BAC Information

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BAC

Clone NameB6Ng01-290M05
Chromosome18 (Build37)
Map Location 28,598,752 - 28,599,863
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665646, EG271505, EG625997
Downstream geneBC051408, LOC100040930, 4930578E11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290M05.bB6Ng01-290M05.g
ACCGA087824GA087825
length1,1881,097
definitionB6Ng01-290M05.b B6Ng01-290M05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcggcttgctggagctagaacaagctccctaccccacacccta
gttctattacattatcactttctgctttccaacactttttttttcttcca
agacagggcttctctgtatagccctggctgtcctggaactgctttccaac
tctttcacagcctaaacttggctgtcctgaaaattgctctttaaattaac
tttgaactctgcaagcctgtctcattaatgctgggattaaaggtgtggta
gaccacacacctggatttaaactttattgtacttagaccttgctttatac
caggctggttttgaactcagagatttacttgactctcctggaataaaata
tgtgtaccaccctgcctgggcactatgcctcaatattcagatcaaaagcc
tgtttcttccagtctcaagatctggatcataagtgtggcctctatttctg
aatagtagttcatttcagattaaaattccaaactattccttcttcaattg
taaacaaaataagtcagtttagctgagtgggatcttgccctgagatcacc
agtcctttaatctctttatctccttgaacacaggatttggctccatttca
cttcctggtgtccctttaatactcaaatcatacattttatatatcttatt
ttttttcctttctaaacctattacacttgttcaaaacactcttcattaga
cttaaccagttgggtttgagacttcctttttcaatgcaattaatacaatt
ttttttttttttacattagcttcaggtagactcttcagaaatgggcaaaa
agtagccaaattgttcaccaaagagctcaggtccctggcttgggtcctca
ctcacagtctctcaaccatcatgcctatgttcatcatgaacaccaatgtt
ccccacatctccaagccagagggggttttctaggagctcacccagcagct
ggcacaggccaccagcaggacagcacagtatatcacagtgcatgtgatac
cggaccagcttatgactttagcagaatgaccacccctgcacccctctgga
gctgcacagccaacctgccagattggtagcacacgatcacatcctacgga
aaagccttgctgtgcagctggctgtgtatgataccttgagcttcaggctt
gaccagctaatatacaaccttattaatgggacacagtt
gaattcaataagaatttgactggagaactgttcacaatgtgtaaacactc
ttactctggaagtcactgatatatgtccagaaggttcctatttggcaagg
agaaatctaatgtccaacagcctaatcctgatttgactgtcttctggtat
gaaaggcatcatatgtctttcataaagatgattttacatgaagtaaacgc
acttaaattagtttattatttgagagtttcatgtgtgtatataaagtgtt
tggagcaaatctaccaatcctcttttctctcctccaatccctttcctttt
tttttttttaagatagacaacaaagattattgaggcaaattctttggctc
atgtttttcaaaacctgcttgctttagtctcccttctagcccaccaccca
caagatgtagtgaaaaaggataataaggcaaaagaggatgtggacctgct
tagaaatagttgttcagagtgattccattctacttcatcaggttttcagc
agttcagttcacacaaatcagcagcagtagctggatccacttgcaaacac
cattcacaaatcagcaatggcagtttgatctacaagaaaccacaaggctc
ttccaataagcatgagtccacaaaagctgaaaaaagccacaggaacaaga
agttctttggtgatgtttctctgtataaagtcacaacaaatgatgaccag
caaagaatggcaaggtgaaccaatgacacatagattagtccactgtcttt
tgggttatagttataccctttccaaaaaccacatgttctctcaagtgtcc
tctctggcaaaacttcacatgccccttttcaggcagcttccagaaaaaca
ccatgtgtctgttcttagcaaaatatcttccagtgtgtctatttcagcaa
aaacatcctctcataagacagtttccagaaaaatatcacttgacacaact
gagttgccaaagaaaccataattttcacttcatcttcccacatactccac
cctctctctttccaacttgatgtgatctgtttcatttactgactagtccc
ctagatagcatgtagacaccatgcttgtgattgtagcaatcagggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28598752_28599863
seq2: B6Ng01-290M05.g_68_1164

seq1  GAATTCAATAAGAATTTGACTGGAGAACTGTTCACAATGTGTAAACACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAGAATTTGACTGGAGAACTGTTCACAATGTGTAAACACTC  50

seq1  TTACTCTGGAAGTCACTGATATATGTCCAGAAGGTTCCTATTTGGCAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTGGAAGTCACTGATATATGTCCAGAAGGTTCCTATTTGGCAAGG  100

