BAC Information

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BAC

Clone NameB6Ng01-302C15
Chromosome18 (Build37)
Map Location 87,171,613 - 87,172,684
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545270, LOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719
Downstream geneLOC383318, Ppia-ps18_1039.1, LOC329008
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302C15.bB6Ng01-302C15.g
ACCGA096288GA096289
length1,0711,184
definitionB6Ng01-302C15.b B6Ng01-302C15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatagtgagtcatcattttcaatagaaaagttttatccttaatc
attccttatgggaagaaggggataggcatggaaatgagataagggagaag
ctggactgttctataaatctccttatcctccccaaatggcagggactagg
gaaatagttatctatctaaagggtggaaattggtctatctgtggatgata
cagaaagatcttgcaatggacataggtggaaaatttagtgaacaccttga
ctgctgtggttttcatttctttctaaaacattgttatttctagttatcat
ggtttgattttctttgtagattgacataccgtctacatgttggtgtcctt
aactattttcatctataatctttgatttgtttatggtgtatttttgtagt
aacttaaatatcatcagccacatttgacatagtatgagtttaatgtgtac
acacttactcttctccaggaggagtcaacttctgtgtttaaaaaaagaac
tttaaaaaccgcagcattcactgtttttatgttctggcaatatacataat
tcttctccctgacactttatttactatagcattttatatgataaaaataa
ttagaaaagcatggtttccatttaaaggtgttggtttgtatttaccatga
gacttccagggtgtattcattggtgttcgtgcactgagacatttcctgga
attatattccttcatggcaaagcaaacctttatgagttccttcgatgaaa
atagaatcgtgttaaaccctctcagtttttctttcttcaggaatgtcttt
atttcatcttaactttataaagataatttctctagctgagcagttctagg
ccaaacagttgtttatatcctgaaccctgatagaattattgctttgcctc
ttggctttcactgttactgctgagaagtaagccactgttttgatgatatt
tgttttctatgaaattctcctttatgtcacatctcataatttagcacagt
gtacctgtatgtattttatttctctttaatttttttttatattttgaaat
ataaatagtgttgcaatcatt
gaattctcacctgaggaatacggaatggcagagaagcatctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgaaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaagtggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaaagtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcatacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttattagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatcccaaacgctgacaccattgcatacactagcaagattttattgaaa
tgacccagatgtagctgtctcttgtgagactaatgcccggggccctagca
aacacagaagtggatgctcactagtcagctaattggatggatcataaggg
ctccttcaatggaggagcctagagaaggtagcccaaggaagctaaaggga
tcctgcaacccctataggtggacacaattatgactaaccagtaccccgag
cttcttgacttcttagctgcatatatattcaaaaggattgccctagtcgt
catcactgggaaagagaaggccatgaacttgcaacctttattatgcccag
tacaggaggaacaccctagtggcgtcctcatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87171613_87172684
seq2: B6Ng01-302C15.b_45_1115

seq1  GAATTCAATAGTGAGTCATCATTTTCAATAGAAAAGTTTTATCCTTAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGTGAGTCATCATTTTCAATAGAAAAGTTTTATCCTTAATC  50

seq1  ATTCCTTATGGGAAGAAGGGGATAGGCATGGAAATGAGATAAGGGAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTATGGGAAGAAGGGGATAGGCATGGAAATGAGATAAGGGAGAAG  100

seq1  CTGGACTGTTCTATAAATCTCCTTATCCTCCCCAAATGGCAGGGACTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTGTTCTATAAATCTCCTTATCCTCCCCAAATGGCAGGGACTAGG  150

seq1  GAAATAGTTATCTATCTAAAGGGTGGAAATTGGTCTATCTGTGGATGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGTTATCTATCTAAAGGGTGGAAATTGGTCTATCTGTGGATGATA  200

