BAC Information

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BAC

Clone NameB6Ng01-291E13
Chromosome18 (Build37)
Map Location 69,504,726 - 69,505,370
singlet/doubletsinglet
Overlap geneTcf4
Upstream geneMc2r, LOC100043380, EG225681
Downstream geneCcdc68, Rab27b, 2310002L13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291E13.bB6Ng01-291E13.g
ACCGA088211GA088212
length1,092645
definitionB6Ng01-291E13.b B6Ng01-291E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaacacggagacaagattgagcaaaccacttgcgaaccaag
ccaatagatacgagcacactcaagcctccactctggggcctttgctccaa
gtcacaccctttctaaggcctgccacaaaggcaacacattccactggaga
gacaagcacagtcaggtgtgacacagaggaaggccgaggagaactgtcat
aggctggcaaaaataaaagaaatatctaaagttttagtggtggatgggat
aaaatgagacttaaatgaatattttcttatatatttttttatttgtgagc
ctagcctctaatggctgagccaacaaccctttgatctacagcagtgacct
gcctacatgatattctgctgaaacggtggcacaaaagtggtgagagcaag
agatcattatctgattggaacgaaggctcactccatgaaatgaactgata
ctgcttgggtaaccaagaaccggagagtagataggccatggatctggggc
aaaaccaaatactattattctgttaaagcaataagacgacatctatgaac
attctgctagacccataaagtagtggtctgctcagccattatcagagaag
cttcatcctggattacacaggaactaatgcagagacccacagctggacaa
tgtgcagggaagaagagaccagggaccactacaggagatgtctttatcca
attcctcccctagaaaaactctgcagaaggggaggtagaaagaggatagg
agccggtagggggatggaagacaccaaggccttccagacacgcagcactg
atacacatgtgaacctggagattgtgcacggtggcctgcagaggctcaag
ccagatgaggtcccaggactgggagagtagtggacacaactcagaagcta
tctccaactcacaaccactcaccaaagaaaactgaattctaccccatggg
gtctcactggttatacaaacacgattaaaggcagccatgctggagactgt
tttgtttgtctaatatccttattgagcatttgttttaccttactggtctt
tctttaaatatatgtttctgattttgtttttagcctgtgtgt
gaattcttagaatgttgagcccaatgttttattcaaacaaaaggaacaac
ctattaaataattgccagtgggaaaacgtgtgtgcatgcatttccgtacg
tactcgtacatttagcaataccaggtttgggcaaatgtgttcttttaaca
ttaaagtaatgaatgttgcatatactgggtaaagctcgcatgttattacg
taaagataattttaaagttgaatttttatcctaaaaggatgtgggaaaag
tgtgttttaagagcacatagggcctgtagtggtaaatgttgagttgaaaa
cttgaagtgctagccgagcgcggacttggagttacgaactcaagtgtaag
aagcaaaaccatattcgtccctctaaaattacctttttttttttcctttt
aaaacaaagtttgcagctatacgactctgtgagttaaaaaggcgaaaaaa
agaagtctgtgattcagatttcggccccaaacgcaaaactatccaaacaa
aatatccccctagtaaaaatgtggatgggtttctgtatggaaaagaaaaa
tattgttcgtcttggcaaagtctttatgcatcacgtgtatttgcagcaaa
gcaaaacttgctttgcagtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_69504726_69505370
seq2: B6Ng01-291E13.g_70_714

seq1  GAATTCTTAGAATGTTGAGCCCAATGTTTTATTCAAACAAAAGGAACAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAATGTTGAGCCCAATGTTTTATTCAAACAAAAGGAACAAC  50

seq1  CTATTAAATAATTGCCAGTGGGAAAACGTGTGTGCATGCATTTCCGTACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAATAATTGCCAGTGGGAAAACGTGTGTGCATGCATTTCCGTACG  100

seq1  TACTCGTACATTTAGCAATACCAGGTTTGGGCAAATGTGTTCTTTTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCGTACATTTAGCAATACCAGGTTTGGGCAAATGTGTTCTTTTAACA  150

seq1  TTAAAGTAATGAATGTTGCATATACTGGGTAAAGCTCGCATGTTATTACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAATGAATGTTGCATATACTGGGTAAAGCTCGCATGTTATTACG  200

seq1  TAAAGATAATTTTAAAGTTGAATTTTTATCCTAAAAGGATGTGGGAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATAATTTTAAAGTTGAATTTTTATCCTAAAAGGATGTGGGAAAAG  250

seq1  TGTGTTTTAAGAGCACATAGGGCCTGTAGTGGTAAATGTTGAGTTGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTAAGAGCACATAGGGCCTGTAGTGGTAAATGTTGAGTTGAAAA  300

seq1  CTTGAAGTGCTAGCCGAGCGCGGACTTGGAGTTACGAACTCAAGTGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGTGCTAGCCGAGCGCGGACTTGGAGTTACGAACTCAAGTGTAAG  350

seq1  AAGCAAAACCATATTCGTCCCTCTAAAATTACCTTTTTTTTTTTCCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAACCATATTCGTCCCTCTAAAATTACCTTTTTTTTTTTCCTTTT  400

seq1  AAAACAAAGTTTGCAGCTATACGACTCTGTGAGTTAAAAAGGCGAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGTTTGCAGCTATACGACTCTGTGAGTTAAAAAGGCGAAAAAA  450

seq1  AGAAGTCTGTGATTCAGATTTCGGCCCCAAACGCAAAACTATCCAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCTGTGATTCAGATTTCGGCCCCAAACGCAAAACTATCCAAACAA  500

seq1  AATATCCCCCTAGTAAAAATGTGGATGGGTTTCTGTATGGAAAAGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCCCCTAGTAAAAATGTGGATGGGTTTCTGTATGGAAAAGAAAAA  550

seq1  TATTGTTCGTCTTGGCAAAGTCTTTATGCATCACGTGTATTTGCAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTCGTCTTGGCAAAGTCTTTATGCATCACGTGTATTTGCAGCAAA  600

seq1  GCAAAACTTGCTTTGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT  645
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACTTGCTTTGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT  645