BAC Information

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BAC

Clone NameB6Ng01-305P04
Chromosome18 (Build37)
Map Location 48,800,859 - 48,802,045
singlet/doubletsinglet
Overlap genenone
Upstream geneA730092B10, LOC383325, LOC100042982, LOC100042284, LOC100042301, EG433182, LOC383326, LOC100042323, LOC545470
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305P04.bB6Ng01-305P04.g
ACCGA099110GA099111
length1,2031,170
definitionB6Ng01-305P04.b B6Ng01-305P04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacaagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttgttggattcagttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgcaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataattgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattatctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctctttggtgaatttgcttccttttttttctagg
gcttttagatgtgttgtcaagctgctagtatgtgctctcttctgtttctt
cttggaaggcactcagaggtatgagtttccctcttagaaatgcttcattg
tgtccaataggtttggtacgttgtgctcatttcattaagtctaaaagtct
ttaaattctttctttatccttcgttgacaaggtatcattggagaagagag
ttttgttccagtccacgtgatgttgctcatacttataggttgtaatgaaa
tcagtcttaaggcctagtgtcggataaggatacatggaacaatttccaat
agt

gaattccttcctagcctgtggagtcattgaaatgtgcttccctgaaagta
actatcccttagggtttattattcttatttttaatataataatgagaaag
aggaggttaggaaaacagtaaaacttctcctgaaatgagactgttacatc
tgatcaaatgattcaacaactcttacacaattctatcaagatggggaaat
tgttactgtaaaatatattttgtttcaatcacgttttagttttatcttca
aaacatctcaagggtcataatttgcatcttaaatttaccaggatgttttc
agtgcgcacagttagttgatactagtagcctgtgtactctattgcttatc
taaaatttatttacattttattttatgtattgttagtgctttgccttcat
gtatgtaaatgcatcagctccattacctataacccatatggtattatagg
acacaagagggtgtttagtgtcttggaattagagttataggttgctggga
gtttccttggggatactgggaactgatcctggaatctctgaaagaataga
aagttctcgtaaccaatgaatcatttttcctgtcccaaactctcagattt
ttagtactccagaagaataaaacctaaatattctgaagttccatgtcaca
gagtaattgtaaattgtatttaggcagtattagcccagagacctatctga
aacatgcagcagtagaaatggcattctgattgtgagatcatgaacttttg
tttctcttcaagtatggatgcgatgcatgttcagaacaaaagcctttggg
gtttttactaaatttagggtttaagaggtttatcttttctctctctcttt
ttttaaattttatttgataacctgaatgataaatactgttgcaaagtcac
agaagtaattgaaataagggtgttagaaaagtgatcactttcgcacaaat
gttttgttttgcaccctgaaataatgacctttctgagactttggtaatat
ttcatcaatgctatttcatgtgttttatgggatggtggacaatgaccggc
gatgttgagatttatggaaaccatagtcatgtcatacaggtactcttttt
tgaatactagcaattactattagccttagtcagttaactagcttgacttg
gtcaaaggtcccaggtgtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_48800859_48802045
seq2: B6Ng01-305P04.g_67_1236 (reverse)

seq1  GGACAC--TGGACTTTTGACAAAAGTCAAAAGCTAAGTTTAACCTGACT-  47
      ||||||   |||| ||||||  |||||  ||||| ||||  | |||||| 
seq2  GGACACCTGGGACCTTTGAC-CAAGTC--AAGCT-AGTT--AACTGACTA  44

seq1  AGGCTAATAGTAAATGCTAGTTATCTAAAAAAGAGTAACCTTGGTAATGA  97
      ||||||||||||| |||||| |||  |||||||||| ||||  || ||||
seq2  AGGCTAATAGTAATTGCTAG-TATTCAAAAAAGAGT-ACCT--GT-ATGA  89

seq1  CATGACCTATGGTTTCATAAAATCTTCAAACATCGCCGGTCATTTGTCCA  147
      ||||| ||||||||||   ||||||   |||||||||||||| |||||||
seq2  CATGA-CTATGGTTTCCATAAATCT--CAACATCGCCGGTCA-TTGTCCA  135

seq1  CATTCCCATAAAACACAATGAAATAGCATTGATGAAATATTTACCAAAGT  197
      |  ||||||||||||| |||||||||||||||||||||| ||||||||||
seq2  CCATCCCATAAAACAC-ATGAAATAGCATTGATGAAATA-TTACCAAAGT  183

