BAC Information

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BAC

Clone NameB6Ng01-310N10
Chromosome18 (Build37)
Map Location 27,017,128 - 27,018,264
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041263, LOC100041274
Downstream geneEG665977, EG665646
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310N10.bB6Ng01-310N10.g
ACCGA102709GA102710
length1,1281,128
definitionB6Ng01-310N10.b B6Ng01-310N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcatggattctcttccatatttttgcttgagtgttttatcata
tacagaaaaagaaccagagaagagtagtacacagttagatattatttctt
tttttgtaaaacatcattgatcatatgtaagtatttactttatagttcat
tttttgtacatgcattattatgtgtgtggggaaatgggggacctacttca
tgtaactgcatatagtaattagtgctctgattttctagttgattgaaaaa
ttgcagataacaatgcctggaaatatattagagagaacttactgttttgc
ataaatttaaaactttgtaaggaataaatttagttttaggagtttgtcat
ttttcgattcttacatagaagcagttgctaaagactgctgtctgctgtac
cagaaaacttcaagagctgtgcccagttacccatacaaaacaagcctgaa
gaggccatcacttttagccaggtagtactcccagtggagtgataagtata
ccaacctacccacaatacttttgattctagatttccattctgtctaaaag
aaatgcaagtaaaaagatggagcagaaactgagggaataaccaacaaata
accagctctacttaagacctatccaatgggtaagcactactccctgacac
tattaatgatactctgttctgcatatcattaactgtccttcaagatgctt
cacctagcacctgacctagacagaagcagacacacctacaaacaatcatt
ggaaggagcttgctgactcctatggaagatttgggggaaggattgagtgc
cctgaaggggacaggaactccacaggaaaaccaatagaatcaactaacat
ggaccgttgagggctctcagagactgtacagcctaagattacccacaggc
tagacctgtgagcaatgtgcaggttaatctctatttgggtcccccaccaa
ctggatcaggattctctcaaaactgtggcctgtctgtggatctacagcaa
atagctgtctgtttggctcaatgagagagatagcctacttgaagagacta
tatgctggtgtcaagctgtacttcctagaaaaaggaaggtctctgtgatg
tggagggtgttactgggagattggtaac

gaattccaagaacttagagacttcctactaggaacctgcaacaaaagaaa
aaagtcattatttttactgaaattaaaagaaagagagaaaacagaatcct
gtaatcccaaatccacttctatgtcagctcaaacaaacaaacaaacaatg
tgcacatactagctgagtgaattttcctctaccaggacccaaggacttaa
atttgcaaatgaagacatcttttgcactgcagtgaacttactggagtaag
ctttttgtgtgtccattatattttcacacttcatttgttcttggttggat
tttcacaaagataccaagatactggtgggttgagagagacctgggaaact
ccagatatcttcttgtttgtctaaagtgaaaaggaacttaaagtaaagtt
aaaaatgtgcacgatttaaatctgggctttattatcttagaggactgagt
ttgtgcctcaaatgtaggatttaaggtcaaactcaccttttctgtgtttc
tgcccctcttctttaaagtggggtacagtgatggttctgtcctgctgcag
ataaacaagatgtcatatgatgccatgtgaggcatgtagaaaattattta
tggaatatgcaagacaataacctatcagtagttgctaggaatttgctttt
tattgatagttcagaaaccatccagtaaactgagttctaacgctaccatt
gaaaataaagaaatttggttattttgtgttcttgttgttgatgggcaacc
actatactgatatattttttttaattgtttgtttgtttgtttgttgacaa
aggtagggtgatgttcacatcttgctcaaagtctgagttactcaaccttt
gagacactgtgtcaaagcagggtatctggaaagccctgtcttgttttggt
tttctttcacagacatgaaatcccctgaatgagacaactcaaatgaaaca
gctgtgcatgaattttcattttgaaactttcaaatgtttcaattttcagt
ttatgatttttctttatagctcctaccatagtaagctaccagcctcattc
ttttcttggtgtgaaggcagtactttctacctgagaagtttaggaatcag
tcatctaaccgtactcatctctgttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27017128_27018264
seq2: B6Ng01-310N10.g_66_1193

seq1  GAATTCCAAGAACTTAGAGACTTCCTACTAGGAACCTGCAACAAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAACTTAGAGACTTCCTACTAGGAACCTGCAACAAAAGAAA  50

seq1  AAAGTCATTATTTTTACTGAAATTAAAAGAAAGAGAGAAAACAGAATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATTATTTTTACTGAAATTAAAAGAAAGAGAGAAAACAGAATCCT  100

seq1  GTAATCCCAAATCCACTTCTATGTCAGCTCAAACAAACAAACAAACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCCAAATCCACTTCTATGTCAGCTCAAACAAACAAACAAACAATG  150

