BAC Information

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BAC

Clone NameB6Ng01-292H04
Chromosome18 (Build37)
Map Location 64,055,842 - 64,233,787
singlet/doubletdoublet
Overlap geneWdr7
Upstream geneApcdd1, Napg, 9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1
Downstream geneLOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480, Nedd4l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292H04.bB6Ng01-292H04.g
ACCGA089085GA089086
length1,1301,167
definitionB6Ng01-292H04.b B6Ng01-292H04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,232,652 - 64,233,787)(64,055,842 - 64,056,986)
sequence
gaattccaagagctttataacaccaagtgaagtatagttgttgttttata
gtgaagtataattgttttcaagcttggaaggtttcgctgctgatctatat
actacattgtaaaggctgaggtcagtcgagggcagagggtggcctttgcc
aaacacctactaacattttgagggaagaccatgaataacacttgaaaatt
tcagtgggtagaagacaaaaggaagactcttaacaagtgaatgtggttgc
cagtctcccatgtggtctcctgattttagttcttagtatcctcacctctg
tatagcctttcctacataaggctggtctatggagccaaaaaaaaatgatg
gagtatgacttcccaggtaaggccataaaaaacattttggcttcttcctt
gctttctcttggattaactgtcagggaatctagaggacacggggaaatcc
tagttgtggagagttagaaagttgacctggtgtatttcctcatccagttg
ttagggcagaaatctagaagacctagaaccaacctctgtccaaccttggg
aacttgacactgtcaatcaaaaaaataaaacaaatgacagaaacatttca
tctggggcaattttcctaactgataggaagaccaaaagtgattaggtcac
acaatagcatggagttcaaagtttcgtccttatcatctggatgttgaagg
tttatttttatctaatataaaaatatcatattatgttgcattaattaagc
tatgtagcaagagcaataggatttcatctaaaagaactttttgcttgctt
tagcctgtgagtccttactcataagaacaagtctaaatgacacctagaac
ggaaactctctttttatttaagaattgtgcatatgggaaaagctaagtgt
ggtacccagagaactactgagcccacctattatctttgaccctattccct
aaaagctagagaaccaaaatcctataaccaagaaaatcacaaaagctcaa
caagaggtccacgtgctatcgttattactattttgacactttgttaataa
cagtttagtattttttaaaattcagttaaaatacagtatttgcctagtat
tgaatcttcttgcagtacaattaagaaaga
gaattctctctaacgagggtactttgggaggtttttcagctgcggcgggc
ttggaggatggcactattgggagttccagaaggtccttgaacccattggt
gcagttggtgctgacaagcaggcatgtgagaactcagcagtggggccaga
aacttgatggttgaacacctattgccaatgaagatcagtgacttgagatg
ccatgtcttaggaacagggcagtgctatctatcccagggctgcctctgaa
gttttagttttagttttagttttagttttagttttcgttttcgttttcgt
tttcgttttagttcaattggcattagttttgccttccaggactcaaaact
tagggctgattcattaacataatctcagcactggtatactgagatggaag
gcagaggcaggtatattccttggaaccttgcaccctgtgacaagctgccc
tgctatatgcagccgcaaacaacaagaggccctgtttcagacaagggtga
ccttccgcctccatataaatgccatggcacatatataaacactgcataca
tatagagtgggtgaggggaaaagaaacacagaaagagataccccaaacta
aatgggattgctgcaccctatttacagtcagcaggcagatagtgatcttc
tgctcctacttgtttggctaaatgtaactgccattcaaacaagctgtttg
tgccagaatacttagtctctgtctgtctgtctgtctctgtctctgtctct
gtctctgcctctctctctctctctctctcacacacacacacacacacaca
cacacacactcccactcactcactcatatggaaatagcccaatccctaaa
tgaatcttgcttggtctgccattaaaacagtttttaacagaacctgtgca
gttctctctggctggtctgctacctcttgctaccttttggaagcttacct
tggtcttcccgggcccgccctttccccagccctgtatgacgtgcctctgg
tgtgccagccccggctgccttccacctgtgaaatgaggccaaggtcattc
cacgcctccctcgccaagaagccttccacagttccctcatggtcctggca
ccaagcccatgtgtgaaagaacttacctgtgcccatggactgcctgccat
ccctcatgctgtcagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_64232652_64233787
seq2: B6Ng01-292H04.b_46_1175 (reverse)

seq1  TCTTTCTTAATGGTTACCTGCAAGAAGATTC-ATACTAGGCAAATACTGG  49
      ||||||||||| ||   |||||||||||||| |||||||||||||||| |
seq2  TCTTTCTTAATTGT--ACTGCAAGAAGATTCAATACTAGGCAAATACT-G  47

seq1  TATTTTAAACTGAATTTTTAAAAAAATTAACTAAAACTTGTTA-TAACAA  98
      |||||| |||||||||||  |||||||  ||||||   ||||| ||||||
seq2  TATTTT-AACTGAATTTT--AAAAAAT--ACTAAA--CTGTTATTAACAA  90

