BAC Information

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BAC

Clone NameB6Ng01-298D07
Chromosome18 (Build37)
Map Location 75,132,036 - 75,293,318
singlet/doubletdoublet
Overlap geneRpl17, BC031181, Dym
Upstream geneMapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg
Downstream geneLOC628356, EG667777, Smad7, Gm672, Zbtb7c, 4833419G08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298D07.bB6Ng01-298D07.g
ACCGA093373GA093374
length1,1661,141
definitionB6Ng01-298D07.b B6Ng01-298D07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,132,036 - 75,133,208)(75,292,169 - 75,293,318)
sequence
gaattcttgcagctctccctccttcagcatggccgttcacatcctgggca
tgttcccccattggaccactgatctctgagatgatgctaacgggactcgc
tctctcgggtctgtgctcaggtctgtttttgtgtaagtctgtctttctga
ggcttcctggccaccaactttaaagtgaaaccccctaccttgcaattacc
gtgcttttcactcccactttactgtcacaacgcttgccatcagtggtcat
gttccgcatcttgactgtttatttgttcatgacctgcttcccccactaag
atgcaaaggatttttgttcattttgattactgctatatccctactgccaa
ggtttatctattaaataaacacacaataaactaaaggacctaaattttat
ttcagagtcaagtaagcagtaaaatcgcccaaattcttcttgccgagcca
gaataacaccgacatcaaatatgacaaagactgaaaaacaaaagagaaaa
agaagaaaactacaaaccagcctgagttttaaataattcatgtaagtatt
agcagacgaagcttaatagcatgtgaaagggaaaaaccatgatcaagtaa
ttcctagattcagtctagagatggaaacaagtgtagatcgaaacaaagaa
atctaagaatataattcagcacgtttgtacatcaatagaagacaaactcc
tcctcacccaaaatcagcagggttgtgcgtggtgatgcatgtctgtaatc
tcagcctccagaaacgaagcaaaaggatggcaggctaaagccagtctggg
gctggagagaggactcaagtggtgaacttcaatcttgaataaaacctgaa
taactcagccgggcggccgtggtggtgcatgcctttagtcctagcactcg
ggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaa
agtgagttccaggccagccagggctatgcagagaaaccctgtctcggaaa
gaaaaaagaaaatcagtaataagaacattgctaatctcaacacaaagaag
cagatggtccctggtgagaatagagacagctgtctaatgtggtgagtcag
aacagcctttctgaaacaaaaccaatgaaacatagaatcgaattaaaatt
acaaaagtctaccacg
gaattctctatgaaaaagtcagatcacacgcactgctgggatttggtaaa
tactgcacatttatgatggctagagctctagagtccctcacaggagcttg
ctgagacccacccattcaagtaaactgctactatcaaaaacctctgccta
catccaatggcatcaccatttgcatcatttccggaaatattgactatcag
aagataccagggcacttgagaggctgaaagagaatggacttaggttcaac
tcatcccaggcaggccatgcagcaagttcaaggatagcctgtggtacaaa
gtggatctcttgcaaaggtaatggaagccagaagggatagggaagagctg
agagcaaagccctttctttcaccaggtaccttggacaagacctctgagat
gtgcccaacctgtggcccaggggccacatacagctgagaaaccagcacaa
aactgttgatcacacatttgtcaagactgtgacggtgtcacactgcgatg
tcagaaggtcagaaacgccgcagtgtttaactgcatgctgctgccgtggg
cctccgacggcatgcacgctgctctcaggtttcagctggccccgtttccc
ttgcctgtctcaagcactaggacctgctaccttctcactcactgctctaa
cacacggccagacggccgacacccactttcctgaggtggaaaactgctca
aacagaagggggaattaaagacttagaaatggcaccaatcccttcttggg
gtctgcagggcaactaacagcaagataaaaatttcatatccacatcttcc
ttttgctatcttcttcatcttaaaaactctgggcagagtccagctttact
ctgcacgcaaaactttaaccatccaagcagactcagtctgaaaggccgca
ccatcttccccagctcgtccctcttctacagtggagatggggagaaaggt
aaccaaggcagcttttaatttgtttggttttttgtttgttttgtttttga
gactgggtggtttcctctgtgtgtagctctggcttgtcctgcactcacct
ctgtagaccaggctactctactaacagaaatcttctgcctctggctctga
gaatacttggattagcgtgcgccacaatgcctaaggcttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75132036_75133208
seq2: B6Ng01-298D07.b_47_1212

