BAC Information

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BAC

Clone NameB6Ng01-295N08
Chromosome18 (Build37)
Map Location 21,860,683 - 22,022,405
singlet/doubletdoublet
Overlap gene4921528I01Rik
Upstream geneB4galt6, D030074E01Rik, Rnf125, Rnf138, Mep1b, EG622978, Gm944, LOC665722, LOC225264, Klhl14
Downstream geneLOC546708, LOC100040547, Asxl3, Nol4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295N08.bB6Ng01-295N08.g
ACCGA091602GA091603
length811684
definitionB6Ng01-295N08.b B6Ng01-295N08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,021,756 - 22,022,405)(21,860,683 - 21,861,365)
sequence
gaattcttcactactaagcagagagaaattttggttccatgatgtacacc
caaatgtatatggccatagaaagactggaaatctgataaaatttgacagg
atcaattgtttatttacatttctcaccagctttgacttccatcccaatgg
ttttctaggattttccttttcatctgaccactttgtgaaatctttccata
aagtaagttgaagggaaaataatggaaaacaaactataagaacctagaaa
tggaggagtttagtgaccaattgaatggagatgcttgaaggatactggtg
ggcaacctggagagttctctaggtcactccacatagggaggtgtgtcata
ttgtcagtaactaagcaatgaaagtgaacaggtttgggagagataagcaa
cattgatctacttgtctctctatccatccatcagttagttatcatctgtt
tgtctatccatataacatctgtcaatctgtctgttggtctatctctttat
ccatccatcagttcattatgtattatctatctatccaactgcccatcaaa
aattggcccatatgtctgtctatctgtctgtctgtctgtctatctttact
ggctagttttgtgtcaacttgacacagctggagttatcaaacagaaagga
gcttcagttgaggaaatgcctccatgagatacaactgcaaggcattttct
caattagtgatcaaggtggaaaggccccttgtgggtgggactatctctgg
gctggtattcttgattctataagagagcatgctgagcaagccaggggaag
caagccagtaa
gaattcattttcttgaataagaagggggattctttagatttagtagtttt
cgaaaaacaatcaccttcctcttgttttttaaaaaggcgttagggactct
cagcacttttgattcttgctggttcttgacatgagacaacccttctacgg
tagggttgtttctgccttgattagttttgagttgttaagttgtggaaatg
tgccacagaggaatgcctttatgaaaacaattgagtaagtcatttagaaa
gacctttatcctagtctatagccatacctgtatgcacccatcttatgtta
gaagctaagaagggtcaggcctggttaatacttggatgggagacaggact
gacgctaacttgagttttgccattgtggataagaatagctgcctggccac
attggaagggggttggttgttctgattagtttttgttaactagacacaat
cgtagacatccctggaaacaagaatctcaatggataaattgcctccatca
tgttggcctatagtcaagtctatggaggtgatttctgcctttcttttttt
tttttattagcttattattatttacttttctcatgttatctccctcccta
aattcccctgcgatcatgctctttccccaccccattactaagaagcataa
catgtccactcaaaaactcctggccctggcattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22021756_22022405
seq2: B6Ng01-295N08.b_46_695 (reverse)

seq1  TCCTTTCTGTTTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTGTTTGATAACTCCAGCTGTGTCAAGTTGACACAAAACTAGCC  50

seq1  AGTAAAGATAGACAGACAGACAGACAGATAGACAGACATATGGGCCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGATAGACAGACAGACAGACAGATAGACAGACATATGGGCCAATT  100

seq1  TTTGATGGGCAGTTGGATAGATAGATAATACATAATGAACTGATGGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGGCAGTTGGATAGATAGATAATACATAATGAACTGATGGATGG  150

seq1  ATAAAGAGATAGACCAACAGACAGATTGACAGATGTTATATGGATAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAGATAGACCAACAGACAGATTGACAGATGTTATATGGATAGACA  200

seq1  AACAGATGATAACTAACTGATGGATGGATAGAGAGACAAGTAGATCAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATGATAACTAACTGATGGATGGATAGAGAGACAAGTAGATCAATG  250

seq1  TTGCTTATCTCTCCCAAACCTGTTCACTTTCATTGCTTAGTTACTGACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTATCTCTCCCAAACCTGTTCACTTTCATTGCTTAGTTACTGACAA  300

seq1  TATGACACACCTCCCTATGTGGAGTGACCTAGAGAACTCTCCAGGTTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACACACCTCCCTATGTGGAGTGACCTAGAGAACTCTCCAGGTTGCC  350

seq1  CACCAGTATCCTTCAAGCATCTCCATTCAATTGGTCACTAAACTCCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTATCCTTCAAGCATCTCCATTCAATTGGTCACTAAACTCCTCCA  400

