BAC Information

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BAC

Clone NameB6Ng01-309B19
Chromosome18 (Build37)
Map Location 28,886,424 - 28,887,597
singlet/doubletsinglet
Overlap genenone
Upstream geneEG271505, EG625997, BC051408
Downstream geneLOC100040930, 4930578E11Rik, LOC666073
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309B19.bB6Ng01-309B19.g
ACCGA101434GA101435
length1,0221,179
definitionB6Ng01-309B19.b B6Ng01-309B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaacttagactccagaaaaccaaataaccctattgaaaaaac
agagtacagagctaagcaaagaattctcaaaaggaatatcaaatggccta
gaagcacctaatgcagtgttcaacgtacttagtcatcctggaaatgaaaa
taaatacaaccctgaggttcaacgttacaccattcagaatggctaagatc
aaaaactcaggtgatgctggctaggatgtgtagaaagaggaaaactactc
cattgtgggtgggattgcaagctagcacaaccactctggaaatcagtcag
gtggttcctcagaaaattagacttagtgttacctagggagccaactctac
cactcctgggcatatacccaaaagatgctccaacatataacaaggacaca
tactccactatattcatagcagtcttctttataatagccagaagctggaa
agaactcagatgtccctcaacagagaaatggattcagaaaatgtggtaca
tttacacaatggaatacaactcagctattaaaaacaatgacttcacaaaa
ttcttagggaaatggatagaactagaaattatcatcctgagtgaggtaac
ccagtcataaaagaacatacatagtgtgttctcactgataactaggtatt
tgcccaaaacttgaaatacccaaaatataactcacagacaacaggaagct
catgaagaaagaagaccaaagtgtagatgcttcagtccttcttcgaagac
agaacaaaatactcacaggaggaaatatggagacaaaagtatggagtaga
gactgtaggataggtcaacaatcccatacacagccacaaacctttgacac
tgttctggattatcaataaagtgctatgacagggaacctgatacagttgt
ctcctgagaggctctgccagagcccttggcaagtacagaggtggatgctc
tcagccaaccatttgactgaaggatccccaattgaaggagttagaaggga
ctgaaaggagatgaaaggggtt

gaattcaactctgcctggatctcctgtgacaagttcgtgagtaagcaaca
taaaatgaaagccttaactactgtagaaccatggagaatgaagaaaacct
acaaaccaaaattgctttgaagagtacttgccaggtaaataatcacctta
aatcgaggactgtgaaggacttaagacaaaggacttgtggccttttgtct
gccaccagcctgttccatgtgcatggaactgctcaacaagtacaaagagg
aaaatctctggtcaatcaaccatcctacttttcttcaaactgatcaacaa
taatttaggaatggaaaaactcttcttagtctttgagaaagagactggat
tttgggacctttcttcaactgctaattttgtcttctgatgtctgtggtaa
ctgctgtgcttgattttcctctttgagttccctaactgacagcagaatga
acctagtcaagagccataggctttaaaatattgttttaaattagcacctc
agttaaccattcatcctgagattctttgagacctaagagaaacgaaatga
tcttttctgactgaaagaaagaatgctatgaattgagccacttctacaag
ggcatagacacaaaacagacaaggaaggcttaagataataatctccgtac
tgcccatttggtcttatgagtttacaggacaggaggaatacgggaagctc
ctatcaattctcagccttttgattctccttcctgccttctttcctgccct
ctctgctccatccttttcccctccctttggttcttttctttttatgctat
ttacgttaaaatgaaatcagaatattcttacccttctttatttctgcaga
accttcttgaaaacaagactacagagacaacagctctatgtggggtcaga
gcacttgagatttcccaaatcctcctgcctgcagcacacacacacacaca
cacacactcgcgtgagcgcacacacacacacacaaacctgcagatcttat
tatccacagtatactctctacaccaattctgcagttctgacttacactag
catgagaaagcctgaaccacccagaacagatgatggctgttgagcacagt
catgaaagaaaaagcaaggtcaacccaatggtcttcagcctgaatcgaac
ctattcaggaaacaagaggcctcagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28886424_28887597
seq2: B6Ng01-309B19.g_66_1244

seq1  GAATTCAACTCTGCCTGGATCTCCTGTGACAAGTTCGTGAGTAAGCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCTGCCTGGATCTCCTGTGACAAGTTCGTGAGTAAGCAACA  50

seq1  TAAAATGAAAGCCTTAACTACTGTAGAACCATGGAGAATGAAGAAAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAAAGCCTTAACTACTGTAGAACCATGGAGAATGAAGAAAACCT  100

seq1  ACAAACCAAAATTGCTTTGAAGAGTACTTGCCAGGTAAATAATCACCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCAAAATTGCTTTGAAGAGTACTTGCCAGGTAAATAATCACCTTA  150