seq1  CAGAAAGATCTTGCAATGGACATAGGTGGAAAATTTAGTGAACACCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGATCTTGCAATGGACATAGGTGGAAAATTTAGTGAACACCTTGA  250

seq1  CTGCTGTGGTTTTCATTTCTTTCTAAAACATTGTTATTTCTAGTTATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGGTTTTCATTTCTTTCTAAAACATTGTTATTTCTAGTTATCAT  300

seq1  GGTTTGATTTTCTTTGTAGATTGACATACCGTCTACATGTTGGTGTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGATTTTCTTTGTAGATTGACATACCGTCTACATGTTGGTGTCCTT  350

seq1  AACTATTTTCATCTATAATCTTTGATTTGTTTATGGTGTATTTTTGTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTTCATCTATAATCTTTGATTTGTTTATGGTGTATTTTTGTAGT  400

seq1  AACTTAAATATCATCAGCCACATTTGACATAGTATGAGTTTAATGTGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATATCATCAGCCACATTTGACATAGTATGAGTTTAATGTGTAC  450

seq1  ACACTTACTCTTCTCCAGGAGGAGTCAACTTCTGTGTTTAAAAAAAGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTACTCTTCTCCAGGAGGAGTCAACTTCTGTGTTTAAAAAAAGAAC  500

seq1  TTTAAAAACCGCAGCATTCACTGTTTTTATGTTCTGGCAATATACATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAACCGCAGCATTCACTGTTTTTATGTTCTGGCAATATACATAAT  550

seq1  TCTTCTCCCTGACACTTTATTTACTATAGCATTTTATATGATAAAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCCTGACACTTTATTTACTATAGCATTTTATATGATAAAAATAA  600

seq1  TTAGAAAAGCATGGTTTCCATTTAAAGGTGTTGGTTTGTATTTACCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAGCATGGTTTCCATTTAAAGGTGTTGGTTTGTATTTACCATGA  650

seq1  GACTTCCAGGGTGTATTCATTGGTGTTCGTGCACTGAGACATTTCCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCAGGGTGTATTCATTGGTGTTCGTGCACTGAGACATTTCCTGGA  700

seq1  ATTATATTCCTTCATGGCAAAGCAAACCTTTATGAGTTCCTTCGATGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTCCTTCATGGCAAAGCAAACCTTTATGAGTTCCTTCGATGAAA  750

seq1  ATAGAATCGTGTTAAACCCTCTCAGTTTTTCTTTCTTCAGGAATGTCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATCGTGTTAAACCCTCTCAGTTTTTCTTTCTTCAGGAATGTCTTT  800

seq1  ATTTCATCTTAACTTTATAAAGATAATTTCTCTAGCTGAGCAGTTCTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATCTTAACTTTATAAAGATAATTTCTCTAGCTGAGCAGTTCTAGG  850

seq1  CCAAACAGTTGTTTATATCCTGAACCCTGATAGAATTATTGCTTTGCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAGTTGTTTATATCCTGAACCCTGATAGAATTATTGCTTTGCCTC  900

seq1  TTGGCTTTCACTGTTACTGCTGAGAAGTAAGCCACTGTTTTGATGATATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTTCACTGTTACTGCTGAGAAGTAAGCCACTGTTTTGATGATATT  950

seq1  TGTTTTCTATGAAATTCTCCTTTATGTCAACATCTCATAATTTTAGCACA  1000
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  TGTTTTCTATGAAATTCTCCTTTATGTC-ACATCTCATAA-TTTAGCACA  998

seq1  GTGTACCTGTATGTAATTTTATTTCTCTTTAA-TTTTTTTTATATTTTGA  1049
      |||||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  GTGTACCTGTATGT-ATTTTATTTCTCTTTAATTTTTTTTTATATTTTGA  1047

seq1  AATTATAATAGTGTTGC-ATCATT  1072
      |||   ||||||||||| ||||||
seq2  AATATAAATAGTGTTGCAATCATT  1071