BAC Information

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BAC

Clone NameB6Ng01-302L08
Chromosome18 (Build37)
Map Location 87,041,620 - 87,042,708
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545270, LOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437
Downstream geneLOC435580, LOC546719, LOC383318, Ppia-ps18_1039.1, LOC329008
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302L08.bB6Ng01-302L08.g
ACCGA096690GA096691
length1,0881,160
definitionB6Ng01-302L08.b B6Ng01-302L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccactgctccatattcttacaagtgatttcgattgttatttcat
gtgtaccactgaaaaaatggcatatgatcatatgcataattatagtcaat
atatgtcttaatttaggtccactccaaatctttcagatttattcacttca
ttagtcacagtccatgcatcttacttctggccatctctcttctgaagcaa
ggaaaacactgcccttctaaaagctttccctacatatcccagaaaatcta
gaagggctttctgattacacatccaggccatttcaatatgaggcttccca
atctgtgtggtgcttgcttattgtgcacaaccacctgtaatacatgccca
gaatgtgacttgctcagttattttattaaaggagatttcatttgatgctc
tatgtagtaatgtgaaagataatacagtttatcagaaaaagtcagggagc
ctttgggtcacttcgtgtacaacttttcttaagatatgatttcctcactt
ttgtaatatcacttttatttagtgttgcagttcatttcaatatcagtaaa
cgagcaagtctttcaagacaggtggcaccgggcacatggcaagttagtgt
taccactttccttgagttctaacagcaggcagagaatgcttctctaaagg
ataaagtatttccagatgtttcatccaatgcgttcaaaattctcagtgta
tggcctatgattcacgtagagctccaaagaagcttttcaattgcacccct
aatgaataatgacattttattgcacccttaaaccttcaagacatataact
aaaagtagagctgattgcaaggcaacttgaacttatttgtagaatgctct
tattctgagcactttccagaattagaaaggtttcaagacatctggtttag
agtactaatcccagtgaattatatgtcatcttgaagaatttgatgctttg
ggagtttcatatcttacagaaactgcagacaaagatgaagacccagggta
aagaccatataactccatgtcagccacagaataatcaggacattccatgc
tgtaatgtctgtgctgtgggtggtagtttaaccagaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggacaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaatctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataacc
agcatccaaacgctgaaaccattgcatacactagcaagattttatcgaaa
gggacccagatgtagctgtctcttgtgagactatgcccggggccctagca
aacacagaagtggatgctcacagtcacttaatggatggatcacagggctc
ccaatgtaggagctagagaaagtacccaaggagctaaagggatctgcaac
cctatagtggaacacattatgactaccagtaccccggagctctgactcta
gctgcatatgtatcaaaaggatgctagtccgcattcacttgcaaagaaag
tcaatggacaggcaaacttttattattgctcccaggtatacacaaggaga
taaacggttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87041620_87042708
seq2: B6Ng01-302L08.b_46_1133

seq1  GAATTCCCACTGCTCCATATTCTTACAAGTGATTTCGATTGTTATTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTGCTCCATATTCTTACAAGTGATTTCGATTGTTATTTCAT  50

seq1  GTGTACCACTGAAAAAATGGCATATGATCATATGCATAATTATAGTCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCACTGAAAAAATGGCATATGATCATATGCATAATTATAGTCAAT  100

seq1  ATATGTCTTAATTTAGGTCCACTCCAAATCTTTCAGATTTATTCACTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCTTAATTTAGGTCCACTCCAAATCTTTCAGATTTATTCACTTCA  150

seq1  TTAGTCACAGTCCATGCATCTTACTTCTGGCCATCTCTCTTCTGAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCACAGTCCATGCATCTTACTTCTGGCCATCTCTCTTCTGAAGCAA  200

seq1  GGAAAACACTGCCCTTCTAAAAGCTTTCCCTACATATCCCAGAAAATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACACTGCCCTTCTAAAAGCTTTCCCTACATATCCCAGAAAATCTA  250

