BAC Information

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BAC

Clone NameB6Ng01-292P15
Chromosome18 (Build37)
Map Location 69,264,640 - 69,265,784
singlet/doubletsinglet
Overlap genenone
Upstream geneD18Ertd653e, 4933403F05Rik, Rnmt, Mc5r, Mc2r
Downstream geneLOC100043380, EG225681, Tcf4, Ccdc68, Rab27b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292P15.bB6Ng01-292P15.g
ACCGA089474GA089475
length1,1521,124
definitionB6Ng01-292P15.b B6Ng01-292P15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactaaggaatactggatggctgagaagcacctgaaaaaatg
ttcaacatccttagtcatcatggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccactgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagtttctca
gaaaattggacatggtactactggaggatcccgcaatacctaccctgggc
atatattcagaagatgttctaactggtaagaaggacacgtgctccactat
gttcatagcagcctatttataatagccagaagctggaaagaacccagatg
cccctccacagaggaatggatacagaaaatgtggtacatttacacaagta
ctactaagctattaaaaagaatgaatttatgaaattcctaggcaaatgga
tggacctggagggcatcatcatgagtgaggtaacccaatcacgaaagaac
acacatgatatgcactcactgataagtggatagtagcccagaaacttaga
atacccaagatataagatacaatttgctaaacgcatgaaactcaagaaga
acgaagaccaaagtgtggacactttgccccttcttagaattgggaacaaa
acacccatggaaggagttacagagacaaagtttggagcagagacgaaagg
atggaccatctagagactgccatatctggggatccgtcccataatcagct
tccaaacgctgacaccattgcatatactagcaaaattttgctgaaaggac
tcagatatggctgtctcttgtgagactgtgccggagcctggcaaacacag
aagtggatgctcacagtcagctattggatggatcacagggcccccaatgg
aggagctagagaaagtacccaaggagctgaagggatctgcaatcctatag
tggaacaacaatgtgacctaaccaatgaatcagagatgggcctagttggc
catcagtggaaagaggagccaattggttcgtgcaaactttataatgcctc
agtacaggggaatgccaggcccagaagttgcatgtgtgtgtataggggaa
tg
gaattctcctgcctctgattctctcccagaattctatctctccccggaag
tcccacctaatctctcttgcttttctatagactatcagctcttcattaaa
accaatcaaaaggtgagagagggagggtttacaaaatatgatgtagccat
tgaataacagtaccaaaccccctttggcactcaactctggaggcatagaa
atcagcatttgaagaatgcaaacacagtctttatgcagagtacaagaaga
ttatcctaacaccagaggatctctgtgagttcaaggccagcctgctctac
aatgtgagttccaagacaaccaggcttttaaacaggaaaaaaaatctctc
cctttaaatattagaataaaccttcactacatcatgaaaatattgatgga
gaaaatggtaggcagaaaaggagcagaatagaaattcttgagtatggagt
gggtttggtcacacaggttttatggcactcaaggaacagcgccagggtca
agctcctctagaaagaagataacagagactaaatgaagaacacacctaga
aatgacggcatcttgggattcattctaagaaacaatgaacaaaacaacag
tatgtagggtgctaactgccttttcatttaattatatacaggggattttt
ttttcaaagtagaatttaatccttagccttattagaaaacacaaaggtta
aaagaaaaacatttctagagttaattgaatgaatgagttggattatctga
atgaaaacaccttaaatatatgcatactgtgtatgttataatgactgagg
caaatgttacagttctcttctgaaaaacaatcaagcagatatggcaaagg
tctgtatatgtgcgctaataatgttgcagttttgtgcatattaaaatatc
aataacctacgtgttcatcagtgagactggtatataaaactgagatattc
aatactaattctcatctttacccaaatcgagatgctctgaatatgacttc
agcaaacgccgtgatattttgagcaaatgatattttacaagccatcttgc
agaatgtcgtcagcactttaacattgtgtacaagaactacggctgctaaa
ctatgcatttggaccatcgtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_69264640_69265784
seq2: B6Ng01-292P15.g_66_1189

seq1  GAATTCTCCTGCCTCTGATTCTCTCCCAGAATTCTATCTCTCCCCGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCCTCTGATTCTCTCCCAGAATTCTATCTCTCCCCGGAAG  50

seq1  TCCCACCTAATCTCTCTTGCTTTTCTATAGACTATCAGCTCTTCATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCTAATCTCTCTTGCTTTTCTATAGACTATCAGCTCTTCATTAAA  100

seq1  ACCAATCAAAAGGTGAGAGAGGGAGGGTTTACAAAATATGATGTAGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCAAAAGGTGAGAGAGGGAGGGTTTACAAAATATGATGTAGCCAT  150

