BAC Information

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BAC

Clone NameB6Ng01-291M04
Chromosome18 (Build37)
Map Location 29,208,704 - 29,209,766
singlet/doubletsinglet
Overlap genenone
Upstream geneEG271505, EG625997, BC051408
Downstream geneLOC100040930, 4930578E11Rik, LOC666073
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291M04.bB6Ng01-291M04.g
ACCGA088567GA088568
length1,1091,066
definitionB6Ng01-291M04.b B6Ng01-291M04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgatctttccaagacttttcccaagaacaggtgttggatatta
tcaaatgctttctcagcatctaatgagatgaacttgtggtgtttgtcttt
gagtttgtttatatagtagattacactgatggatttccatatattgaacc
attctgtaacccaggaatgaagcctacttgatcatgatggatggtcgttt
ttgatgtgttcttggatttggtttgtgataattttattgagtatttttgc
atcgatatttttaagggaaattagtcggatgttttcttactttatttggg
tctctgtgtggtttaagtatcagaataattgtggcttcatagaacaaatt
gtgtagagtaactgctgtttctattttgtggaatagtttggggagtattg
aaattaggtattctttgaagttctgagataactctgcatgaaacccatct
ggtcctggcctttttttggttgggagactattaatgaatgtttctatttc
tttaggggatatgggacagtttagatcattaatctgatcctgatttaact
ttggtaccttgtatctgtctagaaaattttccattttatccaggttttcc
agttttgttgagtatagccttttatagtaggatctgatgatgttttggat
ttgctcacattctgttgttaagtctcccttttcatttctgattttgttaa
ttaggatactgtccctgtgccctttagttagtctagctaagggtttattt
attttgttgatttttctcaaagaaccagctcctgtgagtctataagcctg
tgttaggagtgtgttagcactcctgggagaccatctctctgctggcagaa
tcagtgcacagagggctgcagaacagccccacctcctggttgcagatgta
ggtacctgtcccagcttctctgctgcttctgcagcctgttcactccttga
gtgaactgccttagagagacacagagagaaaattggagatctcacccgag
tcccttgtgtcacgtgcattccttggaggaaagctctctctgggcaagga
aggtgtacatgataaaactgatccgtataataattctccttgaactcatg
gaagttttg

gaattctggactaaaaccatctgtccctgggctctttttggttgggagac
ttttaatcactgagtcctttggggttgtggagttgtttagatgggttatc
tgaacatggtttaattttggtacctggtatctgtctataaattcatccat
tccattcatgtttttctgaaggcacaacatacccaaacttatgggacaca
gtgacagcagcagtgctaagagaaaaactcatagttctgagcgcctccaa
aaataaattggagtgagcatacactagcaactcatctgaaagttcttagt
tacttttattttttatttctgtaacaaaacaccaaaatgtgggtgctggg
aattaaacttggacagtctggaagaccaacatatggtcataatctctcat
ccatctcagtagtctccagtaaggagttgtgttatgatttttcttcttag
ctgttacatgttatactacattctttagtcttaatgtgtttctgagaaga
agcatatagttgtttgaattatggttcactgagtcagagattatgtttac
taatattcatagcctttttgttttaactcactgggaaggatgggctagta
gcatgtgatccaggataaagaccatgcatgttgataaacatcccaaagtg
cataccaggtgtgacagaaagccttgtctgtctaacccagtctgtctgtc
aatagtgtagagtttatgaagacttcccagtaggtcatactttaagtttt
tggtggttgccttttatttttatttttgttactgttcatgtttgccttta
gtttcagagattagagtataattccttaaaatacatttttcctgcttgta
ccagtagtggtatcatcccaaacacatacaacacgttacaaaggtagaat
tatccattactaaagttaagacagaattgcttctagaaaaaaatgtaatt
ctatacccttcatctcttctggctaatattcatgtacatattatgggata
ttaacttttattaaatgaaatttcagtaagtagcataagcatggacatat
tgtgaatattccactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_29208704_29209766
seq2: B6Ng01-291M04.g_67_1132 (reverse)

seq1  GAGT-GAATA-TCACAATATGCCCATGCTTATTGCTACTTACTTGAAAAT  48
      |||| ||||| |||||||||| ||||||||| |||||||||||   ||||
seq2  GAGTGGAATATTCACAATATGTCCATGCTTA-TGCTACTTACT--GAAAT  47

