BAC Information

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BAC

Clone NameB6Ng01-310K03
Chromosome18 (Build37)
Map Location 14,299,949 - 14,468,441
singlet/doubletdoublet
Overlap geneLOC100040103, LOC100040391
Upstream geneLOC665379, LOC100040358, Zfp521, LOC100040094
Downstream geneLOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310K03.bB6Ng01-310K03.g
ACCGA102559GA102560
length2531,156
definitionB6Ng01-310K03.b B6Ng01-310K03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,468,189 - 14,468,441)(14,299,949 - 14,301,127)
sequence
caggacatccagagctacacagaaaaaccctgtatctcaaaaaaaaaatg
tagttgggtacttttctcaaatgtatatgtctgttcccacagaggctagg
aaagagtatcaggtcgtcagaaacggggatgacagtgttgtgaattacca
ggtaggtgctcttaacagtggagccaccgctccaggccctgattagtcct
ctctccccctctccccctccccctctccctccctctccccctcaccctct
ctc

gaattctcgtctattaacaagttaaatccattcactccctttagttcacc
caagctttttaaacaagcaattggctgatagtagtgatcaaaggccttat
ctgccctgcaaaatccgtgtcctatagacacaaacagaaacaatgccaaa
gaatgtacaaccctcaaaggaataatttattagatagatataactattga
ttggtgagtagggacaaggcaaatgagtgaataaattagagactaatgaa
ggcaagaatccagaggcccaaagagggagggtgggcgggatgaccaaatg
aaccccacagcctcagtgatcttaaccgtctattattttgtcatttgatg
gagttgaatgtaccgcctcaaaggctttttaattattaacttcaggagtg
aaatttgcattcacatatatattaataaattccttatggtaattatgcca
aaattaacacagattaaaaaatagaaacattaactccctatgaccaaaac
aaccagaagaactcgggaaaagtccttctttaaagcaggaggctaacctc
taagtgaactgccccagcagcgccacacagattaaaaggccagtaaaaca
aaagcaaccaatgtgacaattttttatgtaagtataattttattccagat
aggcaacaattccttctgaaaatgaaatgacttcaaaaatctagcaaagg
agccagtaatgactgcaaagcctctcatatttcttttaagaaattaaatt
aaatcgtttttcattttgatggagagaacagagaggaaaatgccctgaaa
acatgaacattttggagttttggaaacaggaagcaaggactatcttctct
tctactcagatttgctccccaggtgcagctctgtcattatagagcatatg
tatggttttatggcttttgtaaacccatgaattccagggttgtgacagag
aaactaaactgcttttacatagtgacatgaccagtgacttcagatagtat
atgccagctgcataaaatagatcatatattgtcaaatagaaatagcaccg
aggctcatgtatgtaaatattatgaatgcagctcatgacagatgcatgct
gcgctgtgcattccacttggaccttagaattgagaggactagcatgatgc
actctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14468189_14468441
seq2: B6Ng01-310K03.b_52_304 (reverse)

seq1  GAGAGAGGGAGAGGGGGAGAGGGAGGGAGAGGGGGAGGGGGAGAGGGGGA  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGGTGAGGGGGAGAGGGAGGGAGAGGGGGAGGGGGAGAGGGGGA  50

seq1  GAGAGGACTAATCAGGGCCTGGAGCGGTGGCTCCACTGTTAAGAGCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGACTAATCAGGGCCTGGAGCGGTGGCTCCACTGTTAAGAGCACCT  100

seq1  ACCTGGTAATTCACAACACTGTCATCCCCGTTTCTGACGACCTGATACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGTAATTCACAACACTGTCATCCCCGTTTCTGACGACCTGATACTC  150

seq1  TTTCCTAGCCTCTGTGGGAACAGACATATACATTTGAGAAAAGTACCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGCCTCTGTGGGAACAGACATATACATTTGAGAAAAGTACCCAA  200

seq1  CTACATTTTTTTTTTGAGATACAGGGTTTTTCTGTGTAGCTCTGGATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTTTTTTTTGAGATACAGGGTTTTTCTGTGTAGCTCTGGATGTC  250

seq1  CTG  253
      |||
seq2  CTG  253


seq1: chr18_14299949_14301127
seq2: B6Ng01-310K03.g_67_1222

seq1  GAATTCTCGTCTATTAACAAGTTAAATCCATTCACTCCCTTTAGTTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGTCTATTAACAAGTTAAATCCATTCACTCCCTTTAGTTCACC  50

seq1  CAAGCTTTTTAAACAAGCAATTGGCTGATAGTAGTGATCAAAGGCCTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTTTTAAACAAGCAATTGGCTGATAGTAGTGATCAAAGGCCTTAT  100

seq1  CTGCCCTGCAAAATCCGTGTCCTATAGACACAAACAGAAACAATGCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTGCAAAATCCGTGTCCTATAGACACAAACAGAAACAATGCCAAA  150