seq1  AGTGTCAAAATAGTAATAACGATAGCACGT-GACCTCTTGTTGAGCTTTT  147
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGTGTCAAAATAGTAATAACGATAGCACGTGGACCTCTTGTTGAGCTTTT  140

seq1  GTGATTTTCTTGGTTATAGGATTTTGGTTCTCTAGCTTTTAGGGAATAGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTTCTTGGTTATAGGATTTTGGTTCTCTAGCTTTTAGGGAATAGG  190

seq1  GTCAAAGATAATAGGTGGGCTCAGTAGTTCTCTGGGTACCACACTTAGCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGATAATAGGTGGGCTCAGTAGTTCTCTGGGTACCACACTTAGCT  240

seq1  TTT-CCATATGCACAATTCTTAAATAAAAAGAGAGTTTCCGTTCTAGGTG  296
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATATGCACAATTCTTAAATAAAAAGAGAGTTTCCGTTCTAGGTG  290

seq1  TCATTTAGACTTGTTCTTATGAGTAAGGACTCACAGGCTAAAGCAAGCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGACTTGTTCTTATGAGTAAGGACTCACAGGCTAAAGCAAGCAA  340

seq1  AAAGTTCTTTTAGATGAAATCCTATTGCTCTTGCTACATAGCTTAATTAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCTTTTAGATGAAATCCTATTGCTCTTGCTACATAGCTTAATTAA  390

seq1  TGCAACATAATATGATATTTTTATATTAGATAAAAATAAACCTTCAACAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACATAATATGATATTTTTATATTAGATAAAAATAAACCTTCAACAT  440

seq1  CCAGATGATAAGGACGAAACTTTGAACTCCATGCTATTGTGTGACCTAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGATAAGGACGAAACTTTGAACTCCATGCTATTGTGTGACCTAAT  490

seq1  CACTTTTGGTCTTCCTATCAGTTAGGAAAATTGCCCCAGATGAAATGTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTGGTCTTCCTATCAGTTAGGAAAATTGCCCCAGATGAAATGTTT  540

seq1  CTGTCATTTGTTTTATTTTTTTGATTGACAGTGTCAAGTTCCCAAGGTTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATTTGTTTTATTTTTTTGATTGACAGTGTCAAGTTCCCAAGGTTG  590

seq1  GACAGAGGTTGGTTCTAGGTCTTCTAGATTTCTGCCCTAACAACTGGATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGTTGGTTCTAGGTCTTCTAGATTTCTGCCCTAACAACTGGATG  640

seq1  AGGAAATACACCAGGTCAACTTTCTAACTCTCCACAACTAGGATTTCCCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATACACCAGGTCAACTTTCTAACTCTCCACAACTAGGATTTCCCC  690

seq1  GTGTCCTCTAGATTCCCTGACAGTTAATCCAAGAGAAAGCAAGGAAGAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTCTAGATTCCCTGACAGTTAATCCAAGAGAAAGCAAGGAAGAAG  740

seq1  CCAAAATGTTTTTTATGGCCTTACCTGGGAAGTCATACTCCATCATTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGTTTTTTATGGCCTTACCTGGGAAGTCATACTCCATCATTTTT  790

seq1  TTTTGGCTCCATAGACCAGCCTTATGTAGGAAAGGCTATACAGAGGTGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCTCCATAGACCAGCCTTATGTAGGAAAGGCTATACAGAGGTGAG  840

seq1  GATACTAAGAACTAAAATCAGGAGACCACATGGGAGACTGGCAACCACAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTAAGAACTAAAATCAGGAGACCACATGGGAGACTGGCAACCACAT  890

seq1  TCACTTGTTAAGAGTCTTCCTTTTGTCTTCTACCCACTGAAATTTTCAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTTAAGAGTCTTCCTTTTGTCTTCTACCCACTGAAATTTTCAAG  940

seq1  TGTTATTCATGGTCTTCCCTCAAAATGTTAGTAGGTGTTTGGCAAAGGCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTCATGGTCTTCCCTCAAAATGTTAGTAGGTGTTTGGCAAAGGCC  990

seq1  ACCCTCTGCCCTCGACTGACCTCAGCCTTTACAATGTAGTATATAGATCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCTGCCCTCGACTGACCTCAGCCTTTACAATGTAGTATATAGATCA  1040

seq1  GCAGCGAAACCTTCCAAGCTTGAAAACAATTATACTTCACTATAAAACAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCGAAACCTTCCAAGCTTGAAAACAATTATACTTCACTATAAAACAA  1090

seq1  CAACTATACTTCACTTGGTGTTATAAAGCTCTTGGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATACTTCACTTGGTGTTATAAAGCTCTTGGAATTC  1130

seq1: chr18_64055842_64056986
seq2: B6Ng01-292H04.g_64_1230

seq1  GAATTCTCTCTAACGAGGGTACTTTGGGAGGTTTTTCAGCTGCGGCGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTAACGAGGGTACTTTGGGAGGTTTTTCAGCTGCGGCGGGC  50

seq1  TTGGAGGATGGCACTATTGGGAGTTCCAGAAGGTCCTTGAACCCATTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGATGGCACTATTGGGAGTTCCAGAAGGTCCTTGAACCCATTGGT  100

