BAC Information

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BAC

Clone NameB6Ng01-295P14
Chromosome18 (Build37)
Map Location 89,263,856 - 89,264,915
singlet/doubletsinglet
Overlap geneRttn
Upstream geneLOC100039961, LOC100039972, LOC623177, LOC665497, LOC100040003, LOC623208, Socs6
Downstream geneCd226, Dok6, LOC383320, LOC620693
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295P14.bB6Ng01-295P14.g
ACCGA091704GA091705
length1,152907
definitionB6Ng01-295P14.b B6Ng01-295P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgaaaatggtgacacagcatactcaaacatataggacacaat
gaaagtagtactaagaggaaaatttataacactcagtgccccggtaaaga
aattggagagatcctacactagcaacttaacagcacacctgaggcctcta
gaacaaaaggaagcaaatatacccaagaggaatagactgcaggaaatagt
caaactcagagcctaaatcagcaaatagaaaacagagaatgatacaaaaa
gaatcaagaaaaccaaaagctggttctttgggaaaatcaacaagggttca
gagacagtatccaaattaaccaaatcagaaatgagatgggagacaggaca
gaaactgaggaaattcaaaacaaaatcagatcctactacaaaagctaata
ctcaataaactggaaaatctagacagataaccacacaccaaattaaatca
agagctggtaaattatctgaacaggcccatattccctgaggaagtagaag
tcattaaaaacatcccaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaag
ccctgaaccagatggctttagtgcagaattctactagagctatagaatat
tatttttgtactgaaggataactaaaagcaaaaatacattttattggtaa
caatacctagactattaggcttgatgtaatttccccatacttttgcattt
tgaggatattttcataatcagatccttctttgcaaactgggttattttgg
ctttaaataccctatgtgctgcttctgggatattggtttcacaacttacc
ctctttaaaaatataaagattttctttaaatagaaatcagctttgaaaat
attgtgttgcttcttctggtatacttgatagtgctagtgtgaccattact
gttatgcttataatattggaaaactatgttttgcctgttgcatattaagt
tgtagcacatattttatgatgagtgtttttttagtaccttactgaatata
ttttataaagaagttatttcatatatccacatggaaaagttaaaacacta
tgatgccactgagaataggttttttttttatgagaatctaactaggtaac
catatttaactccttttacatataggcttcttttcctgatacctatcctc
tt

gaattctcattctgaactgaaacacaataaaaaaattaaaaatatttaat
aagtactgaatttatataaggagtcctggtgggtctaggataaagggggc
atgtcttaacatgataaaaacaatatacaacagggctacagtatcatcat
gttaactagaaaaaaatttcaaagcacttccactaaaatcaagaattaag
caaagatgtccactgtctccactccacttaatatagtaagtcttagctaa
aacaaaagagacaacaaattagaaaggaagaagtcaaagcattcttgtag
atgataagatactacacatataaacctcaaaacactccaccagaaaatac
ctacagctgataaacacattcagcaaaatagaaaggtacaaaatttagtt
gtcttccttatgtactaatgataaacttactaagaatgaagtccagaaaa
tgctctcctacacaatggcttccagacagacagacagacagaaaaaacaa
tcttggaataaataaaatcaaagagtataagacttgtacagttaaacatt
aagactccaaagaaactgaagaagattccaaaaaatagaaagtactactg
tgttcatgggttggtagaataaatattgtgtaaatggccatttcatccaa
agcaatccccatcaaaattccaacacagttccttgcagaaattgagaaaa
gtaaccccaaaacacaagtaaaggtatcgctgtcctagacttcaagttgt
actacagaggtaaaataatacaaacagcatggtaccatcataaaactgac
acattgattattgaaatggaactgagtgacacagcactcctagagctacc
tgttttgttttggtttctagtgttgtttgtgttgatgatgatggggggcg
ggaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_89263856_89264915
seq2: B6Ng01-295P14.b_141_1200

seq1  GGTAAAGAAATTGGAGAGATCCTACACTAGCAACTTAACAGCACACCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGAAATTGGAGAGATCCTACACTAGCAACTTAACAGCACACCTGA  50

seq1  GGCCTCTAGAACAAAAGGAAGCAAATATACCCAAGAGGAATAGACTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTAGAACAAAAGGAAGCAAATATACCCAAGAGGAATAGACTGCAG  100

seq1  GAAATAGTCAAACTCAGAGCCTAAATCAGCAAATAGAAAACAGAGAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGTCAAACTCAGAGCCTAAATCAGCAAATAGAAAACAGAGAATGA  150