seq1  TTCATTTA--TAAAGTTAATATCCCATAATATGTACATTGAATATTAGCC  96
      ||||||||   |||||||||||||||||||||||||| ||||||||||||
seq2  TTCATTTAATAAAAGTTAATATCCCATAATATGTACA-TGAATATTAGCC  96

seq1  AGAAGAGATGAA-GGTATAGAATTACATTTTTTTCTAGAAGCAATTCTGT  145
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGATGAAGGGTATAGAATTACATTTTTTTCTAGAAGCAATTCTGT  146

seq1  CTT-ACTTTAGTAATGGATAATTCTACCTTTGTAACGTGTTGTATGTGTT  194
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTTTAGTAATGGATAATTCTACCTTTGTAACGTGTTGTATGTGTT  196

seq1  TGGGATGATACCACTACTGGTACAAGCAGG-AAAATGTATTTTAAGGAAT  243
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGGGATGATACCACTACTGGTACAAGCAGGAAAAATGTATTTTAAGGAAT  246

seq1  TATACTCTAATCTCTGAAACTAAAGGCAAACATGAACAGTAACAAAAATA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTCTAATCTCTGAAACTAAAGGCAAACATGAACAGTAACAAAAATA  296

seq1  AAAATAAAAGGCAACCACCAAAAACTTAAAGTATGACCTACTGGGAAGTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAGGCAACCACCAAAAACTTAAAGTATGACCTACTGGGAAGTC  346

seq1  TTCATAAACTCTACACTATTGACAGACAGACTGGGTTAGACAGACAAGGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAACTCTACACTATTGACAGACAGACTGGGTTAGACAGACAAGGC  396

seq1  TTTCTGTCACACCTGGTATGCACTTTGGGATGTTTATCAACATGCATGGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCACACCTGGTATGCACTTTGGGATGTTTATCAACATGCATGGT  446

seq1  CTTTATCCTGGATCACATGCTACTAGCCCATCCTTCCCAGTGAGTTAAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCCTGGATCACATGCTACTAGCCCATCCTTCCCAGTGAGTTAAAA  496

seq1  CAAAAAGGCTATGAATATTAGTAAACATAATCTCTGACTCAGTGAACCAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGGCTATGAATATTAGTAAACATAATCTCTGACTCAGTGAACCAT  546

seq1  AATTCAAACAACTATATGCTTCTTCTCAGAAACACATTAAGACTAAAGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAACAACTATATGCTTCTTCTCAGAAACACATTAAGACTAAAGAA  596

seq1  TGTAGTATAACATGTAACAGCTAAGAAGAAAAATCATAACACAACTCCTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTATAACATGTAACAGCTAAGAAGAAAAATCATAACACAACTCCTT  646

seq1  ACTGGAGACTACTGAGATGGATGAGAGATTATGACCATATGTTGGTCTTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGACTACTGAGATGGATGAGAGATTATGACCATATGTTGGTCTTC  696

seq1  CAGACTGTCCAAGTTTAATTCCCAGCACCCACATTTTGGTGTTTTGTTAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTCCAAGTTTAATTCCCAGCACCCACATTTTGGTGTTTTGTTAC  746

seq1  AGAAATAAAAAATAAAAGTAACTAAGAACTTTCAGATGAGTTGCTAGTGT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAAAATAAAAGTAACTAAGAACTTTCAGATGAGTTGCTAGTGT  796

seq1  ATGCTCACTCCAATTTATTTTTGGAGGCGCTCAGAACTATGAGTTTTTCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCACTCCAATTTATTTTTGGAGGCGCTCAGAACTATGAGTTTTTCT  846

seq1  CTTAGCACTGCTGCTGTCACTGTGTCCCATAAGTTTGGGTATGTTGTGCC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCACTGCTGCTGTCACTGTGTCCCATAAGTTTGGGTATGTTGTGCC  896

seq1  TTCAGAAAAACATGAATGGAATGGATGAATTTATAGACAGATACCAGGTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAAACATGAATGGAATGGATGAATTTATAGACAGATACCAGGTA  946

seq1  CCAAAATTAAACCATGTTCAGATAACCCATCTAAACAACTCCACAACCCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATTAAACCATGTTCAGATAACCCATCTAAACAACTCCACAACCCC  996

seq1  AAAGGACTCAGTGATTAAAAGTCTCCCAACCAAAAAGAGCCCAGGGACAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTCAGTGATTAAAAGTCTCCCAACCAAAAAGAGCCCAGGGACAG  1046

seq1  ATGGTTTTAGTCCAGAATTC  1063
      ||||||||||||||||||||
seq2  ATGGTTTTAGTCCAGAATTC  1066


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