seq1  GAATTCTTGCAGCTCTCCCTCCTTCAGCATGGCCGTTCACATCCTGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCAGCTCTCCCTCCTTCAGCATGGCCGTTCACATCCTGGGCA  50

seq1  TGTTCCCCCATTGGACCACTGATCTCTGAGATGATGCTAACGGGACTCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCCCATTGGACCACTGATCTCTGAGATGATGCTAACGGGACTCGC  100

seq1  TCTCTCGGGTCTGTGCTCAGGTCTGTTTTTGTGTAAGTCTGTCTTTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCGGGTCTGTGCTCAGGTCTGTTTTTGTGTAAGTCTGTCTTTCTGA  150

seq1  GGCTTCCTGGCCACCAACTTTAAAGTGAAACCCCCTACCTTGCAATTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCTGGCCACCAACTTTAAAGTGAAACCCCCTACCTTGCAATTACC  200

seq1  GTGCTTTTCACTCCCACTTTACTGTCACAACGCTTGCCATCAGTGGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTTCACTCCCACTTTACTGTCACAACGCTTGCCATCAGTGGTCAT  250

seq1  GTTCCGCATCTTGACTGTTTATTTGTTCATGACCTGCTTCCCCCACTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGCATCTTGACTGTTTATTTGTTCATGACCTGCTTCCCCCACTAAG  300

seq1  ATGCAAAGGATTTTTGTTCATTTTGATTACTGCTATATCCCTACTGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGGATTTTTGTTCATTTTGATTACTGCTATATCCCTACTGCCAA  350

seq1  GGTTTATCTATTAAATAAACACACAATAAACTAAAGGACCTAAATTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATCTATTAAATAAACACACAATAAACTAAAGGACCTAAATTTTAT  400

seq1  TTCAGAGTCAAGTAAGCAGTAAAATCGCCCAAATTCTTCTTGCCGAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTCAAGTAAGCAGTAAAATCGCCCAAATTCTTCTTGCCGAGCCA  450

seq1  GAATAACACCGACATCAAATATGACAAAGACTGAAAAACAAAAGAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACACCGACATCAAATATGACAAAGACTGAAAAACAAAAGAGAAAA  500

seq1  AGAAGAAAACTACAAACCAGCCTGAGTTTTAAATAATTCATGTAAGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAACTACAAACCAGCCTGAGTTTTAAATAATTCATGTAAGTATT  550

seq1  AGCAGACGAAGCTTAATAGCATGTGAAAGGGAAAAACCATGATCAAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACGAAGCTTAATAGCATGTGAAAGGGAAAAACCATGATCAAGTAA  600

seq1  TTCCTAGATTCAGTCTAGAGATGGAAACAAGTGTAGATCGAAACAAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGATTCAGTCTAGAGATGGAAACAAGTGTAGATCGAAACAAAGAA  650

seq1  ATCTAAGAATATAATTCAGCACGTTTGTACATCAATAGAAGACAAACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGAATATAATTCAGCACGTTTGTACATCAATAGAAGACAAACTCC  700

seq1  TCCTCACCCAAAATCAGCAGGGTTGTGCGTGGTGATGCATGTCTGTAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACCCAAAATCAGCAGGGTTGTGCGTGGTGATGCATGTCTGTAATC  750

seq1  TCAGCCTCCAGAAACGAAGGCAAAAGGATGGCAGGCTAAAGCCAGTCTGG  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCAGCCTCCAGAAACGAA-GCAAAAGGATGGCAGGCTAAAGCCAGTCTGG  799