seq1  GAAGGGCTTTCTGATTACACATCCAGGCCATTTCAATATGAGGCTTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCTTTCTGATTACACATCCAGGCCATTTCAATATGAGGCTTCCCA  300

seq1  ATCTGTGTGGTGCTTGCTTATTGTGCACAACCACCTGTAATACATGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTGGTGCTTGCTTATTGTGCACAACCACCTGTAATACATGCCCA  350

seq1  GAATGTGACTTGCTCAGTTATTTTATTAAAGGAGATTTCATTTGATGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGACTTGCTCAGTTATTTTATTAAAGGAGATTTCATTTGATGCTC  400

seq1  TATGTAGTAATGTGAAAGATAATACAGTTTATCAGAAAAAGTCAGGGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGTAATGTGAAAGATAATACAGTTTATCAGAAAAAGTCAGGGAGC  450

seq1  CTTTGGGTCACTTCGTGTACAACTTTTCTTAAGATATGATTTCCTCACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGTCACTTCGTGTACAACTTTTCTTAAGATATGATTTCCTCACTT  500

seq1  TTGTAATATCACTTTTATTTAGTGTTGCAGTTCATTTCAATATCAGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATATCACTTTTATTTAGTGTTGCAGTTCATTTCAATATCAGTAAA  550

seq1  CGAGCAAGTCTTTCAAGACAGGTGGCACCGGGCACATGGCAAGTTAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCAAGTCTTTCAAGACAGGTGGCACCGGGCACATGGCAAGTTAGTGT  600

seq1  TACCACTTTCCTTGAGTTCTAACAGCAGGCAGAGAATGCTTCTCTAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTTTCCTTGAGTTCTAACAGCAGGCAGAGAATGCTTCTCTAAAGG  650

seq1  ATAAAGTATTTCCAGATGTTTCATCCAATGCGTTCAAAATTCTCAGTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTATTTCCAGATGTTTCATCCAATGCGTTCAAAATTCTCAGTGTA  700

seq1  TGGCCTATGATTCACGTAGAGCTCCAAAGAAGCTTTTCAATTGCACCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTATGATTCACGTAGAGCTCCAAAGAAGCTTTTCAATTGCACCCCT  750

seq1  AATGAATAATGACATTTTATTGCACCCTTAAACCTTCAAGACATATAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATAATGACATTTTATTGCACCCTTAAACCTTCAAGACATATAACT  800

seq1  AAAAGTAGAGCTGATTGCAAGGCAACTTGAACTTATTTGTAGAATGCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGAGCTGATTGCAAGGCAACTTGAACTTATTTGTAGAATGCTCT  850

seq1  TATTCTGAGCACTTTCCAGAATTAG-AAGGTTTCAAGACATCTGGTTTAG  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATTCTGAGCACTTTCCAGAATTAGAAAGGTTTCAAGACATCTGGTTTAG  900

seq1  AGTACTAATCCCAGTGAATTATATGTCATCTTGAAGAA-TTGATGCTTTG  948
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGTACTAATCCCAGTGAATTATATGTCATCTTGAAGAATTTGATGCTTTG  950

seq1  GGAGTTTCATATCTTACAGAAACTGCAGACAAAGATGAAGACCCAGGGTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCATATCTTACAGAAACTGCAGACAAAGATGAAGACCCAGGGTA  1000

seq1  AAGACCATATTAACTCCATGTCAGGCCACAG-ATAATCAGGACATTCCAT  1047
      ||||||||| ||||||||||||| ||||||| ||||||||||||||||| 
seq2  AAGACCATA-TAACTCCATGTCA-GCCACAGAATAATCAGGACATTCCA-  1047

seq1  TGCTGTATTGTTCTGTGCTGTGGGTGGTAGTTAACCCAGAAA  1089
      ||||||| || ||||||||||||||||||||| | |||||||
seq2  TGCTGTAATG-TCTGTGCTGTGGGTGGTAGTTTAACCAGAAA  1088