BAC Information

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BAC

Clone NameB6Ng01-306N07
Chromosome18 (Build37)
Map Location 87,007,945 - 87,009,058
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545269, LOC545270, LOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437
Downstream geneLOC435580, LOC546719, LOC383318, Ppia-ps18_1039.1, LOC329008
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306N07.bB6Ng01-306N07.g
ACCGA099762GA099763
length1,1901,103
definitionB6Ng01-306N07.b B6Ng01-306N07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggacaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaatctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataacc
agcatccaaacgctgaaaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggccctagcaa
acacagaagtggatgctcacagtcacttaatggatggatcacagggctcc
caatgtagagctagagaaagtacccaaggagctaaggatctgcacctata
gtggacacattatgaactacagtacccggagctctgactctagctgcata
tgtatcaaagatgggctagtcgcattcacttgaaaggaagtcaatgaaca
ggccaaactttatatggccccagttacaggataatcgctaggtcaatatg
gaattgggttgcttagcgactgataggactgctacttcat
gaattcatggaatccaaatgctatctgaagagctaaagacagttaatggc
tgttaggggagtgagtcattttttccaagggtttggacccaggtatgtta
ccccctgtacccacaccatatagagagggcagcactctttgaacacaaaa
gattattaaacaacatagcaggaagttgggggtctgtagggagcatggga
aaagttatagtggataatgagagattgtattcaattacattgtagacact
tctgaaattcaaataaagttttgaattagaaaataataaaaaacatacag
tcttgctatattttagatttttttccttaaagatcaatagtcatatcatt
tatgttcaaaaaagaagttaatctcagctatatattttaacagaaactat
tcatataaattatgtacatataatgttcataaagaaaattacttagatac
ttaaattttgataactattaaatcagatacaagtcatgaaatggacattt
ccatcctgttgcttttcaaaagagaagactttccatagaaatgctgagac
attgttgtggggctatattcaatactatcaatccataaatacttgtgaaa
attattttccagcacttgcaaagctgccatttggcatttaattacagcca
gtttattaaattccacaggcttacaacttgaaggtgtgcttgatattaaa
ataggtcccatttctatttcatacagactccagacaattcccagatgtct
ctgaaactactatcactgctccccttcccacaggctgtcatgtgcatagg
tctcacctttttcctgatttcctacatcctcgttactcctgtaacctctc
cagagaggatagaaagattgctgcagagtggctgtcatatggcaaagcaa
tttcatccacctctgcattcggccatactctcagcacatccacagtgaat
tgttctgtttctctcatcctgttaccagctttacatgggcattattagtc
aacacttccacacatataaaatgcacattggggctccctgtcatgtgatg
cacaccattgtttcttgctaagaaccagtgtctgccatatctttgtaaca
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87007945_87009058
seq2: B6Ng01-306N07.g_69_1171

seq1  GAATTCATGGAATCCAAATGCTATCTGAAGAGCTAAAGACAGTTAATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGAATCCAAATGCTATCTGAAGAGCTAAAGACAGTTAATGGC  50

seq1  TGTTAGGGGAGTGAGTCATTTTTTCCAAGGGTTTGGACCCAGGTATGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGGGAGTGAGTCATTTTTTCCAAGGGTTTGGACCCAGGTATGTTA  100

seq1  CCCCCTGTACCCACACCATATAGAGAGGGCAGCACTCTTTGAACACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTGTACCCACACCATATAGAGAGGGCAGCACTCTTTGAACACAAAA  150

seq1  GATTATTAAACAACATAGCAGGAAGTTGGGGGTCTGTAGGGAGCATGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTAAACAACATAGCAGGAAGTTGGGGGTCTGTAGGGAGCATGGGA  200

seq1  AAAGTTATAGTGGATAATGAGAGATTGTATTCAATTACATTGTAGACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATAGTGGATAATGAGAGATTGTATTCAATTACATTGTAGACACT  250

