BAC Information

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BAC

Clone NameB6Ng01-306G21
Chromosome18 (Build37)
Map Location 70,789,021 - 70,790,159
singlet/doubletsinglet
Overlap genenone
Upstream geneTcf4, Ccdc68, Rab27b, 2310002L13Rik, 4930503L19Rik, Stard6, Poli, Mbd2
Downstream geneEG668032, Dcc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306G21.bB6Ng01-306G21.g
ACCGA099470GA099471
length1,1421,126
definitionB6Ng01-306G21.b B6Ng01-306G21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacagaagtgaaagaaatggcctcagaaagacactcgttcccaa
aagtgtgcgtgttactggaagatgttggctggcagccaccttaactccag
agacaagagggtgctcttgtgggagcagtggccttaaattgctttaatgt
cctttcagaaagaaaagcctggagcccaaacttaggtttatttgcaactt
gtatttgtaaacatgtgcaaatatgttcacagtgaaacatttaaatatag
aaaaatcccaaaatgttgagacagaaataaatgtgggatcagatattcct
actctcaatgccctgcagacatacccaactttaaatatctttcactggtg
tggatagtcacaaaacctgaaagtaaatgcatgagaaatatagcctaagc
cgtacataaaaatgaccctatactctgtgacagaagaactatgcttaggt
aagaaatcatccttataaaagatgatttctctaggagcatcatctgtcaa
aacttcagcacagcccttctgcctggcattagctgtcaggtccgggtacc
ctgtccccctgccactgtgtgagtttctgtcccagagagctgaaggcctg
agtggggccattgcagagggagaacggttctggaaacagaccactgcgtt
caaatttactctctgcctcttgttaatgtccataaagcatgtgtgtgcct
gggtcttggattccttaactcttgaatgagaataaaaacatgcacgtgtt
ggacagttaaaaaactcaaggatggtatcgatggtggtaaaagtgtttag
ttgtaaaatgctaagttgtaaactgtaagatgaagtaaaaattgccccta
cttatgacctcttaaaaaactaaaaggtattgttacaaagagggcatagt
ctttacaaattaacattttttttcacttgtctcagcctcttctgctaaat
gcagcttcttgccctacattgcaaggccttgccctagaagctcctctggc
acagccgacgtgatggagctgacagattattcttattagacaccttgagc
attacatgtataggggttctattatacacccatccaaataggccagagat
cggccggaccaggcctgccaggcaggtggagcagggttctcc
gaattcctgatctttccaaaacttttatcatgaatggctgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcagttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactacttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgttcatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
tagaattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
tttcctgccatctactcctcttgggtgaatttgcttcctttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctctctcccgttcttc
ttggaagcactcagagctatgaggtttccctctaagaaatgcttttcatt
gtgttcccataggttgggtacgttgtgggctttcaatttcattaactcta
aaagtctttaatttcttcttattccttcttgaaccaaaggtaacatttga
cagagaggtgtgttccagtttccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_70789021_70790159
seq2: B6Ng01-306G21.b_45_1186 (reverse)

seq1  GGAGACCCCTGCCTCCCACCTGCCT-GCAGGGCTGTCCCGCCCG--CTCT  47
      ||||| ||||||   |||||||||| ||||| |||  ||| |||  ||||
seq2  GGAGAACCCTGC--TCCACCTGCCTGGCAGGCCTGGTCCGGCCGATCTCT  48

seq1  CGCCT-CTGGGATGGGTGTAT-ATAGGACCCCTATACATGGTATGCTTCA  95
       ||||  | |||||||||||| |||| |||||||||||||  |||||  |
seq2  GGCCTATTTGGATGGGTGTATAATAGAACCCCTATACATGTAATGCTCAA  98

seq1  GGTGTCTA--TAGAAT-ATCTGTCAGCTCCATCACGTCGGGCTGTGCCAG  142
      ||||||||   ||||| ||||||||||||||||||||| |||||||||| 
seq2  GGTGTCTAATAAGAATAATCTGTCAGCTCCATCACGTC-GGCTGTGCCA-  146

seq1  GAGGAGCTTCTAGGGCAAGGCCTTGCAATGTAGGGCAAGAAGCTGCATTT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCTTCTAGGGCAAGGCCTTGCAATGTAGGGCAAGAAGCTGCATTT  196