seq1  TGAATAACAGTACCAAACCCCCTTTGGCACTCAACTCTGGAGGCATAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAACAGTACCAAACCCCCTTTGGCACTCAACTCTGGAGGCATAGAA  200

seq1  ATCAGCATTTGAAGAATGCAAACACAGTCTTTATGCAGAGTACAAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCATTTGAAGAATGCAAACACAGTCTTTATGCAGAGTACAAGAAGA  250

seq1  TTATCCTAACACCAGAGGATCTCTGTGAGTTCAAGGCCAGCCTGCTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTAACACCAGAGGATCTCTGTGAGTTCAAGGCCAGCCTGCTCTAC  300

seq1  AATGTGAGTTCCAAGACAACCAGGCTTTTAAACAGGAAAAAAAATCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGTTCCAAGACAACCAGGCTTTTAAACAGGAAAAAAAATCTCTC  350

seq1  CCTTTAAATATTAGAATAAACCTTCACTACATCATGAAAATATTGATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAATATTAGAATAAACCTTCACTACATCATGAAAATATTGATGGA  400

seq1  GAAAATGGTAGGCAGAAAAGGAGCAGAATAGAAATTCTTGAGTATGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGGTAGGCAGAAAAGGAGCAGAATAGAAATTCTTGAGTATGGAGT  450

seq1  GGGTTTGGTCACACAGGTTTTATGGCACTCAAGGAACAGCGCCAGGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGGTCACACAGGTTTTATGGCACTCAAGGAACAGCGCCAGGGTCA  500

seq1  AGCTCCTCTAGAAAGAAGATAACAGAGACTAAATGAAGAACACACCTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCTAGAAAGAAGATAACAGAGACTAAATGAAGAACACACCTAGA  550

seq1  AATGACGGCATCTTGGGATTCATTCTAAGAAACAATGAACAAAACAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACGGCATCTTGGGATTCATTCTAAGAAACAATGAACAAAACAACAG  600

seq1  TATGTAGGGTGCTAACTGCCTTTTCATTTAATTATATACAGGGGATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGGTGCTAACTGCCTTTTCATTTAATTATATACAGGGGATTTTT  650

seq1  TTTTCAAAGTAGAAATTTAATCCTTAGCCTTATTAGAAAACACAAAGGTT  700
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAGTAG-AATTTAATCCTTAGCCTTATTAGAAAACACAAAGGTT  699

seq1  AAAAGAAAAACATTTCTAGAGTTAATTGAATGAATGAGTTGGATTATCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAACATTTCTAGAGTTAATTGAATGAATGAGTTGGATTATCTG  749

seq1  AATGAAAACACCTTAAATATATGCATACTGTGTATGTTATAATGACTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAACACCTTAAATATATGCATACTGTGTATGTTATAATGACTGAG  799

seq1  GCAAATGTTACAGTTCTCTTCTGAAAAACAATCAAGCAGATATGGCAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTTACAGTTCTCTTCTGAAAAACAATCAAGCAGATATGGCAAAG  849

seq1  GTCTGTATATGTGCGCTAAATAATGTTGCAGTTTTGTGCATATTAAAATA  900
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTCTGTATATGTGCGCT-AATAATGTTGCAGTTTTGTGCATATTAAAATA  898

seq1  TCAAATAACCTACGTGTTCATCAGTGAGAACTGGGTATATAAAAACTGAG  950
      || ||||||||||||||||||||||||| ||| ||||||| |||||||||
seq2  TC-AATAACCTACGTGTTCATCAGTGAG-ACT-GGTATAT-AAAACTGAG  944

seq1  ATATTCAAATACTAAATTCTTCATCTTTACCCAAATCGAGGATGCTCTGA  1000
      |||||| |||||| ||||| ||||||||||||||||||| ||||||||||
seq2  ATATTC-AATACT-AATTC-TCATCTTTACCCAAATCGA-GATGCTCTGA  990

seq1  AATTATGGACTTCAGCAAAACGCCCGTGATATTTTGAAGGCAAAAGGGAA  1050
      |  ||| ||||||||| ||||| ||||||||||||||  ||||| |   |
seq2  A--TAT-GACTTCAGC-AAACG-CCGTGATATTTTGA--GCAAATG---A  1030

seq1  TA-TTTACAAAGCATCTTGCAGAATGTCGTCCAGAAATTTACATTTGTGT  1099
      || |||||||  |||||||||||||||||| ||| | ||||   ||||||
seq2  TATTTTACAAGCCATCTTGCAGAATGTCGT-CAGCACTTTAACATTGTGT  1079

seq1  A-GAGAACAAAGGGCTTGCAAAAAATATGCATTT-GACCATCGTGGGA  1145
      |  ||||| | ||   |||  ||| ||||||||| |||||||||||||
seq2  ACAAGAACTACGG--CTGC-TAAACTATGCATTTGGACCATCGTGGGA  1124