seq1  GGCTGGAGAGAGGACTCAAGTGGTGAACTTCAATCTTGAATAAAACCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGAGAGGACTCAAGTGGTGAACTTCAATCTTGAATAAAACCTGA  849

seq1  ATAACTCAGCCGGGCGGCCGTGGTGGTGCATGCCTTTAGTCCTAGCACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCAGCCGGGCGGCCGTGGTGGTGCATGCCTTTAGTCCTAGCACTC  899

seq1  GGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA  949

seq1  AAGTGAGTTCCAGGCCAGCCAGGGCTATGCAGAGAAACCCTGTCTCGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGTTCCAGGCCAGCCAGGGCTATGCAGAGAAACCCTGTCTCGGAA  999

seq1  AG-AAAAAGAAATTCAGTAATAAGAACAATTGCTAATCTCAACACAAAGA  1049
      || ||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  AGAAAAAAGAAAATCAGTAATAAGAAC-ATTGCTAATCTCAACACAAAGA  1048

seq1  GGCAGATGGGTCCCT-GTGAG-ATAGAGACCAGGTTGGTCT-ATGTGGTG  1096
       |||||| ||||||| ||||| ||||||| ||| |  |||| ||||||||
seq2  AGCAGAT-GGTCCCTGGTGAGAATAGAGA-CAGCT--GTCTAATGTGGTG  1094

seq1  AGTTCCAGGACAGCCTTTCTGAAAACAAAACAATGAAAACATAGGATCGC  1146
      |||  ||| |||||||||||||||  ||| ||||| |||||||| |||| 
seq2  AGT--CAGAACAGCCTTTCTGAAACAAAACCAATG-AAACATAGAATCG-  1140

seq1  ATATTTAATATACAAAAGTCTACCACG  1173
        ||| ||  |||||||||||||||||
seq2  -AATTAAAATTACAAAAGTCTACCACG  1166

seq1: chr18_75292169_75293318
seq2: B6Ng01-298D07.g_67_1207 (reverse)

seq1  TTAAGC--TGGGCATGGTGGCGCACGCCTTTAATCCAAGTACTC-AAGAG  47
      ||||||  | ||||| |||||||||||   ||||||||||| ||  ||||
seq2  TTAAGCCTTAGGCATTGTGGCGCACGC---TAATCCAAGTATTCTCAGAG  47

seq1  GCAGAGGCAGGAGGATTTCTGTTAATTAGAGGCCAGCCTGGTCTACAGA-  96
       |||||||| || |||||||||| | |||||   ||||||||||||||| 
seq2  CCAGAGGCA-GAAGATTTCTGTT-AGTAGAG--TAGCCTGGTCTACAGAG  93

seq1  GTGAGTTCCAGGAC-AGCCAGAGCTACACACAGAGAAACCCAACCCAGTC  145
      ||||| | |||||| |||||||||||||||||||| || || ||||||||
seq2  GTGAG-TGCAGGACAAGCCAGAGCTACACACAGAGGAAACC-ACCCAGTC  141

seq1  TCAAAAAACAAAACAAAACAAAAAAACCAAAACAAAATTAAAAAGCTGCC  195
      || ||||||||||| ||||||||||  | |||||||  | ||||||||||
seq2  TC-AAAAACAAAAC-AAACAAAAAA--CCAAACAAA--TTAAAAGCTGCC  185

seq1  TTGGTTACCTTTCTCCCCATCTCCACTGTAGAAGAGGGACGAGCTGGGGA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTACCTTTCTCCCCATCTCCACTGTAGAAGAGGGACGAGCTGGGGA  235

seq1  AGATGGTGCGGCCTTTCAGACTGAGTCTGCTTGGATGGTTAAAG-TTTGC  294
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGATGGTGCGGCCTTTCAGACTGAGTCTGCTTGGATGGTTAAAGTTTTGC  285

