BAC Information

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BAC

Clone NameB6Ng01-292D04
Chromosome18 (Build37)
Map Location 24,123,834 - 24,124,953
singlet/doubletsinglet
Overlap genenone
Upstream geneNol4, LOC100040579, LOC665797, Dtna, Mapre2, EG665813, LOC100040623, Zfp397
Downstream geneC230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586, 2700062C07Rik, BC021395, Slc39a6, Epl2, Mocos, Fhod3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292D04.bB6Ng01-292D04.g
ACCGA088897GA088898
length1,1961,115
definitionB6Ng01-292D04.b B6Ng01-292D04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcatagcgacacactattggcctattcaaacattaacagaaag
aacacagggcatcaggactttcctgtgggctgggggcttatctttgttca
catagcaaccagttgatgtatgacttttacccagcgccaaggggtaacag
aaaggaggttccgaccagatggtgtgaacttagataatgtagccccattt
gtccttgaataccttttcatcttacggccaagatgttcttaggaatgcct
tatcaacagccctgccttggcctgcctgggggctgttctgctttgttctc
agtcccagatcggggcagtgggctcttaaacaactcacaagttacaatat
tttatcttccttcacaaccatgcctggcttccatgtgagtttcaaacggc
cttttgctacgcacactccagtgaagtttgcttggcaggccaagaggcct
gggagcactcacgaggcaaagagtttcagggaaactcaccttctggaact
ttggcatcctcacaacccgtatactcataccctatccccgcgttagtctg
gtgtatggatccacgtgctctcttttagtattattttattataagtgcct
tttaagattgaattctgacatagctaagcctttgccagtgttccaacatc
ccagaaagaccttgaagctgacaaacttggaattcagtaggaattcagta
agaaagttgcctattcagtaactaattaagcattacaaaggacggagcca
gagcagctcagggctggtctgcagagtgtttacttgggacagtagccagt
cttacccaaacacaatggcctagcgaataggtggatttaccatgaaagag
ctatagagtcccactgagatagaaatcttcagtacaggctacattgcata
ttagaagcaagttggtgaattcttctgacaaatggagattctccacagat
acttaaaagttacaatcatacagaatttatcaggcccaggaaataggggg
gttgtggtattgcattattcatgagagtctgctagagcagatccccctgt
gctagcttcacagctcaaagagtagcactatgtgactaggtgtgaattcc
ttactgtcataagcctgacctaggcaagactgcctttatcttacgtaaac
taactgattcgtaagtcatttgaagatcaattccctttggatactc
gaattctctgatgtcttacaaggtctgctctgaaaccaaaggcctttcca
cattctttacatgcataaggtctctctccagtgtgacttctctggtgtct
aataagttttgatctattgcaaaaagttttcccacaatctacacacgcat
agagcagtttccctgtgtgagttgtgggccgtgtagtaccatgtaagttt
tgactagggatcctatcaccttcattacactcaaagatgttctgttctat
agggggtttcttgttaaaggttgccaaactgaaatagtcttcctgagaag
aaagctgacttgttttgttgcttgtatcatcacttcctctttgcttctca
ttgttgtccagacattccatagtttcttcaactatctgtactggagaagt
ttccctaggaagtcttcctggagatgccatggccactgatgcaacacatt
caataatttcttgctttgctgtcaatattttcccagtcaccatcttgcta
tctaaaaatatgaataggatttatctttttttttttttcatgttaaaaaa
agtgttagagaagaaacaacaagtaaaccaaaggaaaagataagtgctgg
gtctggagaggtagcttagtgatttaagagtgcatattcgtcttgcagaa
gacccacttcagtttctagaacccacatggtggctcacaaccatacctaa
cttcagttccaggagctccaacatcgttttcttgcctctatgggacaagt
catgcaggtggtgcatgtatagacatacagacaaacatgcaaactttttt
caaaacaaaacagggatggacatacagacaaatgacagagtatttgcaaa
cacaaggccctgggtttgatcttcaggattagggaagggatatggctggg
gaaatgacaattagcttcccaatatagaatatagcacccacgagagtaaa
atggacaagaacgtaagtcagtattgaagatactgagtagtgacaggaaa
aaaaaatactagagggtgacaaatagtcatacagccataagccagaaagg
gaagagactctagaataagctattgtgagaggaaggtgaatcttaaaatg
tcttagagtgtacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_24123834_24124953
seq2: B6Ng01-292D04.g_63_1177

seq1  GAATTCTCTGATGTCTTACAAGGTCTGCTCTGAAACCAAAGGCCTTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATGTCTTACAAGGTCTGCTCTGAAACCAAAGGCCTTTCCA  50

seq1  CATTCTTTACATGCATAAGGTCTCTCTCCAGTGTGACTTCTCTGGTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTACATGCATAAGGTCTCTCTCCAGTGTGACTTCTCTGGTGTCT  100

