MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-307F01
Chromosome	18 (Build37)
Map Location	39,207,833 - 39,349,357
singlet/doublet	doublet
Overlap gene	Arhgap26
Upstream gene	Pcdh1, LOC100042583, 1700086O06Rik, 0610009O20Rik, Pcdh12, Rnf14, Gnpda1, LOC240219, LOC100041839, Ndfip1, Spry4, 9630014M24Rik, LOC100041865, LOC100041875, LOC100042671, LOC666809, LOC100041894, Fgf1, EG545253
Downstream gene	Nr3c1, Pabpc2, LOC100041939
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pcdh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75599 MGI:104692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042583 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 914 ESTs, 9 Proteins

name	1700086O06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73516 MGI:1920766
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	0610009O20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66839 MGI:1914089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcdh12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53601 MGI:1855700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56736 MGI:1929668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnpda1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26384 MGI:1347054
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC240219 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:240219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 12 Proteins

name	LOC100041839 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041839
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ndfip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65113 MGI:1929601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spry4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24066 MGI:1345144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630014M24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381155 MGI:3588234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC100041865 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041875 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 84 ESTs

name	LOC100042671 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042671
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC666809 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666809
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100041894 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Fgf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14164 MGI:95515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG545253 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545253 MGI:3646292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arhgap26 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71302 MGI:1918552
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nr3c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14815 MGI:95824
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pabpc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18459 MGI:1349723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041939 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Pcdh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130604 GeneID:75599 MGI:104692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protocadherin 1 transcript_id : NM_029357.3

name	LOC100042583 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269776 GeneID:100042583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 914 ESTs, 9 Proteins product : similar to Rpl17 protein transcript_id : XM_001478844.1

name	1700086O06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149269778 GeneID:73516 MGI:1920766
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : RIKEN cDNA 1700086O06 gene transcript_id : XM_001478852.1

name	0610009O20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383028 GeneID:66839 MGI:1914089
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610009O20 gene transcript_id : NM_024179.4

name	Pcdh12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120444907 GeneID:53601 MGI:1855700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protocadherin 12 transcript_id : NM_017378.2

name	Rnf14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910591 GeneID:56736 MGI:1929668
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 14 transcript_id : NM_020012.1

name	Gnpda1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754029 GeneID:26384 MGI:1347054
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosamine-6-phosphate deaminase 1 transcript_id : NM_011937.1

name	LOC240219 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269781 GeneID:240219
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 12 Proteins product : similar to glutamine synthetase transcript_id : XM_001478918.1

name	Ndfip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89001090 GeneID:65113 MGI:1929601
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nedd4 family interacting protein 1 transcript_id : NM_022996.1

name	Spry4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543766 GeneID:24066 MGI:1345144
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sprouty homolog 4 (Drosophila) transcript_id : NM_011898.2

name	LOC100041875 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269725 GeneID:100041875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 84 ESTs product : hypothetical protein LOC100041875 transcript_id : XM_001477150.1

name	LOC100041894 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269731 GeneID:100041894
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100041894 transcript_id : XM_001477178.1

name	Fgf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122937366 GeneID:14164 MGI:95515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor 1 transcript_id : NM_010197.3

name	EG545253 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702102 GeneID:545253 MGI:3646292
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG545253 transcript_id : NM_001033789.1

name	Arhgap26 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87159825 GeneID:71302 MGI:1918552
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 26 transcript_id : NM_175164.4

name	Nr3c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121247452 GeneID:14815 MGI:95824
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 3, group C, member 1 transcript_id : NM_008173.3

name	Pabpc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58331164 GeneID:18459 MGI:1349723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly A binding protein, cytoplasmic 2 transcript_id : NM_011033.2

name	LOC100041939 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269733 GeneID:100041939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to Mnn4p transcript_id : XM_001477237.1

name	Pcdh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328319 CCDS:CCDS29197.1 GeneID:75599 MGI:104692
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0005911 - intercellular junction [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0016339 - calcium-dependent cell-cell adhesion [Evidence TAS]; GO:0007156 - homophilic cell adhesion [Evidence TAS] codon_start : 1 product : protocadherin 1 protein_id : NP_083633.2