seq1  GCAGTTGGTGCTGACAAGCAGGCATGTGAGAACTCAGCAGTGGGGCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGGTGCTGACAAGCAGGCATGTGAGAACTCAGCAGTGGGGCCAGA  150

seq1  AACTTGATGGTTGAACACCTATTGCCAATGAAGATCAGTGACTTGAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGATGGTTGAACACCTATTGCCAATGAAGATCAGTGACTTGAGATG  200

seq1  CCATGTCTTAGGAACAGGGCAGTGCTATCTATCCCAGGGCTGCCTCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCTTAGGAACAGGGCAGTGCTATCTATCCCAGGGCTGCCTCTGAA  250

seq1  GTTTTAGTTTTAGTTTTAGTTTTAGTTTTAGTTTTCGTTTTCGTTTTCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTTTTAGTTTTAGTTTTAGTTTTAGTTTTCGTTTTCGTTTTCGT  300

seq1  TTTCGTTTTAGTTCAATTGGCATTAGTTTTGCCTTCCAGGACTCAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTTTTAGTTCAATTGGCATTAGTTTTGCCTTCCAGGACTCAAAACT  350

seq1  TAGGGCTGATTCATTAACATAATCTCAGCACTGGTATACTGAGATGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTGATTCATTAACATAATCTCAGCACTGGTATACTGAGATGGAAG  400

seq1  GCAGAGGCAGGTATATTCCTTGGAACCTTGCACCCTGTGACAAGCTGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGTATATTCCTTGGAACCTTGCACCCTGTGACAAGCTGCCC  450

seq1  TGCTATATGCAGCCGCAAACAACAAGAGGCCCTGTTTCAGACAAGGGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATGCAGCCGCAAACAACAAGAGGCCCTGTTTCAGACAAGGGTGA  500

seq1  CCTTCCGCCTCCATATAAATGCCATGGCACATATATAAACACTGCATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCGCCTCCATATAAATGCCATGGCACATATATAAACACTGCATACA  550

seq1  TATAGAGTGGGTGAGGGGAAAAGAAACACAGAAAGAGATACCCCAAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGTGGGTGAGGGGAAAAGAAACACAGAAAGAGATACCCCAAACTA  600

seq1  AATGGGATTGCTGCACCCTATTTACAGTCAGCAGGCAGATAGTGATCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATTGCTGCACCCTATTTACAGTCAGCAGGCAGATAGTGATCTTC  650

seq1  TGCTCCTACTTGTTTGGCTAAATGTAACTGCCATTCAAACAAGCTGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTACTTGTTTGGCTAAATGTAACTGCCATTCAAACAAGCTGTTTG  700

seq1  TGCCAGAATACTTAGTCTCTGTCTGTCTGTCTGTCTCTGTCTCTGTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAATACTTAGTCTCTGTCTGTCTGTCTGTCTCTGTCTCTGTCTCT  750

seq1  GTCTCTGCCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACA  800

seq1  CACACACACTCCCACTCACTCACTCATATGGAAATAG-CCAATCCCTAAA  849
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACACACACTCCCACTCACTCACTCATATGGAAATAGCCCAATCCCTAAA  850

seq1  TGAATCTTGCTTGGTCTGCCATTAAAACAGTTTTTAACAGAACCTGTGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTTGCTTGGTCTGCCATTAAAACAGTTTTTAACAGAACCTGTGCA  900

seq1  GTTCTCTCTGGCTGGTCTGCTACCTCTTGCTACC-TTTGGAAGCTTACC-  947
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  GTTCTCTCTGGCTGGTCTGCTACCTCTTGCTACCTTTTGGAAGCTTACCT  950

seq1  TGGTCTTCCCGGGCCCGCCCTTTCCCCAGCCCTGTATGACGTG-CTCT-G  995
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  TGGTCTTCCCGGGCCCGCCCTTTCCCCAGCCCTGTATGACGTGCCTCTGG  1000

seq1  TGTG-CAGCCCCGGCTGCCTTCCA-CTGTGAAATGAGG-CAAGGTCATT-  1041
      |||| ||||||||||||||||||| ||||||||||||| |||||||||| 
seq2  TGTGCCAGCCCCGGCTGCCTTCCACCTGTGAAATGAGGCCAAGGTCATTC  1050

seq1  CACGC--TCCTCGCCA--GAGCCTTCCACAGTT-CCTCATGGTCCT-GCA  1085
      |||||   ||||||||   |||||||||||||| |||||||||||| |||
seq2  CACGCCTCCCTCGCCAAGAAGCCTTCCACAGTTCCCTCATGGTCCTGGCA  1100

seq1  C--AGCCCATTGTGTGAA--GACT--ACTGTG-CCATGGCCTG-CTGCCC  1127
      |  |||||| ||||||||   |||   ||||| |||||| ||| ||||| 
seq2  CCAAGCCCA-TGTGTGAAAGAACTTACCTGTGCCCATGGACTGCCTGCCA  1149

seq1  TCCTTCTTGCTGTCAGTC  1145
      ||| || |||||||||||
seq2  TCCCTCATGCTGTCAGTC  1167