BAC Information

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BAC

Clone NameB6Ng01-307P21
Chromosome18 (Build37)
Map Location 18,956,162 - 18,957,226
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040647
Downstream geneLOC100040658, LOC665624, LOC665629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307P21.bB6Ng01-307P21.g
ACCGA100614GA100615
length1,1081,141
definitionB6Ng01-307P21.b B6Ng01-307P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattactgtagtcattaaatgatacctataaggaaatttactaga
aggtatgaacaacatatataataactctaaattcgaagttcttaataagc
taaaatattgatagactgctctcttagaagttaaagttttattgctctga
agagacaccatgtccttggcaacacttatactgcacagtatttttgttgg
ggctggcttttagtttgaagtttagtccattatcatcatattaggaagca
tggaaacatacaagcagacatggtggtgtagaggtacttgagaattctac
attcagatccataagcagaaagaagagagagggacactgggtctgtcttg
agcttcttaaacctcaaagatcactcccagtgacatacttcctccattaa
gaccacacctcttaatggtgctacagtctttgggtctatgggggccattt
ccatttaaataaccacaactgctgtgttagaggataagcagtcacacttt
tacaatgatgtaagcatgtaacagaaattcataataaaaattataattaa
ttatggagacaatatgtgtggcaaaccttcttattttgttttcttttaga
gatggaatatggaaccaaggaccccatgttttctaggaagcactatgcct
ataacctatatccctagccccaaacatttgatttttaaataataactaat
caaatatttgcattgagaaacaagaagctagctacttataaacagcatac
catacttcgggaaaatctgattttgcttttactaataatgaagtccaaaa
aattctgtttcacgggggcatagtttgttacttctttactggataatttt
acctatgatattccattttaacatataatacaatagtataaacgaagtgc
tgctattattctttttatcttccattttaaaattggatatttcctttatt
tttacatttcaaatgtttcactcttcccaggtctcgtttctgacgccctc
tccctctcctctcctctcctctgtttctatgagtatgctcccccaacatc
acaactcccattttctgcctgcatccctacaactgagccatggacaccct
caagctca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccaccttactccagtcagaatggctaagataaaaaattcaggtgatagt
agatgctggcaaggatgtggagaaagaggaacactcctccattattggtg
ggattacaaggttgtacaaccactctggaaatcagttcctcagaaaattg
gacatagtactacgagaggatccagcaatacctctcctgggcatatatcc
agaagaggtctcaccctgtaagaaggacacatgctctactattttcatag
cagccttatttataatagccagaagctggaaagaacccatatgcccctca
acagaggaatggatacagaaaatgtattacatttacacaatggagtacta
ctcagatattaaaaagaatgaatttatgaaattcctaggcaaatggatgg
acctgtagggcatcatcctgagtgaggtaacccaatcacaaaagaactca
catgaaatgtactcactgataagtggatgttagcccagaaaattaggata
cccaagatataagatacaatttgctaaactcatgaaactcaagaagactt
gaggatactttgccccttcttagaattgggaacaaaacacccatggaagg
agttacagagacaaagtttggaactgagacgaaaggatggaccatctaga
gacttccatatctggggatccatcccataatcagcttccaaaagctgaca
ccattgcacataccagcaagattttgctgaaaggacctagatagagctct
catttgtgagactatgctggggcctagaaaacacagaagtagatgctcac
agtcagctattgaatggatcacatggcccccaatggagtgctagagaaag
tacccaagagctaaagggatctgcacctataggtgacacattatgactaa
ccagtaccctgactctgactctagctgcatatgtatcagaagataggcta
gtcaggcatctctgcaaagaagagtccatgaactggccaacttaatgcca
tgcagaatgcagtcacattggtattggttggctgagggcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18956162_18957226
seq2: B6Ng01-307P21.b_105_1155 (reverse)

seq1  TGAGCCTGAGGGTGTTCATTGCTTCAG-TGTAGGGGAATGCCAGGGCAGG  49
      ||||| ||||||||| ||| || |||| |||||||  ||||   |||| |
seq2  TGAGCTTGAGGGTGTCCATGGC-TCAGTTGTAGGG--ATGC--AGGCA-G  44

seq1  AAAATGGGAGTGGTTGGATGTTTGGGGGAGCATACTCATAGAAACAGAGG  99
      ||||||||||| ||  |||| ||||||||||||||||||||||||||| |
seq2  AAAATGGGAGTTGT--GATG-TTGGGGGAGCATACTCATAGAAACAGA-G  90