seq1  AATCGAGGACTGTGAAGGACTTAAGACAAAGGACTTGTGGCCTTTTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGAGGACTGTGAAGGACTTAAGACAAAGGACTTGTGGCCTTTTGTCT  200

seq1  GCCACCAGCCTGTTCCATGTGCATGGAACTGCTCAACAAGTACAAAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGCCTGTTCCATGTGCATGGAACTGCTCAACAAGTACAAAGAGG  250

seq1  AAAATCTCTGGTCAATCAACCATCCTACTTTTCTTCAAACTGATCAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCTGGTCAATCAACCATCCTACTTTTCTTCAAACTGATCAACAA  300

seq1  TAATTTAGGAATGGAAAAACTCTTCTTAGTCTTTGAGAAAGAGACTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGGAATGGAAAAACTCTTCTTAGTCTTTGAGAAAGAGACTGGAT  350

seq1  TTTGGGACCTTTCTTCAACTGCTAATTTTGTCTTCTGATGTCTGTGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGACCTTTCTTCAACTGCTAATTTTGTCTTCTGATGTCTGTGGTAA  400

seq1  CTGCTGTGCTTGATTTTCCTCTTTGAGTTCCCTAACTGACAGCAGAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGCTTGATTTTCCTCTTTGAGTTCCCTAACTGACAGCAGAATGA  450

seq1  ACCTAGTCAAGAGCCATAGGCTTTAAAATATTGTTTTAAATTAGCACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTCAAGAGCCATAGGCTTTAAAATATTGTTTTAAATTAGCACCTC  500

seq1  AGTTAACCATTCATCCTGAGATTCTTTGAGACCTAAGAGAAACGAAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACCATTCATCCTGAGATTCTTTGAGACCTAAGAGAAACGAAATGA  550

seq1  TCTTTTCTGACTGAAAGAAAGAATGCTATGAATTGAGCCACTTCTACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTGACTGAAAGAAAGAATGCTATGAATTGAGCCACTTCTACAAG  600

seq1  GGCATAGACACAAAACAGACAAGGAAGGCTTAAGATAATAATCTCCGTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGACACAAAACAGACAAGGAAGGCTTAAGATAATAATCTCCGTAC  650

seq1  TGCCCATTTGGTCTTATGAGTTTACAGGACAGGAGGAATACGGGAAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATTTGGTCTTATGAGTTTACAGGACAGGAGGAATACGGGAAGCTC  700

seq1  CTATCAATTCTCAGCCTTTTGATTCTCCTTCCTGCCTTCTTTCCTGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAATTCTCAGCCTTTTGATTCTCCTTCCTGCCTTCTTTCCTGCCCT  750

seq1  CTCTGCTCCATCCTTTTCCCCTCCCTTTGGTTCTTTTCTTTTTATGCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTCCATCCTTTTCCCCTCCCTTTGGTTCTTTTCTTTTTATGCTAT  800

seq1  TTACGTTAAAATGAAATCAGAATATTCTTACCCTTCTTTATTTCTGCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTTAAAATGAAATCAGAATATTCTTACCCTTCTTTATTTCTGCAGA  850

seq1  ACCTTCTTGAAAACAAGACTACAGAGACAACAGCTCTATGTGGGGTCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTGAAAACAAGACTACAGAGACAACAGCTCTATGTGGGGTCAGA  900

seq1  GCACTTGAGATTTCCCAAATCCTCCTGCCTGCAGCACACACACACACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGAGATTTCCCAAATCCTCCTGCCTGCAGCACACACACACACACA  950

seq1  CACACACTCGCGTGAGCGCACACACACACACACAAACCTGCAGATC-TAT  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CACACACTCGCGTGAGCGCACACACACACACACAAACCTGCAGATCTTAT  1000

seq1  TATCCACAGTATACTCTCTACACCAA-TCTGCAGTTTCTGACTTAACACT  1048
      |||||||||||||||||||||||||| ||||||| ||||||||| |||||
seq2  TATCCACAGTATACTCTCTACACCAATTCTGCAG-TTCTGACTT-ACACT  1048

seq1  AGCATGAGAAAG-CTG-ACCACCCAGAACAGATGATGGCTGTGAGGCACA  1096
      |||||||||||| ||| |||||||||||||||||||||||||   |||||
seq2  AGCATGAGAAAGCCTGAACCACCCAGAACAGATGATGGCTGTTGAGCACA  1098

seq1  GGCCATGAAAGAAAAGCAAAGGTCAACCCA--TGTCCTCAGGCTTGATCA  1144
       | ||||||||||||   ||||||||||||   ||| |||| ||  ||| 
seq2  -GTCATGAAAGAAAAAGCAAGGTCAACCCAATGGTCTTCAGCCTGAATCG  1147

seq1  GAACTA-TCAGGAAACAAGAGG-CACAGAAGA  1174
       | ||| ||||||||||||||| | |||||||
seq2  AACCTATTCAGGAAACAAGAGGCCTCAGAAGA  1179


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