccgatacactttgact
ttctgtttctgatgtggaaatgtgtgctcttggaagacttcctatgtacc
tgttacacagacagaccagtctccaggtatttctgtacacaaatatgcat
ccacaggctttaccaaaaagaagcacactcaggaaccagagtggttgtcg
cctctgggaagggcagatgctgaggagtgagaagtgtatgaacagctgtg
gaacattcttacctcatttgtggatccttacatttagaatatggttttgg
ttagtccacaaatttcaagtaagtgaaaagctacatattgaaaatacaaa
aatttaccaaaagaaaatagaaaaaagcagaggaggaagtttttaaatgt
ttaaaaatattgctatgttcattaattatttaaaacagctgcactttaaa
gtaagctttttgcaaaaatatggaggatatgtaatactttgagatatact
aaattattacgagggtgatcattgtttttaatgttttttattttaaagat
tttatttatgtatatgagtatactacactgtagctgtacagatgggttgt
gagccaccatattgtttctgagatttgaactcagaacctttgaagaaaca
gtcagtgctctaccactgagccgtctctcagcctaatgtttttttaaaaa
ttaataatatattctatgtacacacatgtgcgtttgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67957074_67957320
seq2: B6Ng01-289P12.b_665_914

seq1  ATCCATCCCATAATTAGCCTCCAAATGATGACACCATTGCATACACTAGC  50
      ||||| |||||||| ||| |||||||| ||||||||||| ||||||||||
seq2  ATCCACCCCATAATCAGCTTCCAAATGCTGACACCATTGGATACACTAGC  50

seq1  AAGCGTTTGTTGCAAGGACCGTGATATAGCTGTCTCTTGTGAGACTATGC  100
      |||  |||| || |||||||  |||||||||||||||||||| |||||||
seq2  AAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGAAACTATGC  100

seq1  CGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGG  150
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CGAGGCCTAGCAAACACAGAAGTGGATACTCACAGTCAGCTATTGGATGG  150

seq1  ATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  200

seq1  GGGATCTGCAACCCTGTAGGTG---CAACATTATGAACTAACCAGTACCC  247
      ||||||||||||||| ||||||   |||||||||||||||||||||||||
seq2  GGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCC  250

seq1: chr18_54051267_54052357
seq2: B6Ng01-289P12.g_68_1156

seq1  GAATTCTATATTACAAGTTTATGAATAGTTTCTTGAATGTTCTGAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATTACAAGTTTATGAATAGTTTCTTGAATGTTCTGAACTGA  50

seq1  ATGAGGTAAAATAGGACGTGCCTTAGTTTCTTAGTGATCGTTGTTGTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTAAAATAGGACGTGCCTTAGTTTCTTAGTGATCGTTGTTGTCAT  100

seq1  ATGCACTTGACTTGTCTCCCTTGCCTGCCATGAATGATCTGCTAGTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTTGACTTGTCTCCCTTGCCTGCCATGAATGATCTGCTAGTCAGT  150

seq1  TTCCATTGCTTCCTTTTTATCTATCACAAAGTCCAGTGTTAAGAATGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGCTTCCTTTTTATCTATCACAAAGTCCAGTGTTAAGAATGGAC  200

seq1  TCATTTTCAGCTGTTAAAAAAGCCTGCTCATTTTCTAGGCTCTATTTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCAGCTGTTAAAAAAGCCTGCTCATTTTCTAGGCTCTATTTTCA  250

seq1  GCTAAGTCACTGCTTCCTACTTGACTACTGATTCCCAGTTTCAGGCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTCACTGCTTCCTACTTGACTACTGATTCCCAGTTTCAGGCATGG  300

seq1  GCCTTGTTCTGGGTCCTCCATCCTGCTCCATCTTCATTCTAGGCTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTTCTGGGTCCTCCATCCTGCTCCATCTTCATTCTAGGCTTCTTC  350

seq1  TGGGATGGAAGGCAGGGAGACCCTCTTAAACTGACCGATACACTTTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGGAAGGCAGGGAGACCCTCTTAAACTGACCGATACACTTTGACT  400

seq1  TTCTGTTTCTGATGTGGAAATGTGTGCTCTTGGAAGACTTCCTATGTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTCTGATGTGGAAATGTGTGCTCTTGGAAGACTTCCTATGTACC  450

seq1  TGTTACACAGACAGACCAGTCTCCAGGTATTTCTGTACACAAATATGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACACAGACAGACCAGTCTCCAGGTATTTCTGTACACAAATATGCAT  500

seq1  CCACAGGCTTTACCAAAAAGAAGCACACTCAGGAACCAGAGTGGTTGTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGCTTTACCAAAAAGAAGCACACTCAGGAACCAGAGTGGTTGTCG  550

seq1  CCTCTGGGAAGGGCAGATGCTGAGGAGTGAGAAGTGTATGAACAGCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGAAGGGCAGATGCTGAGGAGTGAGAAGTGTATGAACAGCTGTG  600

seq1  GAACATTCTTACCTCATTTGTGGATCCTTACATTTAGAATATGGTTTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTCTTACCTCATTTGTGGATCCTTACATTTAGAATATGGTTTTGG  650

seq1  TTAGTCCACAAATTTCAAGTAAGTGAAAAGCTACATATTGAAAATACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCACAAATTTCAAGTAAGTGAAAAGCTACATATTGAAAATACAAA  700

seq1  AATTTACCAAAAGAAAATAGAAAAAAGCAGAGGAGGAAGTTTTTAAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACCAAAAGAAAATAGAAAAAAGCAGAGGAGGAAGTTTTTAAATGT  750

seq1  TTAAAAATATTGCTATGTTCATTAATTATTTAAAACAGCTGCACTTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATATTGCTATGTTCATTAATTATTTAAAACAGCTGCACTTTAAA  800

seq1  GTAAGCTTTTTGCAAAAATATGGAGGATATGTAATACTTTGAGATATACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTTTTTGCAAAAATATGGAGGATATGTAATACTTTGAGATATACT  850

seq1  AAATTATTACGAGGGTGATCATTGTTTTTAATGTTTTTTATTTTAAAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTACGAGGGTGATCATTGTTTTTAATGTTTTTTATTTTAAAGAT  900

seq1  TTTATTTATGTATATGAGTATACTACACTGTAGCTGTACAGAT-GGTTGT  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTATTTATGTATATGAGTATACTACACTGTAGCTGTACAGATGGGTTGT  950

seq1  GAGCCACCATATTGTTTCTGAGATTTGAACTCAGGACCTTTGAAG-AACA  998
      |||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  GAGCCACCATATTGTTTCTGAGATTTGAACTCAGAACCTTTGAAGAAACA  1000

seq1  GTCAGTGCTCTTAACCACTGAGCCGTCTCTCCAGCCCTTAATGTTTTTTT  1048
      |||||||||||  ||||||||||||||||| |||||  ||||||||||||
seq2  GTCAGTGCTCT--ACCACTGAGCCGTCTCT-CAGCC--TAATGTTTTTTT  1045

seq1  AAAAATTA--TATATATTCTTATGTACACACATGTGCGTTTGTGC  1091
      ||||||||   |||||||| |||||||||||||||||||||||||
seq2  AAAAATTAATAATATATTC-TATGTACACACATGTGCGTTTGTGC  1089