name	1700086O06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149269779 GeneID:73516 MGI:1920766
definition	codon_start : 1 product : hypothetical protein LOC73516 protein_id : XP_001478902.1

name	LOC100042583 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269777 GeneID:100042583
definition	codon_start : 1 product : similar to Rpl17 protein protein_id : XP_001478894.1

name	0610009O20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560224 GeneID:66839 MGI:1914089
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66839 protein_id : NP_077141.2

name	Pcdh12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120444908 CCDS:CCDS29199.1 GeneID:53601 MGI:1855700
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0016339 - calcium-dependent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IDA] codon_start : 1 note : protocadherin 14; VE-cadherin-2; vascular endothelial cadherin-2 product : protocadherin 12 protein_id : NP_059074.2

name	Rnf14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910592 CCDS:CCDS29200.1 GeneID:56736 MGI:1929668
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IEA]; GO:0019787 - small conjugating protein ligase activity [Evidence ISS]; GO:0003713 - transcription coactivator activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : TRIAD2 type I product : ring finger protein 14 protein_id : NP_064396.1

name	Gnpda1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754030 CCDS:CCDS29201.1 GeneID:26384 MGI:1347054
definition	GO_function : GO:0004342 - glucosamine-6-phosphate deaminase activity [Evidence IEA] [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007340 - acrosome reaction [Evidence TAS]; GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006002 - fructose 6-phosphate metabolism [Evidence ISS]; GO:0046370 - fructose biosynthesis [Evidence ISS]; GO:0006041 - glucosamine metabolism [Evidence ISS]; GO:0006044 - N-acetylglucosamine metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : glucose-6-phosphate isomerase product : glucosamine-6-phosphate deaminase 1 protein_id : NP_036067.1

name	LOC240219 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269782 GeneID:240219
definition	codon_start : 1 product : similar to glutamine synthetase protein_id : XP_001478968.1

name	Ndfip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89001091 GeneID:65113 MGI:1929601
definition	GO_component : GO:0016021 - integral to membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : Nedd4 WW-binding protein 5; Nedd4 WW binding protein 5 product : Nedd4 family interacting protein 1 protein_id : NP_075372.1

name	Spry4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543767 CCDS:CCDS29202.1 GeneID:24066 MGI:1345144
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0043407 - negative regulation of MAPK activity [Evidence IDA]; GO:0009966 - regulation of signal transduction [Evidence IEA] codon_start : 1 product : sprouty homolog 4 protein_id : NP_036028.2

name	LOC100041875 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269726 GeneID:100041875
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477200.1

name	LOC100041894 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269732 GeneID:100041894
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477228.1

name	Fgf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753850 CCDS:CCDS29204.1 GeneID:14164 MGI:95515
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005104 - fibroblast growth factor receptor binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001759 - induction of an organ [Evidence IDA]; GO:0030324 - lung development [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : fibroblast growth factor 1 (acidic) product : fibroblast growth factor 1 protein_id : NP_034327.1

name	EG545253 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702103 GeneID:545253 MGI:3646292
definition	codon_start : 1 product : hypothetical protein LOC545253 protein_id : NP_001028961.1

name	Arhgap26 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87159826 CCDS:CCDS29205.1 GeneID:71302 MGI:1918552
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Rho GTPase activating protein 26 protein_id : NP_780373.3

name	Nr3c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121247453 GeneID:14815 MGI:95824
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004883 - glucocorticoid receptor activity [Evidence IDA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042921 - glucocorticoid receptor signaling pathway [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : glucocorticoid receptor 1 product : nuclear receptor subfamily 3, group C, member 1 protein_id : NP_032199.3

name	Pabpc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754972 CCDS:CCDS29206.1 GeneID:18459 MGI:1349723
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008143 - poly(A) binding [Evidence TAS] [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0016071 - mRNA metabolism [Evidence ISS]; GO:0006378 - mRNA polyadenylation [Evidence TAS] codon_start : 1 note : poly A binding protein 2 product : poly A binding protein, cytoplasmic 2 protein_id : NP_035163.1

