BAC Information

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BAC

Clone NameB6Ng01-312M04
Chromosome18 (Build37)
Map Location 7,263,111 - 7,264,043
singlet/doubletsinglet
Overlap geneArmc4
Upstream geneEG621100, LOC665028, EG622152, Epc1, LOC665047, 4921524L21Rik, LOC100039583, EG665053, Rab18, LOC620787, LOC100039635, Mkx, LOC664778
Downstream geneMpp7, EG622384, LOC100039562, LOC100039606, Wac, LOC665121, LOC225134, LOC665132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312M04.bB6Ng01-312M04.g
ACCGA104151GA104152
length1,175948
definitionB6Ng01-312M04.b B6Ng01-312M04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttttaatggggatatttgtt
tttctggagtccattttcttgagttctttatatatattggatattagtcc
cctatctgatttaggataggtaaagatcctttcccagtctgttgatggcc
tttttgtcttattgacagtgtcttttgccttgcagaagctttgcaatttt
attaggtcccatttgtagattctcgatcttacagcacaagccattgctgt
tctattcaggaatttttcccctgtacccatatcttcgagggttttcccta
ctttctcctcaataagtttcagtgtctacggataataggagtagatgaga
atgaagaatttcaactcaaagtaccagcaaatatcttcaacaaaattata
gaagaaaacttcccaaacctaaagaaagagatgcccatgaacatacaaga
agcctacagaactccaaatagactggaccagaaaagaaattcctcctgat
acataataatcagaacaacaaatgcactaaataaagatagaatattaaaa
gcagtaagggaaaagggtcaagtaacatataaaggcaagcctatcagaat
tacaccagatttttcaccagagactatgaaagcaagaagagtttggacag
atgttatacagacactaagagaacacaaatgccaaccagggtactatacc
cagccaaactttcaataaccttagatggagaaaccaatgtattccacgac
agaaccaaattcacaaattatctttccacgaatccagcccttcaaaggat
aataacagaaaaaaaaaacaatacaaggatggaaaccatgtcctagaaaa
agcaagaaaggtaccccctcaacaaacctaaaataagacagccacaagaa
cagaatgcccaacttcgatttctttcttgagacttgaagttattgtcata
cagatctttcacttcctttagttagagttaccccaagatattttatatta
tttgtgactatgtgaagtgaaattgtttctttttctcagccctggttatc
ctttggtatttaacgaattgcgactgattgcttgagtaattttaatatcc
tgcacttgctggagttgtttatcagcttgagagtctctggatagactttg
gggtccactttgtggctatatccat
gaattccttctaaccagtaacgtcatcatgattcacatcagaggagactg
agaacccgaattcccaaaagagaattaaaatacatttcacaatgtcttca
ctaatttgagaccatccattcagagggcctttgtcagattctcaaatcac
gcacaaaagctgttttatatgctatcttgaggtgaggaggcaatagcctt
ggccaatctggccaaagatatgggaaaaaagaagaaatataaggtagtca
aaatattttgtcccatttttttcacctatagttttggacttcagctttaa
agaaggctttaccagagcagcaagaaatgtcaatttgggctgcagcattt
tccttggcccttcctccattcaaatatttatatacttcttatgggctact
catcatgtaaggtattttcatgtctcttctgactagagacatggaagtga
gccgtatcttttttttcaattttttattagatattttctttatttacatt
tcaaatgctatcccgaaaagcccctataccctccccctcctctgttcccc
aacccacccactcctgcttcctggccctggcattcccctgtactggggca
tataatatttgtaagaccaaggacctctcctcccattgatggtcaactag
gccatcctctgctacatatgcaactagagacacaaacttatagaggagaa
agtgggggaaagcctcaaagatatgggcacagggggaaaattcctgaaca
gaatagcaatggcttgtactgtcagatcaagaatcgacaaatgggacctc
ataaaattgcaaagcttctgtaaaggcaaaagacactgtcaataagacag
aagcccaccaacagattgggaaaggatatttaccaatcctaaactgatag
gggactaatattccatatatacaaagaactcagagctgactcagaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_7263111_7264043
seq2: B6Ng01-312M04.g_65_996