seq1  AGCAG-AGAGGCTGAGACAAGTGAAAAAAAATGTTAATTTGTAAAGACTA  241
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGAGGCTGAGACAAGTGAAAAAAAATGTTAATTTGTAAAGACTA  246

seq1  TGCCCTCTTTTGTAACAATTACCTTTTAGTTTTTTAAGAGGTCATAAGTA  291
      ||||||| |||||||||| |||||||||||||||||||||||||||||||
seq2  TGCCCTC-TTTGTAACAA-TACCTTTTAGTTTTTTAAGAGGTCATAAGTA  294

seq1  GGGGCAATTTTTACTTCATCTTACAGTTTACAACTTAGCATTTTACAACT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAATTTTTACTTCATCTTACAGTTTACAACTTAGCATTTTACAACT  344

seq1  AAACACTTTTACCACCATCGATACCATCCTTGAGTTTTTTAACTGTCCAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTTTACCACCATCGATACCATCCTTGAGTTTTTTAACTGTCCAA  394

seq1  CACGTGCATGTTTTTATTCTCATTCAAGAGTTAAGGAATCCAAGACCCAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGCATGTTTTTATTCTCATTCAAGAGTTAAGGAATCCAAGACCCAG  444

seq1  GCACACACATGCTTTATGGACATTAACAAGAGGCAGAGAGTAAATTTGAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACATGCTTTATGGACATTAACAAGAGGCAGAGAGTAAATTTGAA  494

seq1  CGCAGTGGTCTGTTTCCAGAACCGTTCTCCCTCTGCAATGGCCCCACTCA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGTGGTCTGTTTCCAGAACCGTTCTCCCTCTGCAATGGCCCCACTCA  544

seq1  GGCCTTCAGCTCTCTGGGACAGAAACTCACACAGTGGCAGGGGGACAGGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCAGCTCTCTGGGACAGAAACTCACACAGTGGCAGGGGGACAGGG  594

seq1  TACCCGGACCTGACAGCTAATGCCAGGCAGAAGGGCTGTGCTGAAGTTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGGACCTGACAGCTAATGCCAGGCAGAAGGGCTGTGCTGAAGTTTT  644

seq1  GACAGATGATGCTCCTAGAGAAATCATCTTTTATAAGGATGATTTCTTAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGATGCTCCTAGAGAAATCATCTTTTATAAGGATGATTTCTTAC  694

seq1  CTAAGCATAGTTCTTCTGTCACAGAGTATAGGGTCATTTTTATGTACGGC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCATAGTTCTTCTGTCACAGAGTATAGGGTCATTTTTATGTACGGC  744

seq1  TTAGGCTATATTTCTCATGCATTTACTTTCAGGTTTTGTGACTATCCACA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTATATTTCTCATGCATTTACTTTCAGGTTTTGTGACTATCCACA  794

seq1  CCAGTGAAAGATATTTAAAGTTGGGTATGTCTGCAGGGCATTGAGAGTAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAAAGATATTTAAAGTTGGGTATGTCTGCAGGGCATTGAGAGTAG  844

seq1  GAATATCTGATCCCACATTTATTTCTGTCTCAACATTTTGGGATTTTTCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCTGATCCCACATTTATTTCTGTCTCAACATTTTGGGATTTTTCT  894

seq1  ATATTTAAATGTTTCACTGTGAACATATTTGCACATGTTTACAAATACAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAATGTTTCACTGTGAACATATTTGCACATGTTTACAAATACAA  944

seq1  GTTGCAAATAAACCTAAGTTTGGGCTCCAGGCTTTTCTTTCTGAAAGGAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAATAAACCTAAGTTTGGGCTCCAGGCTTTTCTTTCTGAAAGGAC  994

seq1  ATTAAAGCAATTTAAGGCCACTGCTCCCACAAGAGCACCCTCTTGTCTCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGCAATTTAAGGCCACTGCTCCCACAAGAGCACCCTCTTGTCTCT  1044

seq1  GGAGTTAAGGTGGCTGCCAGCCAACATCTTCCAGTAACACGCACACTTTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTAAGGTGGCTGCCAGCCAACATCTTCCAGTAACACGCACACTTTT  1094

seq1  GGGAACGAGTGTCTTTCTGAGGCCATTTCTTTCACTTCTGTGGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACGAGTGTCTTTCTGAGGCCATTTCTTTCACTTCTGTGGAATTC  1142