name	LOC100041939 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269734 GeneID:100041939
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477287.1

name	LOC100041839 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041839
definition	number : 1 pseudo : _no_value

name	LOC100041865 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041865
definition	number : 1 pseudo : _no_value

name	LOC100042671 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042671
definition	number : 2 pseudo : _no_value

name	LOC100042671 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042671
definition	number : 1 pseudo : _no_value

name	LOC666809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666809
definition	number : 3 pseudo : _no_value

name	LOC666809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666809
definition	number : 2 pseudo : _no_value

name	LOC666809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666809
definition	number : 1 pseudo : _no_value

name	9630014M24Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149269783 GeneID:381155 MGI:3588234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 9630014M24 gene transcript_id : XR_035375.1

clone name	MSMg01-421B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-382M16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-336J14
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-289N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-307F01.b	B6Ng01-307F01.g
ACC	GA100118	GA100119
length	1,082	990
definition	B6Ng01-307F01.b	B6Ng01-307F01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(39,348,287 - 39,349,357)	(39,207,833 - 39,208,812)
sequence	gaattccaacagtgcccgcctcctgtcaggcatgagcagagcagggcttt tcatattatgaccactcatgggcctctgcaattcaaaggctgtcacatgt cccaggagtgtggcaatcccaatcagagttcatttcaagttgcagggaat aatgaattattcaataaacagggttgtgacatcaacaatcatttgggaga agagaaagggtgagtcctgccttattttatactctgataccaaaatagaa accaggtgcacattaactttagagtagggattcattcaaggaaagacaga aaaaaaaaatgaagtcactccccactttacataaagtgcccttataataa atatgagaaaggaaaatggacccaaacagaaaatgtgaacaaatgacaaa ctgcttacagagaaatattcattcatcattaaaatatccaaagtcaacaa agaaatctaattctaacactggtgatagttttcctttttgggaataaatt attttaaaaattagcagtatctgatatcgatgtaggcttagagtaggcag ttctttatgaggttctctatgaatgggtatatgtgctcagcatgcaaatt aattctacgaactcatgctagatgaaggagcacgaagggagttcactgag agatggtgctagctgtgaaattcccctgcataggtacgtggtcctctgag atatggcactggatgcataaatcccctgcgtaggagacgttagaggttgc cttcagtttttcccagtagttaacaaaggaatcagcctcagagcccttca gagactagttggagattagtacccagcttcagagactagtttggagacta gtgcccagctccctccctgttttataggtatgaaaacaggaacaaagaac atcttggaggctaattcaccttagagagcacagggagattggcctcccac cctcgagacataacttcataatttttactttcaggtgagttccaccaata gcaggtcatttctacttcattcaaccaacaacctctctgacactgctctt gggagaccggatccagaaattatagacagctc	gaattctgcatacagttatatcccatggttatggagagagatcgagaaaa cagccagaagatctaggtttattatggaattgttagcctagagagctact tccggtttacttataaaaccagaacagcacgctcacagggtattgaagac agccagactgtatcaaatttagggatcgtttagagagaaagggagtgtga tattcattgaatttgtattccacacaattgacagaccaataaactattgg tttttgtttttgtttttgttttttctgttgttggagaacgggttgctgca ttctaagccagatttctagaaaactgaatgttggccgtttgattgtcttg aggttgtaaggttctagatgaggcttacagcattcattcatttacttttt actactgttgcactatataagagtaataaagagaaagagttgagaacagc tgttctcttcaatcagttaaaacagtacagcggcactcatgtgttgagta acggtttcctgagtgttcactgtgcttggtgccagggctgtcccagtgag caaaccagacaggtcgtgtgtatcccttcagaactcctcaggatagtctg acttcacaccaccttcattcttacagaacattagtggtgggaaggacagg gcttcctggaggagcctgctgactggcgattgctttgggtctctggccac atcactgggtatgatataactctttaggctaaagctcagatcgtccctag tcctctcttctctcactagcacctctgtcccatgtgattgcaatttccaa gacttgaagaaatttaaagtacttgataaaaacctggggtaaagtgttgg gcatgcacctgcttttttaaaacaggggcctgctctttgtccatgactcg ggcctctccttattgtgcctcatcgctgtactgtacaaactgagttctgt gcagttttagtgttttcgtatgctttcctctgaatatcgg
