BAC Information

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BAC

Clone NameB6Ng01-311K18
Chromosome18 (Build37)
Map Location 64,122,424 - 64,123,413
singlet/doubletsinglet
Overlap geneWdr7
Upstream geneNapg, 9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1
Downstream geneLOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311K18.bB6Ng01-311K18.g
ACCGA103332GA103333
length2721,001
definitionB6Ng01-311K18.b B6Ng01-311K18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cacagcagagcaagaggagagaggagagaggagagaggagagaggagaga
ggagagaggagagaggagagaggagagaggagagaggagagaggagagag
gatagaggattcctgagtgggttgttatccgctcacatttccacacaaca
tacgagccggaagcatatattgttaagcctggggtgcctttttgagtgtt
ctaacttcctttaattgcgttgcgctcactgccctctttcctgtcgggaa
acctgtcgtgccagcttcctta
gaattcctttaaggaaagatgacttggcagaacagaatccttttcagcca
gttagacatccaagggtgcgtacagtgactgggaaagtctttgtgaagag
taaaaacacaaaaattataaaaattatttgcatatacatctttcttaagg
aatagtattttgtggacgtgaatattacttaagtggccattttaacgggg
aaataaatgagaatcttctgtttctaaattaagactgtctttaaaaattt
agaaatattgaaaatttgaaacattacaggccttattttttttattgttc
caagttcttggtagtatagtacagcacttaataactgaagaaagtaagat
tgtagcaacatttcccaactagcagtatacattttgtgtcatatagaatc
catctcatgctttctggtgtctgaagctctcctcttgcataagttatctc
taagaatattcataagaccttattttaagaaacataacatttatagaaaa
ttttagtaaaacaatattcttgatttgaaaattaatagcaaatgatagca
agtcccacatcttctaagggccatagaatctagctggttgggttgttgtt
ccccgccgttgttgttttctgtacaggagaagaaacccagtgaaggcttt
agaattgcaaggaagatgtttttaattgaaaaatgtagaaaaataactct
taggtagagttactagagatcaatattttacttaataagtaaaattagga
gacaatgtatctaaaatagtaataatgggattatatgttaaagtaggttt
ggaaagaaagaagcctacagggccctccagccctccagctgctcatcctg
aggtgatgcaaattaatgagaaaggaaaggaaagctgtccgctaccttcc
attggcctgggcctggtgttaactgagccatcagaacattgaaccaatgg
cctagaaaaatagctcatggaaaaaagaatgatggcccagaaaatagtaa
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_64122424_64123413
seq2: B6Ng01-311K18.g_68_1068

seq1  GAATTCCTTTAAGGAAAGATGACTTGGCAGAACAGAATCCTTTTCAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAAGGAAAGATGACTTGGCAGAACAGAATCCTTTTCAGCCA  50

seq1  GTTAGACATCCAAGGGTGCGTACAGTGACTGGGAAAGTCTTTGTGAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGACATCCAAGGGTGCGTACAGTGACTGGGAAAGTCTTTGTGAAGAG  100

seq1  TAAAAACACAAAAATTATAAAAATTATTTGCATATACATCTTTCTTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACACAAAAATTATAAAAATTATTTGCATATACATCTTTCTTAAGG  150

seq1  AATAGTATTTTGTGGACGTGAATATTACTTAAGTGGCCATTTTAACGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATTTTGTGGACGTGAATATTACTTAAGTGGCCATTTTAACGGGG  200

seq1  AAATAAATGAGAATCTTCTGTTTCTAAATTAAGACTGTCTTTAAAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGAGAATCTTCTGTTTCTAAATTAAGACTGTCTTTAAAAATTT  250

seq1  AGAAATATTGAAAATTTGAAACATTACAGGCCTTATTTTTTTTATTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATTGAAAATTTGAAACATTACAGGCCTTATTTTTTTTATTGTTC  300

seq1  CAAGTTCTTGGTAGTATAGTACAGCACTTAATAACTGAAGAAAGTAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTTGGTAGTATAGTACAGCACTTAATAACTGAAGAAAGTAAGAT  350

seq1  TGTAGCAACATTTCCCAACTAGCAGTATACATTTTGTGTCATATAGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAACATTTCCCAACTAGCAGTATACATTTTGTGTCATATAGAATC  400

seq1  CATCTCATGCTTTCTGGTGTCTGAAGCTCTCCTCTTGCATAAGTTATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATGCTTTCTGGTGTCTGAAGCTCTCCTCTTGCATAAGTTATCTC  450

seq1  TAAGAATATTCATAAGACCTTATTTTAAGAAACATAACATTTATAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATATTCATAAGACCTTATTTTAAGAAACATAACATTTATAGAAAA  500

seq1  TTTTAGTAAAACAATATTCTTGATTTGAAAATTAATAGCAAATGATAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTAAAACAATATTCTTGATTTGAAAATTAATAGCAAATGATAGCA  550

seq1  AGTCCCACATCTTCTAAGGGCCATAGAATCTAGCTGGTTGGGTTGTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCACATCTTCTAAGGGCCATAGAATCTAGCTGGTTGGGTTGTTGTT  600

seq1  -GTTGTTGTTGTTGTTTTCTGTACAGGAGAAGAAACCCAGTGAAGGCTTT  649
          |  |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCCGTTGTTGTTTTCTGTACAGGAGAAGAAACCCAGTGAAGGCTTT  650

seq1  AGAATTGCAAGGAAGATGTTTTTAATTGAAAAATGTAGAAAAATAACTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGCAAGGAAGATGTTTTTAATTGAAAAATGTAGAAAAATAACTCT  700

seq1  TAGGTAGAGTTACTAGAGATCAATATTTTACTTAATAAGTAAAATTAGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGAGTTACTAGAGATCAATATTTTACTTAATAAGTAAAATTAGGA  750

seq1  GACAATGTATCTAAAATAGTAATAAT-GGATTATATGTTAAAGTAGGTTT  798
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACAATGTATCTAAAATAGTAATAATGGGATTATATGTTAAAGTAGGTTT  800

seq1  -GAAAGAAAGAAGCCTACAGGGCCCTCCAGCCCTCCAGCTGCTCATCCTG  847
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAAGAAGCCTACAGGGCCCTCCAGCCCTCCAGCTGCTCATCCTG  850

seq1  AGGTGATGCAAATTAATGAGAAAGG-AAGGAAAGCTGTCCGCTACCTTCC  896
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGTGATGCAAATTAATGAGAAAGGAAAGGAAAGCTGTCCGCTACCTTCC  900

seq1  A-TGGGCTTGGCCT-GTGTTAACTGAGCCATCAAGACATTGAA-CAATGG  943
      | ||| || ||||| ||||||||||||||||||  |||||||| ||||||
seq2  ATTGGCCTGGGCCTGGTGTTAACTGAGCCATCAGAACATTGAACCAATGG  950

seq1  -CTAGAAAAATAGCTCA--GGAAAAAGAATGATGG-CCAGAAAATAGTAA  989
       ||||||||||||||||  | |||||||||||||| ||||||||||||||
seq2  CCTAGAAAAATAGCTCATGGAAAAAAGAATGATGGCCCAGAAAATAGTAA  1000

seq1  T  990
      |
seq2  T  1001