seq1  AATAAGTTTTGATCTATTGCAAAAAGTTTTCCCACAATCTACACACGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTTTGATCTATTGCAAAAAGTTTTCCCACAATCTACACACGCAT  150

seq1  AGAGCAGTTTCCCTGTGTGAGTTGTGGGCCGTGTAGTACCATGTAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGTTTCCCTGTGTGAGTTGTGGGCCGTGTAGTACCATGTAAGTTT  200

seq1  TGACTAGGGATCCTATCACCTTCATTACACTCAAAGATGTTCTGTTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGGGATCCTATCACCTTCATTACACTCAAAGATGTTCTGTTCTAT  250

seq1  AGGGGGTTTCTTGTTAAAGGTTGCCAAACTGAAATAGTCTTCCTGAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGTTTCTTGTTAAAGGTTGCCAAACTGAAATAGTCTTCCTGAGAAG  300

seq1  AAAGCTGACTTGTTTTGTTGCTTGTATCATCACTTCCTCTTTGCTTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGACTTGTTTTGTTGCTTGTATCATCACTTCCTCTTTGCTTCTCA  350

seq1  TTGTTGTCCAGACATTCCATAGTTTCTTCAACTATCTGTACTGGAGAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTCCAGACATTCCATAGTTTCTTCAACTATCTGTACTGGAGAAGT  400

seq1  TTCCCTAGGAAGTCTTCCTGGAGATGCCATGGCCACTGATGCAACACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAGGAAGTCTTCCTGGAGATGCCATGGCCACTGATGCAACACATT  450

seq1  CAATAATTTCTTGCTTTGCTGTCAATATTTTCCCAGTCACCATCTTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTTCTTGCTTTGCTGTCAATATTTTCCCAGTCACCATCTTGCTA  500

seq1  TCTAAAAATATGAATAGGATTTATCTTTTTTTTTTTTTCATGTTAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAATATGAATAGGATTTATCTTTTTTTTTTTTTCATGTTAAAAAA  550

seq1  AGTGTTAGAGAAGAAACAACAAGTAAACCAAAGGAAAAGATAAGTGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTAGAGAAGAAACAACAAGTAAACCAAAGGAAAAGATAAGTGCTGG  600

seq1  GTCTGGAGAGGTAGCTTAGTGATTTAAGAGTGCATATTCGTCTTGCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAGAGGTAGCTTAGTGATTTAAGAGTGCATATTCGTCTTGCAGAA  650

seq1  GACCCACTTCAGTTTCTAGAACCCACATGGTGGCTCACAACCATACCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACTTCAGTTTCTAGAACCCACATGGTGGCTCACAACCATACCTAA  700

seq1  CTTCAGTTCCAGGAGCTCCAACATCGTTTTCTTGCCTCTATGGGACAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTCCAGGAGCTCCAACATCGTTTTCTTGCCTCTATGGGACAAGT  750

seq1  CATGCAGGTGGTGCATGTATAGACATACAGACAAACATGCAAACTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGTGGTGCATGTATAGACATACAGACAAACATGCAAACTTTTTT  800

seq1  CAAAACAAAACAGGGATGGACATACAGACAAATGACAGAGTATTTGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAGGGATGGACATACAGACAAATGACAGAGTATTTGCAAA  850

seq1  CACAAGGCCCTGGGTTTGATCTTCAGGATTAGGGAAGGGATATGGCTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGCCCTGGGTTTGATCTTCAGGATTAGGGAAGGGATATGGCTGGG  900

seq1  GAAATGACAATTAGCTTCCCAATATAGAATATAGCACCCACGAGAGTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGACAATTAGCTTCCCAATATAGAATATAGCACCCACGAGAGTAAA  950

seq1  ATGGACAAGGAACGTAAGTCAGTATTGAAGATACTGAGTAGTGAACAAG-  999
      |||||||| |||||||||||||||||||||||||||||||||| ||| | 
seq2  ATGGACAA-GAACGTAAGTCAGTATTGAAGATACTGAGTAGTG-ACAGGA  998

seq1  AAAAAAAATACTTAGA-GGTGACAAATAGTTCATACCAGCCATAAGCCAG  1048
      ||||||||||| |||| |||||||||||| ||||| ||||||||||||||
seq2  AAAAAAAATAC-TAGAGGGTGACAAATAG-TCATA-CAGCCATAAGCCAG  1045

seq1  AAAGGGAAGAGACTTCTAG-ATAAGCTAATGTGAGAGGAGAGGTG-ATAC  1096
      ||||||||||||| ||||| |||||||| |||||||||| ||||| ||  
seq2  AAAGGGAAGAGAC-TCTAGAATAAGCTATTGTGAGAGGA-AGGTGAATCT  1093

seq1  TAAAATGTCTTAAGAGTTGTACAT  1120
      ||||||||||| |||| |||||||
seq2  TAAAATGTCTT-AGAG-TGTACAT  1115