seq1  TGCACATACTAGCTGAGTGAATTTTCCTCTACCAGGACCCAAGGACTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATACTAGCTGAGTGAATTTTCCTCTACCAGGACCCAAGGACTTAA  200

seq1  ATTTGCAAATGAAGACATCTTTTGCACTGCAGTGAACTTACTGGAGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAAATGAAGACATCTTTTGCACTGCAGTGAACTTACTGGAGTAAG  250

seq1  CTTTTTGTGTGTCCATTATATTTTCACACTTCATTTGTTCTTGGTTGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTGTGTCCATTATATTTTCACACTTCATTTGTTCTTGGTTGGAT  300

seq1  TTTCACAAAGATACCAAGATACTGGTGGGTTGAGAGAGACCTGGGAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAAAGATACCAAGATACTGGTGGGTTGAGAGAGACCTGGGAAACT  350

seq1  CCAGATATCTTCTTGTTTGTCTAAAGTGAAAAGGAACTTAAAGTAAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATATCTTCTTGTTTGTCTAAAGTGAAAAGGAACTTAAAGTAAAGTT  400

seq1  AAAAATGTGCACGATTTAAATCTGGGCTTTATTATCTTAGAGGACTGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTGCACGATTTAAATCTGGGCTTTATTATCTTAGAGGACTGAGT  450

seq1  TTGTGCCTCAAATGTAGGATTTAAGGTCAAACTCACCTTTTCTGTGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTCAAATGTAGGATTTAAGGTCAAACTCACCTTTTCTGTGTTTC  500

seq1  TGCCCCTCTTCTTTAAAGTGGGGTACAGTGATGGTTCTGTCCTGCTGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTCTTCTTTAAAGTGGGGTACAGTGATGGTTCTGTCCTGCTGCAG  550

seq1  ATAAACAAGATGTCATATGATGCCATGTGAGGCATGTAGAAAATTATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAGATGTCATATGATGCCATGTGAGGCATGTAGAAAATTATTTA  600

seq1  TGGAATATGCAAGACAATAACCTATCAGTAGTTGCTAGGAATTTGCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATGCAAGACAATAACCTATCAGTAGTTGCTAGGAATTTGCTTTT  650

seq1  TATTGATAGTTCAGAAACCATCCAGTAAACTGAGTTCTAACGCTACCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATAGTTCAGAAACCATCCAGTAAACTGAGTTCTAACGCTACCATT  700

seq1  GAAAATAAAGAAATTTGGTTATTTTGTGTTCTTGTTGTTGATGGGCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAGAAATTTGGTTATTTTGTGTTCTTGTTGTTGATGGGCAACC  750

seq1  ACTATACTGATATA-TTTTTTTAATTGTTTGTTTGTTTGTTTGTTGACAA  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACTATACTGATATATTTTTTTTAATTGTTTGTTTGTTTGTTTGTTGACAA  800

seq1  AGGTAGGGTGATGTTCACATCTTGCTCAAAGTCTGAGTTACTCAACC-TT  848
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGGTAGGGTGATGTTCACATCTTGCTCAAAGTCTGAGTTACTCAACCTTT  850

seq1  GAGACACTGTGTCAAAGCAGGGTATCTGGAAAGCCCTGTCTTGTTTTGGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACTGTGTCAAAGCAGGGTATCTGGAAAGCCCTGTCTTGTTTTGGT  900

seq1  TTTCTTTCACAGACATGAAATCCCCTGAATGAGACAACTCAAAATGAAAC  948
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTCTTTCACAGACATGAAATCCCCTGAATGAGACAACTC-AAATGAAAC  949

seq1  AGCTGTGCATGAATTTTTCATTTTGGAAACTTTCAAATGTTTCAATTTTC  998
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  AGCTGTGCATGAA-TTTTCATTTT-GAAACTTTCAAATGTTTCAATTTTC  997

seq1  AGTTTATGATTTTTCTTTATAGCTCCTTACCATAGTAAAGCTACACAGCC  1048
      |||||||||||||||||||||||||| ||||||||| ||||||| |||||
seq2  AGTTTATGATTTTTCTTTATAGCTCC-TACCATAGT-AAGCTAC-CAGCC  1044

seq1  TCA-TCTTTTCCT-GTGTGAAAGGCAGTACCTTTCTTTAAACTTAAAAAA  1096
      ||| ||||||| | ||||| ||||||||| ||||||    || |  | ||
seq2  TCATTCTTTTCTTGGTGTG-AAGGCAGTA-CTTTCT----ACCT-GAGAA  1087

seq1  TTTTAGGAATCAGTCATCTAACCATAACTTCA--TCTGTTGTT  1137
       |||||||||||||||||||||| ||   |||  |||||||||
seq2  GTTTAGGAATCAGTCATCTAACCGTA--CTCATCTCTGTTGTT  1128


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