quality values	Open. Hide. 47 14 19 35 54 58 32 15 54 41 41 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 42 51 62 43 56 51 56 44 21 35 28 28 59 43 62 62 59 62 62 62 62 62 49 62 59 56 62 59 62 62 62 59 62 62 62 59 59 62 62 59 59 62 62 62 54 49 49 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 52 58 58 54 58 41 58 58 58 58 58 58 58 58 58 54 47 54 52 58 42 36 37 54 58 58 54 58 52 58 58 58 58 54 58 58 58 58 54 54 54 46 58 58 58 58 58 54 58 52 58 58 58 58 58 49 49 58 54 58 50 51 53 58 58 53 50 51 49 58 49 50 58 58 53 58 58 58 58 51 52 58 47 54 58 51 37 58 58 50 51 54 49 54 58 49 33 58 58 58 50 41 51 50 50 41 49 58 46 39 46 40 35 33 51 44 30 58 51 50 50 50 58 53 58 52 58 58 58 58 49 53 51 58 58 58 50 51 50 50 44 50 25 58 37 50 46 47 50 54 49 50 51 58 49 53 49 49 58 34 53 39 39 41 58 58 31 49 47 50 51 58 49 39 51 51 40 53 42 54 44 53 54 54 54 51 28 51 51 41 32 51 35 54 54 31 53 24 35 38 41 49 42 40 20 42 41 39 41 42 54 44 37 32 32 26 49 54 54 54 45 40 54 38 40 37 32 40 28 53 40 30 47 37 52 54 42 34 44 37 31 25 53 45 28 37 54 52 42 40 33 37 18 42 40 40 27 31 32 34 27 51 21 34 26 30 31 32 53 36 40 40 24 14 19 5 9 19 31 32 32 37 53 52 35 32 38 47 31 31 27 14 31 14 30 26 31 42 32 31 46 19 29 51 46 23 31 28 31 30 24 31 41 25 51 18 21 35 36 45 31 51 32 27 30 41 33 25 46 29 46 46 28 31 31 31 31 46 24 31 31 31 42 42 46 23 22 10 9 16 36 33 32 17 31 20 18 8 13 15 15 30 31 31 23 31 30 32 12 20 12 31 33 17 13 24 31 24 39 31 32 41 36 19 37 32 42 35 31 32 31 30 27 38 19 5 13 9 6 35 22 31 24 31 26 13 38 10 44 8 41 9 23 31 21 20 18 31 24 11 26 11 8 9 11 7 26 25 37 14 20 13 41 39 39 28 30 30 20 34 18 13 6 5 31 6 21 37 9 5 13 17 6 7 12 30 8 15 34 32 21 15 14 16 19 22 21 14 5 34 10 19 32 25 32 17 7 34 14 10 9 10 14 15 11 20 9 6 20 10 11 7 20 9 6 5 6 6 9 16 7 7 18 22 29 16 11 6 7 8 21 29 9 20 7 24 4 5 12 14 11 5 25 26 6 8 9 11 17 9 3 9 5 13 7 23 11 10 11 11 21 10	Open. Hide. 62 47 34 42 62 62 62 54 62 62 62 42 50 22 21 26 18 32 56 51 51 62 62 54 47 62 54 62 62 54 62 62 62 62 59 59 59 59 59 59 43 43 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 58 58 58 54 54 52 47 54 54 58 58 58 52 54 54 54 48 54 54 54 52 54 54 52 47 47 52 54 54 46 58 52 58 52 54 58 58 58 58 58 58 58 52 42 58 45 54 54 58 58 54 52 50 35 58 54 49 54 50 54 54 58 58 54 46 54 58 58 32 54 41 32 54 52 45 58 54 58 51 52 45 58 54 53 53 52 50 50 50 58 49 52 50 58 51 50 50 49 58 32 38 58 58 58 58 44 25 58 46 46 50 41 49 41 40 51 53 50 48 51 37 50 45 16 58 39 9 35 54 41 54 50 50 48 40 41 49 58 58 50 50 47 37 49 51 50 50 58 41 50 58 51 49 52 39 53 50 51 40 24 25 25 51 36 49 31 46 53 50 49 58 50 50 33 33 39 53 28 38 53 51 40 47 53 39 19 44 13 25 8 38 32 41 19 58 40 40 42 50 28 39 18 29 16 49 40 35 39 58 54 35 39 23 44 25 18 26 42 53 42 39 42 40 49 51 49 40 37 35 28 20 11 25 12 11 35 49 45 34 39 32 26 40 42 26 35 51 34 32 21 8 33 39 40 35 31 21 54 51 51 25 31 29 26 42 32 35 27 42 33 41 37 52 52 52 40 52 38 37 40 29 41 29 31 31 33 40 35 19 19 30 45 45 34 45 32 35 34 32 40 46 25 9 16 53 16 18 40 31 10 41 38 40 31 25 31 32 31 31 22 27 31 25 38 9 6 46 51 52 53 39 41 45 53 31 28 32 6 41 40 51 38 30 25 30 31 31 11 7 22 6 10 37 29 29 31 36 31 31 22 30 27 16 40 40 30 32 9 22 30 26 28 31 18 33 22 7 6 21 31 27 35 33 31 32 28 30 13 25 29 23 31 32 31 28 31 11 12 22 10 42 21 15 14 21 31 11 23 9 12 17 17 22 14 25 18 11 6 41 43 14 9 13 10 31 13 41 39 14 32 22 18 30 22 32 11 9 23 25 27 21 30 34 31 22 25 14 17 15 28 25 11 32