seq1  GTGCAGAGTAAAGCTGGACTCTGCCCAGAGTTTTTAAGATGAAGAAGATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGAGTAAAGCTGGACTCTGCCCAGAGTTTTTAAGATGAAGAAGATA  335

seq1  GCAAAAGGAAGATGTGGATATGAAATTTTTATCTTGCTGTTAGTTGCCCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGGAAGATGTGGATATGAAATTTTTATCTTGCTGTTAGTTGCCCT  385

seq1  GCAGACCCCAAGAAGGGATTGGTGCCATTTCTAAGTCTTTAATTCCCCCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCCCAAGAAGGGATTGGTGCCATTTCTAAGTCTTTAATTCCCCCT  435

seq1  TCTGTTTGAGCAGTTTTCCACCTCAGGAAAGTGGGTGTCGGCCGTCTGGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTGAGCAGTTTTCCACCTCAGGAAAGTGGGTGTCGGCCGTCTGGC  485

seq1  CGTGTGTTAGAGCAGTGAGTGAGAAGGTAGCAGGTCCTAGTGCTTGAGAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTTAGAGCAGTGAGTGAGAAGGTAGCAGGTCCTAGTGCTTGAGAC  535

seq1  AGGCAAGGGAAACGGGGCCAGCTGAAACCTGAGAGCAGCGTGCATGCCGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGGAAACGGGGCCAGCTGAAACCTGAGAGCAGCGTGCATGCCGT  585

seq1  CGGAGGCCCACGGCAGCAGCATGCAGTTAAACACTGCGGCGTTTCTGACC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCCCACGGCAGCAGCATGCAGTTAAACACTGCGGCGTTTCTGACC  635

seq1  TTCTGACATCGCAGTGTGACACCGTCACAGTCTTGACAAATGTGTGATCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACATCGCAGTGTGACACCGTCACAGTCTTGACAAATGTGTGATCA  685

seq1  ACAGTTTTGTGCTGGTTTCTCAGCTGTATGTGGCCCCTGGGCCACAGGTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTGTGCTGGTTTCTCAGCTGTATGTGGCCCCTGGGCCACAGGTT  735

seq1  GGGCACATCTCAGAGGTCTTGTCCAAGGTACCTGGTGAAAGAAAGGGCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACATCTCAGAGGTCTTGTCCAAGGTACCTGGTGAAAGAAAGGGCTT  785

seq1  TGCTCTCAGCTCTTCCCTATCCCTTCTGGCTTCCATTACCTTTGCAAGAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCAGCTCTTCCCTATCCCTTCTGGCTTCCATTACCTTTGCAAGAG  835

seq1  ATCCACTTTGTACCACAGGCTATCCTTGAACTTGCTGCATGGCCTGCCTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTTTGTACCACAGGCTATCCTTGAACTTGCTGCATGGCCTGCCTG  885

seq1  GGATGAGTTGAACCTAAGTCCATTCTCTTTCAGCCTCTCAAGTGCCCTGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGTTGAACCTAAGTCCATTCTCTTTCAGCCTCTCAAGTGCCCTGG  935

seq1  TATCTTCTGATAGTCAATATTTCCGGAAATGATGCAAATGGTGATGCCAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTGATAGTCAATATTTCCGGAAATGATGCAAATGGTGATGCCAT  985

seq1  TGGATGTAGGCAGAGGTTTTTGATAGTAGCAGTTTACTTGAATGGGTGGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTAGGCAGAGGTTTTTGATAGTAGCAGTTTACTTGAATGGGTGGG  1035

seq1  TCTCAGCAAGCTCCTGTGAGGGACTCTAGAGCTCTAGCCATCATAAATGT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCAAGCTCCTGTGAGGGACTCTAGAGCTCTAGCCATCATAAATGT  1085

seq1  GCAGTATTTACCAAATCCCAGCAGTGCGTGTGATCTGACTTTTTCATAGA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATTTACCAAATCCCAGCAGTGCGTGTGATCTGACTTTTTCATAGA  1135

seq1  GAATTC  1150
      ||||||
seq2  GAATTC  1141