seq1  TCTGAAATTCAAATAAAGTTTTGAATTAGAAAATAATAAAAAACATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATTCAAATAAAGTTTTGAATTAGAAAATAATAAAAAACATACAG  300

seq1  TCTTGCTATATTTTAGATTTTTTTCCTTAAAGATCAATAGTCATATCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTATATTTTAGATTTTTTTCCTTAAAGATCAATAGTCATATCATT  350

seq1  TATGTTCAAAAAAGAAGTTAATCTCAGCTATATATTTTAACAGAAACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCAAAAAAGAAGTTAATCTCAGCTATATATTTTAACAGAAACTAT  400

seq1  TCATATAAATTATGTACATATAATGTTCATAAAGAAAATTACTTAGATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAAATTATGTACATATAATGTTCATAAAGAAAATTACTTAGATAC  450

seq1  TTAAATTTTGATAACTATTAAATCAGATACAAGTCATGAAATGGACATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTGATAACTATTAAATCAGATACAAGTCATGAAATGGACATTT  500

seq1  CCATCCTGTTGCTTTTCAAAAGAGAAGACTTTCCATAGAAATGCTGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTGTTGCTTTTCAAAAGAGAAGACTTTCCATAGAAATGCTGAGAC  550

seq1  ATTGTTGTGGGGCTATATTCAATACTATCAATCCATAAATACTTGTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTGGGGCTATATTCAATACTATCAATCCATAAATACTTGTGAAA  600

seq1  ATTATTTTCCAGCACTTGCAAAGCTGCCATTTGGCATTTAATTACAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTCCAGCACTTGCAAAGCTGCCATTTGGCATTTAATTACAGCCA  650

seq1  GTTTATTAAATTCCACAGGCTTACAACTTGAAGGTGTGCTTGATATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTAAATTCCACAGGCTTACAACTTGAAGGTGTGCTTGATATTAAA  700

seq1  ATAGGTCCCATTTCTATTTCATACAGACTCCAGACAATTCCCAGATGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTCCCATTTCTATTTCATACAGACTCCAGACAATTCCCAGATGTCT  750

seq1  CTGAAACTACTATCACTGCTCCCCTTCCCACAGGCTGTCATGTGCATAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTACTATCACTGCTCCCCTTCCCACAGGCTGTCATGTGCATAGG  800

seq1  TCTCACCTTTTTCCTGATTTCCTACATCCTCGTTACTCCTGTAACCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTTTTTCCTGATTTCCTACATCCTCGTTACTCCTGTAACCTCTC  850

seq1  CAGAGAGGATAGAAAGATTGCTGCAGAGTGGCTGTCATATGGCAAAGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGATAGAAAGATTGCTGCAGAGTGGCTGTCATATGGCAAAGCAA  900

seq1  TTTCATCCACCTCTGCATTCGGCCATACTCTCAGCACATCCACAGTGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCACCTCTGCATTCGGCCATACTCTCAGCACATCCACAGTGAAT  950

seq1  TGTTCTGTTTCTTCTCCATCCTGTTACCAGCTTTACATGGGCATTATTAA  1000
      ||||||||||| ||| |||||||||||||||||||||||||||||||| |
seq2  TGTTCTGTTTC-TCT-CATCCTGTTACCAGCTTTACATGGGCATTATT-A  997

seq1  GTCAACACTTTCACACATATAAAATGCACATTGGGGGTTCCCTGTCAATG  1050
      |||||||||| ||||||||||||||||||||| |||| |||||||| |||
seq2  GTCAACACTTCCACACATATAAAATGCACATT-GGGGCTCCCTGTC-ATG  1045

seq1  TGAATGCACACCAATTGTTTCTTGCTTAAAGAAACAGTGTCTTGGCATAT  1100
      || ||||||||| |||||||||||||  ||||| ||||||| || |||| 
seq2  TG-ATGCACACC-ATTGTTTCTTGCT--AAGAACCAGTGTC-TGCCATA-  1089

seq1  TCTTTGTAACATTT  1114
      ||||||||||||||
seq2  TCTTTGTAACATTT  1103