seq1  TACAAAAAGAATCAAGAAAACCAAAAGCTGGTTCTTTGGGAAAATCAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAAGAATCAAGAAAACCAAAAGCTGGTTCTTTGGGAAAATCAACA  200

seq1  AGGGTTCAGAGACAGTATCCAAATTAACCAAATCAGAAATGAGATGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTCAGAGACAGTATCCAAATTAACCAAATCAGAAATGAGATGGGAG  250

seq1  ACAGGACAGAAACTGAGGAAATTCAAAACAAAATCAGATCCTACTACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACAGAAACTGAGGAAATTCAAAACAAAATCAGATCCTACTACAAA  300

seq1  AGCTAATACTCAATAAACTGGAAAATCTAGACAGATAACCACACACCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATACTCAATAAACTGGAAAATCTAGACAGATAACCACACACCAAA  350

seq1  TTAAATCAAGAGCTGGTAAATTATCTGAACAGGCCCATATTCCCTGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCAAGAGCTGGTAAATTATCTGAACAGGCCCATATTCCCTGAGGA  400

seq1  AGTAGAAGTCATTAAAAACATCCCAACCAAAAAAAAAAAAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGTCATTAAAAACATCCCAACCAAAAAAAAAAAAAAAAAAAAAA  450

seq1  AAAAAAAGCCCTGAACCAGATGGCTTTAGTGCAGAATTCTACTAGAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGCCCTGAACCAGATGGCTTTAGTGCAGAATTCTACTAGAGCTA  500

seq1  TAGAATATTATTTTTGTACTGAAGGATAACTAAAAGCAAAAATACATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATTATTTTTGTACTGAAGGATAACTAAAAGCAAAAATACATTTT  550

seq1  ATTGGTAACAATACCTAGACTATTAGGCTTGATGTAATTTCCCCATACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTAACAATACCTAGACTATTAGGCTTGATGTAATTTCCCCATACTT  600

seq1  TTGCATTTTGAGGATATTTTCATAATCAGATCCTTCTTTGCAAACTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTTGAGGATATTTTCATAATCAGATCCTTCTTTGCAAACTGGGT  650

seq1  TATTTTGGCTTTAAATACCCTATGTGCTGCTTCTGGGATATTGGTTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGCTTTAAATACCCTATGTGCTGCTTCTGGGATATTGGTTTCAC  700

seq1  AACTTACCCTCTTTAAAAATATAAAGATTTTCTTTAAATAGAAATCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACCCTCTTTAAAAATATAAAGATTTTCTTTAAATAGAAATCAGCT  750

seq1  TTGAAAATATTGTGTTGCTTCTTCTGGTATACTTGATAGTGCTAGTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATATTGTGTTGCTTCTTCTGGTATACTTGATAGTGCTAGTGTGA  800

seq1  CCATTACTGTTATGCTTATAATATTGG-AAACTATGTTTTGCCTGTTGCA  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCATTACTGTTATGCTTATAATATTGGAAAACTATGTTTTGCCTGTTGCA  850

seq1  TATTAAGTTTGTAGCACATATTTTATGATGAGTGTTTTTTTAGTACCTTA  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAG-TTGTAGCACATATTTTATGATGAGTGTTTTTTTAGTACCTTA  899

seq1  CTGAATATATTTTATAAAGAAATTATTTCATATAT-CACATGGAAAAG-T  947
      ||||||||||||||||||||| ||||||||||||| |||||||||||| |
seq2  CTGAATATATTTTATAAAGAAGTTATTTCATATATCCACATGGAAAAGTT  949

seq1  AAAACACTATGATGCCACTGAG-ATAGGTTTTTTTTTTATGAG-ATCT-A  994
      |||||||||||||||||||||| |||||||||||||||||||| |||| |
seq2  AAAACACTATGATGCCACTGAGAATAGGTTTTTTTTTTATGAGAATCTAA  999

seq1  CTTAGTTACCATATTTTATCTCTTTTTACATATAGGCTTCCTTTTTCTTG  1044
      ||  || |||||| |||| ||| |||||||||||||||||  ||||| ||
seq2  CTAGGTAACCATA-TTTAACTCCTTTTACATATAGGCTTC--TTTTCCTG  1046

seq1  GAATACCTATCCTCTT  1060
        ||||||||||||||
seq2  --ATACCTATCCTCTT  1060


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