seq1  TTTCTAGGTTCTTATAGTTTGTTTTCCATTATTTTCCCTTCAACTTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGGTTCTTATAGTTTGTTTTCCATTATTTTCCCTTCAACTTACTT  450

seq1  TATGGAAAGATTTCACAAAGTGGTCAGATGAAAAGGAAAATCCTAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAAGATTTCACAAAGTGGTCAGATGAAAAGGAAAATCCTAGAAAA  500

seq1  CCATTGGGATGGAAGTCAAAGCTGGTGAGAAATGTAAATAAACAATTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGGGATGGAAGTCAAAGCTGGTGAGAAATGTAAATAAACAATTGAT  550

seq1  CCTGTCAAATTTTATCAGATTTCCAGTCTTTCTATGGCCATATACATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAAATTTTATCAGATTTCCAGTCTTTCTATGGCCATATACATTTG  600

seq1  GGTGTACATCATGGAACCAAAATTTCTCTCTGCTTAGTAGTGAAGAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTACATCATGGAACCAAAATTTCTCTCTGCTTAGTAGTGAAGAATTC  650

seq1: chr18_21860683_21861365
seq2: B6Ng01-295N08.g_66_749

seq1  GAATTCATTTTCTTGAATAAGAAGGGGGATTCTTTAGATTTAGTAGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTCTTGAATAAGAAGGGGGATTCTTTAGATTTAGTAGTTTT  50

seq1  CGAAAAACAATCACCTTCCTCTTGTTTTTTAAAAAGGCGTTAGGGACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAACAATCACCTTCCTCTTGTTTTTTAAAAAGGCGTTAGGGACTCT  100

seq1  CAGCACTTTTGATTCTTGCTGGTTCTTGACATGAGACAACCCTTCTACGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTTTGATTCTTGCTGGTTCTTGACATGAGACAACCCTTCTACGG  150

seq1  TAGGGTTGTTTCTGCCTTGATTAGTTTTGAGTTGTTAAGTTGTGGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTGTTTCTGCCTTGATTAGTTTTGAGTTGTTAAGTTGTGGAAATG  200

seq1  TGCCACAGAGGAATGCCTTTATGAAAACAATTGAGTAAGTCATTTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGAGGAATGCCTTTATGAAAACAATTGAGTAAGTCATTTAGAAA  250

seq1  GACCTTTATCCTAGTCTATAGCCATACCTGTATGCACCCATCTTATGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTATCCTAGTCTATAGCCATACCTGTATGCACCCATCTTATGTTA  300

seq1  GAAGCTAAGAAGGGTCAGGCCTGGTTAATACTTGGATGGGAGACAGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAAGAAGGGTCAGGCCTGGTTAATACTTGGATGGGAGACAGGACT  350

seq1  GACGCTAACTTGAGTTTTGCCATTGTGGATAAGAATAGCTGCCTGGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCTAACTTGAGTTTTGCCATTGTGGATAAGAATAGCTGCCTGGCCAC  400

seq1  ATTGGAAGGGGGTTGGTTGTTCTGATTAGTTTTTGTTAACTAGACACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAGGGGGTTGGTTGTTCTGATTAGTTTTTGTTAACTAGACACAAT  450

seq1  CGTAGACATCCCTGGAAAGAAGAATCTCAATGGATAAATTGCCTCCATCA  500
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CGTAGACATCCCTGGAAACAAGAATCTCAATGGATAAATTGCCTCCATCA  500

seq1  GGTTGGCCTATAGTCAAGTCTATGGAGGTGATTTCTGCCTTTCTTTTTTT  550
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCCTATAGTCAAGTCTATGGAGGTGATTTCTGCCTTTCTTTTTTT  550

seq1  TTTTTATTAGATATATT-TTATTTACATTTCAAATGTTATCTCCTTTCCT  599
      |||||||||| | |||| |||||||| ||||  ||||||||||| | |||
seq2  TTTTTATTAGCT-TATTATTATTTACTTTTCTCATGTTATCTCCCTCCCT  599

seq1  AGTTTCCCCTCTGATAATCCTCTATCCCCTCCCCATTCCCCTGGTCCCCA  649
      |  |||||||  ||| || |||| ||||| ||||||| |   |   |  |
seq2  AAATTCCCCTGCGATCATGCTCTTTCCCCACCCCATTACTAAGAAGCATA  649

seq1  ACCCACCCACTC-CCACTTCCTGGCCCTGGCATTC  683
      ||    ||||||   |  |||||||||||||||||
seq2  ACATGTCCACTCAAAAACTCCTGGCCCTGGCATTC  684