seq1  GAATTCCTTCTAACCAGTAACGTCATCATGATTCACATCAGAGGAGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTAACCAGTAACGTCATCATGATTCACATCAGAGGAGACTG  50

seq1  AGAACCCGAATTCCCAAAAGAGAATTAAAATACATTTCACAATGTCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCGAATTCCCAAAAGAGAATTAAAATACATTTCACAATGTCTTCA  100

seq1  CTAATTTGAGACCATCCATTCAGAGGGCCTTTGTCAGATTCTCAAATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTGAGACCATCCATTCAGAGGGCCTTTGTCAGATTCTCAAATCAC  150

seq1  GCACAAAAGCTGTTTTATATGCTATCTTGAGGTGAGGAGGCAATAGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAAGCTGTTTTATATGCTATCTTGAGGTGAGGAGGCAATAGCCTT  200

seq1  GGCCAATCTGGCCAAAGATATGGGAAAAAAGAAGAAATATAAGGTAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATCTGGCCAAAGATATGGGAAAAAAGAAGAAATATAAGGTAGTCA  250

seq1  AAATATTTTGTCCCATTTTTTTCACCTATAGTTTTGGACTTCAGCTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTGTCCCATTTTTTTCACCTATAGTTTTGGACTTCAGCTTTAA  300

seq1  AGAAGGCTTTACCAGAGCAGCAAGAAATGTCAATTTGGGCTGCAGCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTTTACCAGAGCAGCAAGAAATGTCAATTTGGGCTGCAGCATTT  350

seq1  TCCTTGGCCCTTCCTCCATTCAAATATTTATATACTTCTTATGGGCTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGCCCTTCCTCCATTCAAATATTTATATACTTCTTATGGGCTACT  400

seq1  CATCATGTAAGGTATTTTCATGTCTCTTCTGACTAGAGACATGGAAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGTAAGGTATTTTCATGTCTCTTCTGACTAGAGACATGGAAGTGA  450

seq1  GCCGTATCTTTTTTTTCAATTTTTTATTAGATATTTTCTTTATTTACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTATCTTTTTTTTCAATTTTTTATTAGATATTTTCTTTATTTACATT  500

seq1  TCAAATGCTATCCCGAAAAGCCCCTATACCCTCCCCCTCCTCTGTTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGCTATCCCGAAAAGCCCCTATACCCTCCCCCTCCTCTGTTCCCC  550

seq1  AACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTACTGGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTACTGGGGCA  600

seq1  TATAATATTTGTAAGACCAAGGACCTCTCCTCCCATTGATGGTCAACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTTGTAAGACCAAGGACCTCTCCTCCCATTGATGGTCAACTAG  650

seq1  GCCATCCTCTGCTACATATGCAACTAGAGACACAAACTTATAGAGGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCTCTGCTACATATGCAACTAGAGACACAAACTTATAGAGGAGAA  700

seq1  AGTGGGGGAAAGCCTCAAAGATATGGGCACAGGGGGAAAATTCCTGAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGGAAAGCCTCAAAGATATGGGCACAGGGGGAAAATTCCTGAACA  750

seq1  GAATAGCAATGGCTTGTACTGTCAGATCAAGAATCGACAAATGGGACCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCAATGGCTTGTACTGTCAGATCAAGAATCGACAAATGGGACCTC  800

seq1  ATAAAATTGCAAAGCTTCTGT-AAGGCAAAAGACACTGTCAATAAGACAA  849
      ||||||||||||||||||||| |||||||||||||||||||||||||| |
seq2  ATAAAATTGCAAAGCTTCTGTAAAGGCAAAAGACACTGTCAATAAGAC-A  849

seq1  GAAGCCCACCAACAGATTGGGAAAGGATATTTACCAATCCTAAAACTGAT  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAAGCCCACCAACAGATTGGGAAAGGATATTTACCAATCCT-AAACTGAT  898

seq1  AGGGGACTAATATCCAATATATACAAAGAACTCA  933
      ||||||||||||| | ||||||||||||||||||
seq2  AGGGGACTAATATTCCATATATACAAAGAACTCA  932