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_39348287_39349357
seq2: B6Ng01-307F01.b_46_1127 (reverse)

seq1  GAGCTGTCTATAATTTCTGGGTCCGTTCTCCC-AGAGCAGTGTCAGAGAG  49
      |||||||||||||||||||| |||| |||||| |||||||||||||||||
seq2  GAGCTGTCTATAATTTCTGGATCCGGTCTCCCAAGAGCAGTGTCAGAGAG  50

seq1  GTTGGTGGTTG-ATGGAGTAG-AATGACCTGCTA-TGGTG--ACTCACCT  94
      |||| |||||| ||| ||||| |||||||||||| |||||  ||||||||
seq2  GTTGTTGGTTGAATGAAGTAGAAATGACCTGCTATTGGTGGAACTCACCT  100

seq1  G-AAGTAAAAATTATGA--GTATGTCTCGA-GGTTGGAGGCCAATCTCCC  140
      | |||||||||||||||   |||||||||| ||| |||||||||||||||
seq2  GAAAGTAAAAATTATGAAGTTATGTCTCGAGGGTGGGAGGCCAATCTCCC  150

seq1  TGTGCTCTCTAAGGTGAATTAGCCTCCAAGATGTTCTTTGTTCCTGTTTT  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTCTAAGGTGAATTAGCCTCCAAGATGTTCTTTGTTCCTGTTTT  200

seq1  CATACCTATAAAACAGGGAGGGAGCTGGGCACTAGTCTCC-AACTAGTCT  239
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CATACCTATAAAACAGGGAGGGAGCTGGGCACTAGTCTCCAAACTAGTCT  250

seq1  CTGAAGCTGGGTACTAATCTCCAACTAGTCTCTGAAGGGCTCTGAGGCTG  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCTGGGTACTAATCTCCAACTAGTCTCTGAAGGGCTCTGAGGCTG  300

seq1  ATTCCTTTGTTAACTACTGGGAAAAACTGAAGGCAACCTCTAACGTCTCC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTGTTAACTACTGGGAAAAACTGAAGGCAACCTCTAACGTCTCC  350

seq1  TACGCAGGGGATTTATGCATCCAGTGCCATATCTCAGAGGACCACGTACC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCAGGGGATTTATGCATCCAGTGCCATATCTCAGAGGACCACGTACC  400