seq1  TCTTCAGAAAGGTCATTATTTTCAGGGTGCAAAACAAAACATTTGTGCGA  247
         ||||||||||||||| |||||||||||||||||||||||||||||||
seq2  --CTCAGAAAGGTCATTA-TTTCAGGGTGCAAAACAAAACATTTGTGCGA  230

seq1  AAGTGATCACTTTTCTAACACCCTTATTTCAATTACTTCTGTGACTTTGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATCACTTTTCTAACACCCTTATTTCAATTACTTCTGTGACTTTGC  280

seq1  AACAGTATTTATCATTCAGGTTATCAAATAAAATTTAAAAAAAGAGAGAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATTTATCATTCAGGTTATCAAATAAAATTTAAAAAAAGAGAGAG  330

seq1  AGAAAAGATAAACCTCTTAAACCCTAAATTTAGTAAAAACCCCAAAGGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGATAAACCTCTTAAACCCTAAATTTAGTAAAAACCCCAAAGGCT  380

seq1  TTTGTTCTGAACATGCATCGCATCCATACTTGAAGAGAAACAAAAGTTCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTGAACATGCATCGCATCCATACTTGAAGAGAAACAAAAGTTCA  430

seq1  TGATCTCACAATCAGAATGCCATTTCTACTGCTGCATGTTTCAGATAGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCACAATCAGAATGCCATTTCTACTGCTGCATGTTTCAGATAGGT  480

seq1  CTCTGGGCTAATACTGCCTAAATACAATTTACAATTACTCTGTGACATGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCTAATACTGCCTAAATACAATTTACAATTACTCTGTGACATGG  530

seq1  AACTTCAGAATATTTAGGTTTTATTCTTCTGGAGTACTAAAAATCTGAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGAATATTTAGGTTTTATTCTTCTGGAGTACTAAAAATCTGAGA  580

seq1  GTTTGGGACAGGAAAAATGATTCATTGGTTACGAGAACTTTCTATTCTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGACAGGAAAAATGATTCATTGGTTACGAGAACTTTCTATTCTTT  630

seq1  CAGAGATTCCAGGATCAGTTCCCAGTATCCCCAAGGAAACTCCCAGCAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATTCCAGGATCAGTTCCCAGTATCCCCAAGGAAACTCCCAGCAAC  680

seq1  CTATAACTCTAATTCCAAGACACTAAACACCCTCTTGTGTCCTATAATAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACTCTAATTCCAAGACACTAAACACCCTCTTGTGTCCTATAATAC  730

seq1  CATATGGGTTATAGGTAATGGAGCTGATGCATTTACATACATGAAGGCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGGTTATAGGTAATGGAGCTGATGCATTTACATACATGAAGGCAA  780

seq1  AGCACTAACAATACATAAAATAAAATGTAAATAAATTTTAGATAAGCAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTAACAATACATAAAATAAAATGTAAATAAATTTTAGATAAGCAAT  830

seq1  AGAGTACACAGGCTACTAGTATCAACTAACTGTGCGCACTGAAAACATCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACACAGGCTACTAGTATCAACTAACTGTGCGCACTGAAAACATCC  880

seq1  TGGTAAATTTAAGATGCAAATTATGACCCTTGAGATGTTTTGAAGATAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATTTAAGATGCAAATTATGACCCTTGAGATGTTTTGAAGATAAA  930

seq1  ACTAAAACGTGATTGAAACAAAATATATTTTACAGTAACAATTTCCCCAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACGTGATTGAAACAAAATATATTTTACAGTAACAATTTCCCCAT  980

seq1  CTTGATAGAATTGTGTAAGAGTTGTTGAATCATTTGATCAGATGTAACAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATAGAATTGTGTAAGAGTTGTTGAATCATTTGATCAGATGTAACAG  1030

seq1  TCTCATTTCAGGAGAAGTTTTACTGTTTTCCTAACCTCCTCTTTCTCATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTCAGGAGAAGTTTTACTGTTTTCCTAACCTCCTCTTTCTCATT  1080

seq1  ATTATATTAAAAATAAGAATAATAAACCCTAAGGGATAGTTACTTTCAGG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTAAAAATAAGAATAATAAACCCTAAGGGATAGTTACTTTCAGG  1130

seq1  GAAGCACATTTCAATGACTCCACAGGCTAGGAAGGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACATTTCAATGACTCCACAGGCTAGGAAGGAATTC  1170


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