BAC Information

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BAC

Clone NameB6Ng01-311F21
Chromosome18 (Build37)
Map Location 58,929,355 - 58,930,515
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc12a2, 9330166H04Rik, Fbn2, Slc27a6, Isoc1
Downstream geneAdamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311F21.bB6Ng01-311F21.g
ACCGA103102GA103103
length1,1791,152
definitionB6Ng01-311F21.b B6Ng01-311F21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtaaatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
tggaggagctagagaagtacccagagctaaagggatcttcaccctatagg
tggacacatatgactacagtaccctgagctctgactctagctgcatatgt
atcaaagatgcctagtcggccattcactgaaagagaggcccatggacacg
cgacctttgtgtgcccggttacacgtaatgctaggctaggggtaatgggt
tgcttagcatctctctgacatagtggcat
gaattcacctttaaaaattgagttaaagaggcatttttcctcttttcctt
ccatttgggtttaattaagacataactactataaagagaaagccagaggg
aacagccataggtaatccccatcagcatctatcatgccccagctcctgac
agtgccagtcttctgcaagatttgaaccacagcaggtggggcttccccag
ctccttctcacttcttgtttcgacacactcagcatcagtctctcacagaa
gtgtttttctttgtgtttatggtgaattcatttcgaacactgttgtaatc
aacacccatgaatacttcaataatatggtacaactcagaggtagacccat
agataagggcagttgtgtatgcataatgctctgctttaaaaaaatatata
attatattctatatattctagatacaattatatataaatttatatataat
aataacatttcttccctccatgcccttcctccataccctctcatatacct
ctccttgatctctttcaaattcatgccctcttttgtggtaataattatta
tatgcatatatatatatatatatatatatatttcgtagtgtaatgaaaat
ctttttcttcttaaatgagaaaatcaaattattgaagacaatgtgttgat
ttaaagaggtatatatggtgctttgaagttcataattatgactgtaataa
ctacatcctgttatttttctcctcagtgtaaaaacaattttatattgcaa
tatttcatatgcactgtgggacatttaaaaccacatccacaatctattcc
acattcctttcaaatgatgctccctaattcctgcaacttcaacatgggct
acaacttggggacctgccttttgacaaatagaggatactgagtttaagga
tttggttaaagaaaggggtgttttttcattgttccctccacatcctcact
cactacagacagtctgccatactgttactatgctatgagaagacttaccc
gaaagactgaagcttcagtcggctgtgaggagctgagctggcaataaccc
gggtcagtgagctcagaacatgaagcctctagctttcacaaatatggata
gttatgccatgacgtagccattagatcctgaaccaggaaccacttgcctt
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58929355_58930515
seq2: B6Ng01-311F21.g_64_1215

seq1  GAATTCACCTTTAAAAATTGAGTTAAAGAGGCATTTTTCCTCTTTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTTAAAAATTGAGTTAAAGAGGCATTTTTCCTCTTTTCCTT  50

seq1  CCATTTGGGTTTAATTAAGACATAACTACTATAAAGAGAAAGCCAGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGGTTTAATTAAGACATAACTACTATAAAGAGAAAGCCAGAGGG  100

seq1  AACAGCCATAGGTAATCCCCATCAGCATCTATCATGCCCCAGCTCCTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCATAGGTAATCCCCATCAGCATCTATCATGCCCCAGCTCCTGAC  150

seq1  AGTGCCAGTCTTCTGCAAGATTTGAACCACAGCAGGTGGGGCTTCCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGTCTTCTGCAAGATTTGAACCACAGCAGGTGGGGCTTCCCCAG  200

seq1  CTCCTTCTCACTTCTTGTTTCGACACACTCAGCATCAGTCTCTCACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCACTTCTTGTTTCGACACACTCAGCATCAGTCTCTCACAGAA  250

seq1  GTGTTTTTCTTTGTGTTTATGGTGAATTCATTTCGAACACTGTTGTAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTCTTTGTGTTTATGGTGAATTCATTTCGAACACTGTTGTAATC  300

seq1  AACACCCATGAATACTTCAATAATATGGTACAACTCAGAGGTAGACCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCATGAATACTTCAATAATATGGTACAACTCAGAGGTAGACCCAT  350