seq1  GAGAGGGAGAGGGAGAGGGAGAGGGGCCTTCAGAAACGGAGACCTGGGAA  149
      |||| ||||| ||||||||||||||  | |||||||| ||||||||||||
seq2  GAGA-GGAGA-GGAGAGGGAGAGGG--CGTCAGAAAC-GAGACCTGGGAA  135

seq1  GAGTGAAACATTTGAAATGTAAAAATAAAGGAAATATCCAATTTTAAAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAAACATTTGAAATGTAAAAATAAAGGAAATATCCAATTTTAAAAT  185

seq1  GGAAGATAAAAAGAATAATAGCAGCACTTCGTTTATACTATTGTATTATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATAAAAAGAATAATAGCAGCACTTCGTTTATACTATTGTATTATA  235

seq1  TGTTAAAATGGAATATCATAGGTAAAATTATCCAGTAAAGAAGTAACAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAATGGAATATCATAGGTAAAATTATCCAGTAAAGAAGTAACAAA  285

seq1  CTATGCCCCCCTGAAACAGAATTTTTTGGACTTCATTATTAGTAAAAGCA  349
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCCCCGTGAAACAGAATTTTTTGGACTTCATTATTAGTAAAAGCA  335

seq1  AAATCAGATTTTCCCGAAGTATGGTATGCTGTTTATAAGTAGCTAGCTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGATTTTCCCGAAGTATGGTATGCTGTTTATAAGTAGCTAGCTTC  385

seq1  TTGTTTCTCAATGCAAATATTTGATTAGTTATTATTTAAAAATCAAATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTCAATGCAAATATTTGATTAGTTATTATTTAAAAATCAAATGT  435

seq1  TTGGGGCTAGGGATATAGGTTATAGGCATAGTGCTTCCTAGAAAACATGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCTAGGGATATAGGTTATAGGCATAGTGCTTCCTAGAAAACATGG  485

seq1  GGTCCTTGGTTCCATATTCCATCTCTAAAAGAAAACAAAATAAGAAGGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTGGTTCCATATTCCATCTCTAAAAGAAAACAAAATAAGAAGGTT  535

seq1  TGCCACACATATTGTCTCCATAATTAATTATAATTTTTATTATGAATTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACACATATTGTCTCCATAATTAATTATAATTTTTATTATGAATTTC  585

seq1  TGTTACATGCTTACATCATTGTAAAAGTGTGACTGCTTATCCTCTAACAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATGCTTACATCATTGTAAAAGTGTGACTGCTTATCCTCTAACAC  635

seq1  AGCAGTTGTGGTTATTTAAATGGAAATGGCCCCCATAGACCCAAAGACTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTGTGGTTATTTAAATGGAAATGGCCCCCATAGACCCAAAGACTG  685

seq1  TAGCACCATTAAGAGGTGTGGTCTTAATGGAGGAAGTATGTCACTGGGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACCATTAAGAGGTGTGGTCTTAATGGAGGAAGTATGTCACTGGGAG  735

seq1  TGATCTTTGAGGTTTAAGAAGCTCAAGACAGACCCAGTGTCCCTCTCTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTGAGGTTTAAGAAGCTCAAGACAGACCCAGTGTCCCTCTCTCT  785

seq1  TCTTTCTGCTTATGGATCTGAATGTAGAATTCTCAAGTACCTCTACACCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGCTTATGGATCTGAATGTAGAATTCTCAAGTACCTCTACACCA  835

seq1  CCATGTCTGCTTGTATGTTTCCATGCTTCCTAATATGATGATAATGGACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCTGCTTGTATGTTTCCATGCTTCCTAATATGATGATAATGGACT  885

seq1  AAACTTCAAACTAAAAGCCAGCCCCAACAAAAATACTGTGCAGTATAAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCAAACTAAAAGCCAGCCCCAACAAAAATACTGTGCAGTATAAGT  935

seq1  GTTGCCAAGGACATGGTGTCTCTTCAGAGCAATAAAACTTTAACTTCTAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAAGGACATGGTGTCTCTTCAGAGCAATAAAACTTTAACTTCTAA  985

seq1  GAGAGCAGTCTATCAATATTTTAGCTTATTAAGAACTTCGAATTTAGAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGTCTATCAATATTTTAGCTTATTAAGAACTTCGAATTTAGAGT  1035

seq1  TATTATATATGTTGTT  1065
      ||||||||||||||||
seq2  TATTATATATGTTGTT  1051