seq1  GAATGTACAACCCTCAAAGGAATAATTTATTAGATAGATATAACTATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTACAACCCTCAAAGGAATAATTTATTAGATAGATATAACTATTGA  200

seq1  TTGGTGAGTAGGGACAAGGCAAATGAGTGAATAAATTAGAGACTAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAGTAGGGACAAGGCAAATGAGTGAATAAATTAGAGACTAATGAA  250

seq1  GGCAAGAATCCAGAGGCCCAAAGAGGGAGGGTGGGCGGGATGACCAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAATCCAGAGGCCCAAAGAGGGAGGGTGGGCGGGATGACCAAATG  300

seq1  AACCCCACAGCCTCAGTGATCTTAACCGTCTATTATTTTGTCATTTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCACAGCCTCAGTGATCTTAACCGTCTATTATTTTGTCATTTGATG  350

seq1  GAGTTGAATGTACCGCCTCAAAGGCTTTTTAATTATTAACTTCAGGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAATGTACCGCCTCAAAGGCTTTTTAATTATTAACTTCAGGAGTG  400

seq1  AAATTTGCATTCACATATATATTAATAAATTCCTTATGGTAATTATGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGCATTCACATATATATTAATAAATTCCTTATGGTAATTATGCCA  450

seq1  AAATTAACACAGATTAAAAAATAGAAACATTAACTCCCTATGACCAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAACACAGATTAAAAAATAGAAACATTAACTCCCTATGACCAAAAC  500

seq1  AACCAGAAGAACTCGGGAAAAGTCCTTCTTTAAAGCAGGAGGCTAACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAAGAACTCGGGAAAAGTCCTTCTTTAAAGCAGGAGGCTAACCTC  550

seq1  TAAGTGAACTGCCCCAGCAGCGCCACACAGATTAAAAGGCCAGTAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGAACTGCCCCAGCAGCGCCACACAGATTAAAAGGCCAGTAAAACA  600

seq1  AAAGCAACCAATGTGACAATTTTTTATGTAAGTATAATTTTATTCCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACCAATGTGACAATTTTTTATGTAAGTATAATTTTATTCCAGAT  650

seq1  AGGCAACAATTCCTTCTGAAAATGAAATGACTTCAAAAATCTAGCAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACAATTCCTTCTGAAAATGAAATGACTTCAAAAATCTAGCAAAGG  700

seq1  AGCCAGTAATGACTGCAAAGCCTCTCATATTTCTTTTAAGAAATTAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTAATGACTGCAAAGCCTCTCATATTTCTTTTAAGAAATTAAATT  750

seq1  AAATCGTTTTTCATTTTGATGGAGAGAACAGAGAGGAAAATGCCCTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCGTTTTTCATTTTGATGGAGAGAACAGAGAGGAAAATGCCCTGAAA  800

seq1  ACATGAACATTTTGGAGTTTTGGAAACAGGAAGCAAGGACTATCTTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAACATTTTGGAGTTTTGGAAACAGGAAGCAAGGACTATCTTCTCT  850

seq1  TCTACTCAGATTTGCTCCCCAGGTGCAGCTCTGTCATTATAGAGCATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCAGATTTGCTCCCCAGGTGCAGCTCTGTCATTATAGAGCATATG  900

seq1  TATGGTTTTATGGCTTTTGTAAACCCATGAATTCCAGGGTTGGTGACAGA  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TATGGTTTTATGGCTTTTGTAAACCCATGAATTCCAGGGTT-GTGACAGA  949

seq1  GAAACTAAACTGCTTTTAACAATAGTGACATGACCAGTGACTTCAGATAG  1000
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  GAAACTAAACTGCTTTTA--CATAGTGACATGACCAGTGACTTCAGATAG  997

seq1  TATATGCCAGGCTGCATAAAATAGATCATAATATTGTCAAATTAGATATT  1050
      ||||||||| ||||||||||||||||||| ||||||||||| |||| | |
seq2  TATATGCCA-GCTGCATAAAATAGATCAT-ATATTGTCAAA-TAGA-AAT  1043

seq1  AGCACCGAAGCTTCCATGTATGTAAATATTAATGGAAATGGCAGCCTTCA  1100
      |||||||| |||  |||||||||||||||| |||  ||| |||||  |||
seq2  AGCACCGAGGCT--CATGTATGTAAATATT-ATG--AAT-GCAGC--TCA  1085

seq1  TGAACAGATGCATGGTGGCGGTTGTGCAAATCAACTTAGAAACTTAAGAA  1150
      || ||||||||||| ||   | ||||| | || |||| |  || | ||||
seq2  TG-ACAGATGCATGCTG--CGCTGTGC-ATTCCACTTGG--ACCTTAGAA  1129

seq1  TTGAAGAAGAGATTAGCATGATGCA-TCTG  1179
      ||| |||   || |||||||||||| ||||
seq2  TTG-AGA--GGACTAGCATGATGCACTCTG  1156


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