seq1  AGAAATCTAATGTCCAACAGCCTAATCCTGATTTGACTGTCTTCTGGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTAATGTCCAACAGCCTAATCCTGATTTGACTGTCTTCTGGTAT  150

seq1  GAAAGGCATCATATGTCTTTCATAAAGATGATTTTACATGAAGTAAACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCATCATATGTCTTTCATAAAGATGATTTTACATGAAGTAAACGC  200

seq1  ACTTAAATTAGTTTATTATTTGAGAGTTTCATGTGTGTATATAAAGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATTAGTTTATTATTTGAGAGTTTCATGTGTGTATATAAAGTGTT  250

seq1  TGGAGCAAATCTACCAATCCTCTTTTCTCTCCTCCAATCCCTTTCCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAAATCTACCAATCCTCTTTTCTCTCCTCCAATCCCTTTCCTTTT  300

seq1  TTTTTTTTTAAGATAGACAACAAAGATTATTGAGGCAAATTCTTTGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAAGATAGACAACAAAGATTATTGAGGCAAATTCTTTGGCTC  350

seq1  ATGTTTTTCAAAACCTGCTTGCTTTAGTCTCCCTTCTAGCCCACCACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTCAAAACCTGCTTGCTTTAGTCTCCCTTCTAGCCCACCACCCA  400

seq1  CAAGATGTAGTGAAAAAGGATAATAAGGCAAAAGAGGATGTGGACCTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGTAGTGAAAAAGGATAATAAGGCAAAAGAGGATGTGGACCTGCT  450

seq1  TAGAAATAGTTGTTCAGAGTGATTCCATTCTACTTCATCAGGTTTTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAGTTGTTCAGAGTGATTCCATTCTACTTCATCAGGTTTTCAGC  500

seq1  AGTTCAGTTCACACAAATCAGCAGCAGTAGCTGGATCCACTTGCAAACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGTTCACACAAATCAGCAGCAGTAGCTGGATCCACTTGCAAACAC  550

seq1  CATTCACAAATCAGCAATGGCAGTTTGATCTACAAGAAACCACAAGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACAAATCAGCAATGGCAGTTTGATCTACAAGAAACCACAAGGCTC  600

seq1  TTCCAATAAGCATGAGTCCACAAAAGCTGAAAAAAGCCACAGGAACAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATAAGCATGAGTCCACAAAAGCTGAAAAAAGCCACAGGAACAAGA  650

seq1  AGTTCTTTGGTGATGTTTCTCTGTATAAAGTCACAACAAATGATGACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTGGTGATGTTTCTCTGTATAAAGTCACAACAAATGATGACCAG  700

seq1  CAAAGAATGGCAAGGTGAACCAATGACACATAGATTAGTCCACTGTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATGGCAAGGTGAACCAATGACACATAGATTAGTCCACTGTCTTT  750

seq1  TGGGTTATAGTTATACCCTTTCCAAAAACCACATGTTCTCTCAAGTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTATAGTTATACCCTTTCCAAAAACCACATGTTCTCTCAAGTGTCC  800

seq1  TCTCTGGCAAAACTTCACATGCCCCTTTTCAGGCAGCTTCCAGAAAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCAAAACTTCACATGCCCCTTTTCAGGCAGCTTCCAGAAAAACA  850

seq1  CCATGTGTCTGTTCTTAGCAAAATATCTTCCAGTGTGTCTATTTCAGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTCTGTTCTTAGCAAAATATCTTCCAGTGTGTCTATTTCAGCAA  900

seq1  AAACATCCTCTCATAAGACAGTTTCCAGAAAAATATCACTTGACACAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCCTCTCATAAGACAGTTTCCAGAAAAATATCACTTGACACAACT  950

seq1  GAGTTGCCAAAGAAACCATAAATTTCCACTTCATCTTCCCACATACTCCA  1000
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  GAGTTGCCAAAGAAACCAT-AATTTTCACTTCATCTTCCCACATACTCCA  999

seq1  CCCTTCTTCTCTTTCCCAACTTGATGTGATCTTGTTTTCATTTTAACTGA  1050
      ||||   ||||||| |||||||||||||||||   ||||||||  |||||
seq2  CCCT--CTCTCTTT-CCAACTTGATGTGATCT--GTTTCATTT--ACTGA  1042

seq1  CTTAGTCCCCCTAGAATAGCATGTAGACAACCATTGCTTTAGTGTTTGTA  1100
      | |||| ||||||| ||||||||||||| |||| |||||  ||| |||||
seq2  C-TAGT-CCCCTAG-ATAGCATGTAGAC-ACCA-TGCTT--GTGATTGTA  1085

seq1  GCCATCAGGGCC  1112
      || |||||||||
seq2  GCAATCAGGGCC  1097