seq1  TATGCAGGGGAATTTCACAGCTAGCACCATCTCTCAGTGAACTCCCTTCG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGGGGAATTTCACAGCTAGCACCATCTCTCAGTGAACTCCCTTCG  450

seq1  TGCTCCTTCATCTAGCATGAGTTCGTAGAATTAATTTGCATGCTGAGCAC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTCATCTAGCATGAGTTCGTAGAATTAATTTGCATGCTGAGCAC  500

seq1  ATATACCCATTCATAGAGAACCTCATAAAGAACTGCCTACTCTAAGCCTA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCCATTCATAGAGAACCTCATAAAGAACTGCCTACTCTAAGCCTA  550

seq1  CATCGATATCAGATACTGCTAATTTTTAAAATAATTTATTCCCAAAAAGG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGATATCAGATACTGCTAATTTTTAAAATAATTTATTCCCAAAAAGG  600

seq1  AAAACTATCACCAGTGTTAGAATTAGATTTCTTTGTTGACTTTGGATATT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATCACCAGTGTTAGAATTAGATTTCTTTGTTGACTTTGGATATT  650

seq1  TTAATGATGAATGAATATTTCTCTGTAAGCAGTTTGTCATTTGTTCACAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATGAATGAATATTTCTCTGTAAGCAGTTTGTCATTTGTTCACAT  700

seq1  TTTCTGTTTGGGTCCATTTTCCTTTCTCATATTTATTATAAGGGCACTTT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTGGGTCCATTTTCCTTTCTCATATTTATTATAAGGGCACTTT  750

seq1  ATGTAAAGTGGGGAGTGACTTCATTTTTTTTTTCTGTCTTTCCTTGAATG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAGTGGGGAGTGACTTCATTTTTTTTTTCTGTCTTTCCTTGAATG  800

seq1  AATCCCTACTCTAAAGTTAATGTGCACCTGGTTTCTATTTTGGTATCAGA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTACTCTAAAGTTAATGTGCACCTGGTTTCTATTTTGGTATCAGA  850

seq1  GTATAAAATAAGGCAGGACTCACCCTTTCTCTTCTCCCAAATGATTGTTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAATAAGGCAGGACTCACCCTTTCTCTTCTCCCAAATGATTGTTG  900

seq1  ATGTCACAACCCTGTTTATTGAATAATTCATTATTCCCTGCAACTTGAAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACAACCCTGTTTATTGAATAATTCATTATTCCCTGCAACTTGAAA  950

seq1  TGAACTCTGATTGGGATTGCCACACTCCTGGGACATGTGACAGCCTTTGA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCTGATTGGGATTGCCACACTCCTGGGACATGTGACAGCCTTTGA  1000

seq1  ATTGCAGAGGCCCATGAGTGGTCATAATATGAAAAGCCCTGCTCTGCTCA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGAGGCCCATGAGTGGTCATAATATGAAAAGCCCTGCTCTGCTCA  1050

seq1  TGCCTGACAGGAGGCGGGCACTGTTGGAATTC  1071
      ||||||||||||||||||||||||||||||||
seq2  TGCCTGACAGGAGGCGGGCACTGTTGGAATTC  1082

seq1: chr18_39207833_39208812
seq2: B6Ng01-307F01.g_67_1056

seq1  GAATTCTGCATACAGTTATATCCCATGGTTATGGAGAGAGATCGAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATACAGTTATATCCCATGGTTATGGAGAGAGATCGAGAAAA  50

seq1  CAGCCAGAAGATCTAGGTTTATTATGGAATTGTTAGCCTAGAGAGCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGAAGATCTAGGTTTATTATGGAATTGTTAGCCTAGAGAGCTACT  100

seq1  TCCGGTTTACTTATAAAACCAGAACAGCACGCTCACAGGGTATTGAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGTTTACTTATAAAACCAGAACAGCACGCTCACAGGGTATTGAAGAC  150