seq1  AGATAAGGGCAGTTGTGTATGCATAATGCTCTGCTTTAAAAAAATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGGGCAGTTGTGTATGCATAATGCTCTGCTTTAAAAAAATATATA  400

seq1  ATTATATTCTATATATTCTAGATACAATTATATATAAATTTATATATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTCTATATATTCTAGATACAATTATATATAAATTTATATATAAT  450

seq1  AATAACATTTCTTCCCTCCATGCCCTTCCTCCATACCCTCTCATATACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATTTCTTCCCTCCATGCCCTTCCTCCATACCCTCTCATATACCT  500

seq1  CTCCTTGATCTCTTTCAAATTCATGCCCTCTTTTGTGGTAATAATTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGATCTCTTTCAAATTCATGCCCTCTTTTGTGGTAATAATTATTA  550

seq1  TATGCATATATATATATATATATATATATATTTCGTAGTGTAATGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATATATATATATATATATATATATATTTCGTAGTGTAATGAAAAT  600

seq1  CTTTTTCTTCTTAAATGAGAAAATCAAATTATTGAAGACAATGTGTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTCTTAAATGAGAAAATCAAATTATTGAAGACAATGTGTTGAT  650

seq1  TTAAAGAGGTATATATGGTGCTTTGAAGTTCATAATTATGACTGTAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGGTATATATGGTGCTTTGAAGTTCATAATTATGACTGTAATAA  700

seq1  CTACATCCTGTTATTTTTCTCCTCAGTGTAAAAACAATTTTATATTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCCTGTTATTTTTCTCCTCAGTGTAAAAACAATTTTATATTGCAA  750

seq1  TATTTCATATGCACTGTGGGACATTTAAAACCACATCCACAATCTATTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATATGCACTGTGGGACATTTAAAACCACATCCACAATCTATTCC  800

seq1  ACATTCCTTTCAAATGATGCTCCCTAATTCCTGC-ACTTCAACATGGGCT  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACATTCCTTTCAAATGATGCTCCCTAATTCCTGCAACTTCAACATGGGCT  850

seq1  ACAACTTGGGGACCTGCCTTTTGACAAATAGAGGATACTGAGTTTAAGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGGGGACCTGCCTTTTGACAAATAGAGGATACTGAGTTTAAGGA  900

seq1  TTTGGTTAAAGAAAGGGGTG-TTTTTCATTGTTCCCTCCACATCCTCACT  948
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTGGTTAAAGAAAGGGGTGTTTTTTCATTGTTCCCTCCACATCCTCACT  950

seq1  CACTACAGGACAGTCTGCCATACTGTTAACTATGCTATGAGAAGACTTAC  998
      ||||||| ||||||||||||||||||| ||||||||||||||||||||||
seq2  CACTACA-GACAGTCTGCCATACTGTT-ACTATGCTATGAGAAGACTTAC  998

seq1  CCGAAAGGAACTGAAGCTTCAGTCCGGCTGTGAGGAGCTGAAGCCTGCCA  1048
      |||||||  |||||||||||||| |||||||||||||||||   ||| ||
seq2  CCGAAAG--ACTGAAGCTTCAGT-CGGCTGTGAGGAGCTGA--GCTGGCA  1043

seq1  ATAACCC-GGTCAGTGAGCTCAG-ACATGAAGCTCTTAGCTTCCAACAAA  1096
      ||||||| ||||||||||||||| |||||||||   |||||| | |||||
seq2  ATAACCCGGGTCAGTGAGCTCAGAACATGAAGCCTCTAGCTTTC-ACAAA  1092

seq1  TATTGTGATGTTATGGCCATGACAGTAGCCAAATAAAGATCCTG-ACCAA  1145
      ||| |  | ||||| |||||||| |||||||     |||||||| |||| 
seq2  TATGGATA-GTTAT-GCCATGAC-GTAGCCA---TTAGATCCTGAACCAG  1136

seq1  GAACCACTTGGCTTAA  1161
      |||||||||| |||||
seq2  GAACCACTTGCCTTAA  1152