BAC Information

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BAC

Clone NameB6Ng01-293M04
Chromosome18 (Build37)
Map Location 32,094,232 - 32,094,689
singlet/doubletsinglet
Overlap geneLims2
Upstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3
Downstream geneGpr17, Myo7b, Iws1, Proc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293M04.bB6Ng01-293M04.g
ACCGA090062GA090063
length1,198451
definitionB6Ng01-293M04.b B6Ng01-293M04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctactgaggaatactgaatagctgagaagaacctgaaaagttg
ttcaacatacctaatcatcagaaaaatgcaaatcaaaacaaccctgagat
tccaccttacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtgaagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctgaaaatcagtctggcagatcctca
gaaaactggacaaaatactaccagaagatccagcaatgcctctcctgggc
atatatccagaagatgtcccaacttgtaataaggacacatgctccactat
gttcatagcagccttatttataatagcctgaagcttgaaataacacagaa
gtctctcttcagaggaatggatacagaaaatgtggtacatttacacaaag
gaattcagcaattaaaaccaatgaatttattaaattcataggcaaatgga
tggatctggagtatatatatcatccagagtgaggtaacccaatcacaaaa
gaacacacatgatatgcattcaccaataagcagatattagcccataaatt
tagactatctaagatacaatttgcaaaacacatgaaactcaagaagaagg
aagaccaacaagtggatacttcgtttcttcttagaatggggaacaaaata
ctcctggaaggagttacagagacacagtttggagctgagatgggaaagac
catccaggggcttcttcacttggggagccatcccatatacaaccaccaat
ctcagacaccattgcatatgtcagcaagattttgttgccaggaccctgat
atatctatctcttgttaggctatgccagtgcctggcaaatacagaagtgg
atgctcacagtcatctatttggatgggacacaggctcctaatgaagaagc
tagagaaagtacccaagtagctaaaaggggtctgcaccctataggagtca
acatatgactaaccagtacccttcagactatgtatctagttgcatatgta
gcagaggatggctagtagcatcaatggagaaagtcctctgatttgtgagt
catattgctcagtacaggattgcaagcaggagcatgacggtggttgttac
agcagggaagcttatgggactttgtggatgtatatttgaaagtgtcag
ttcctccatccatgattaactaatttgttcacagttgtgatgactgtgtt
atacccagaagttgttatctcatagcacttctctctatttctggttatcc
aattctttctctctagtcttcttcaatgttccctaaactttagagaggga
agtataagtgtcttgttaaagactgagcatttaaacattatttatcttca
gatcccttggtagttaatagattttgcattcactaccattcattgcaaag
aaaaagagactttcctgaccaagactaatactgaatttcatctccatgta
taaaaaaaaaatctgacactaagtttatcaaaataataataataagctcc
ccatctcagaactcattacctccctaactatattttattaattaatccat
ttattcattcacttatttatttgtgtgtgtgtgtgtgtgtgtgtgtgtgt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32094232_32094689
seq2: B6Ng01-293M04.g_470_522 (reverse)

seq1  CACACACACACACACAAAAGGCCATGTAGCAGTTAGCACAGTCTGTCATG  50
                                                        
seq2  --------------------------------------------------  0

seq1  ACTCTGTCCCACACGGTACTTGCAGGGTTCAAAGTCCATTTTCTAATGCA  100
                                                        
seq2  --------------------------------------------------  0

seq1  TCTGCTGCTGGGGGAGGGCACTCCCCATACTTGCATGCTGGACTCTATTT  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGCAAGGAGTCATACCACCCCACACCACACAGAGGAAGATGGCTACCTTG  200
                                                        
seq2  --------------------------------------------------  0

seq1  GAATTTCCCTCTGCCCCCCAAGTATGTTCTGCTTTTGGATGCTTTGGCTT  250
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTTGTATGTTTTTCTGTCCACTGCAGGGAGCATGCAACTGGCGTTACA  300
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAAGAGGTAGCCTGTCCCAAGGTAGACAGGCTAGAGGGCTTGCTTCTC  350
                                                        
seq2  --------------------------------------------------  0

seq1  AGGTGCTCCACCCTTGCACTGATAGTCCTCAGTTGTATGCCTAGTCACAC  400
                                                   |||| 
seq2  ---------------------------------------------CACA-  4

seq1  TGTCTGATCTTACCAAGAAAACACACACACACACACACAAATAAATAAGT  450
                   ||   | ||||||||||||||||||||||||||||||
seq2  -------------CACACACACACACACACACACACACAAATAAATAAGT  41

seq1  AAATAAAT----  458
       ||| |||    
seq2  GAATGAATAAAT  53