seq1  AGCCAGACTGTATCAAATTTAGGGATCGTTTAGAGAGAAAGGGAGTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGACTGTATCAAATTTAGGGATCGTTTAGAGAGAAAGGGAGTGTGA  200

seq1  TATTCATTGAATTTGTATTCCACACAATTGACAGACCAATAAACTATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTGAATTTGTATTCCACACAATTGACAGACCAATAAACTATTGG  250

seq1  TTTTTGTTTTTGTTTTTGTTTTTTCTGTTGTTGGAGAACGGGTTGCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTGTTTTTGTTTTTTCTGTTGTTGGAGAACGGGTTGCTGCA  300

seq1  TTCTAAGCCAGATTTCTAGAAAACTGAATGTTGGCCGTTTGATTGTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGCCAGATTTCTAGAAAACTGAATGTTGGCCGTTTGATTGTCTTG  350

seq1  AGGTTGTAAGGTTCTAGATGAGGCTTACAGCATTCATTCATTTACTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTAAGGTTCTAGATGAGGCTTACAGCATTCATTCATTTACTTTTT  400

seq1  ACTACTGTTGCACTATATAAGAGTAATAAAGAGAAAGAGTTGAGAACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGTTGCACTATATAAGAGTAATAAAGAGAAAGAGTTGAGAACAGC  450

seq1  TGTTCTCTTCAATCAGTTAAAACAGTACAGCGGCACTCATGTGTTGAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTTCAATCAGTTAAAACAGTACAGCGGCACTCATGTGTTGAGTA  500

seq1  ACGGTTTCCTGAGTGTTCACTGTGCTTGGTGCCAGGGCTGTCCCAGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTTCCTGAGTGTTCACTGTGCTTGGTGCCAGGGCTGTCCCAGTGAG  550

seq1  CAAACCAGACAGGTCGTGTGTATCCCTTCAGAACTCCTCAGGATAGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAGACAGGTCGTGTGTATCCCTTCAGAACTCCTCAGGATAGTCTG  600

seq1  ACTTCACACCACCTTCATTCTTACAGAACATTAGTGGTGGGAAGGACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACACCACCTTCATTCTTACAGAACATTAGTGGTGGGAAGGACAGG  650

seq1  GCTTCCTGGAGGAGCCTGCTGACTGGCGATTGCTTTGGGTCTCTGGCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTGGAGGAGCCTGCTGACTGGCGATTGCTTTGGGTCTCTGGCCAC  700

seq1  ATCACTGGGTATGATATAACTC-TTAGGCTAAAGCTCAGATCGTCCCTAG  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATCACTGGGTATGATATAACTCTTTAGGCTAAAGCTCAGATCGTCCCTAG  750

seq1  TCCTCTCTTCTCTCACTAGCACCTCTGTCCCATGTGATTGCAATTTCCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTTCTCTCACTAGCACCTCTGTCCCATGTGATTGCAATTTCCAA  800

seq1  GACTTGAAGAAATTTAAAGTACTTGATAAAAACCTGGGGT-AAGTGTTGG  848
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GACTTGAAGAAATTTAAAGTACTTGATAAAAACCTGGGGTAAAGTGTTGG  850

seq1  GCATGCACCTGC-TTTTTAAAACAGGGGCCTGCTC-TTGTCCATGACTCG  896
      |||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  GCATGCACCTGCTTTTTTAAAACAGGGGCCTGCTCTTTGTCCATGACTCG  900

seq1  GGCCTCTCCTTA-TGTGCCTCATCGCTGTACTGTAC-AACTGAG-TCTGT  943
      |||||||||||| ||||||||||||||||||||||| ||||||| |||||
seq2  GGCCTCTCCTTATTGTGCCTCATCGCTGTACTGTACAAACTGAGTTCTGT  950

seq1  GCAG-TTTAGTG-TTTCGTATGC-TTCCTCTGAATATCGG  980
      |||| ||||||| |||||||||| ||||||||||||||||
seq2  GCAGTTTTAGTGTTTTCGTATGCTTTCCTCTGAATATCGG  990

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Alignment Information