BAC Information

Click to search

BAC

Clone NameB6Ng01-315A15
Chromosome18 (Build37)
Map Location 3,000,505 - 3,001,039
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC664794, Crem, EG621440, Cul2, EG621501, Bambi, LOC100039273, LOC435549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315A15.bB6Ng01-315A15.g
ACCGA105797GA105798
length895994
definitionB6Ng01-315A15.b B6Ng01-315A15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgtgctcagactctataatatctgtatttatatcttcagtga
aatacagtgtagactggtaccagaaagtctattattaacttccctttccc
tagcccacggttaatataaagggaggaatattccacttgataagtaggtt
tggaacattgttattgctatcacttgtgtgcttctctgcctctgtaattt
tcatattcatactctgaaatctgtaatttcggtcaaagttactggtggct
gaaagtttactgtactcaatttcagggtgcagctgtttgcacagaaaggc
gctgttatgctagattaaagtttcagaacttggtagagtgaggttgtaat
ctctcatgtatgaatgcatttctgtaacaggcatgcattaacttttacct
aagtactattgtgaggctcattaaaaaaaaaaaaaaaaaaaaacaggaaa
gattgtaagtccaaatcatgtcttccattttgctcttctgtatttcctga
ccacttagaaaaagttcacaagctgtgattgctgtaacttgcaatgtagt
gggcttaagtttgatttctgtaaactttttttccaattttttttcctttt
tatattttattttattttattttattttattttattttattttattttat
tttattttgagacagggtttctctgtatagccctggctgtcctggaactc
actttgcagaccaggctggccacaaactcagaaatcctcccatccctgcc
tccctagggctgggattaaagcttgagccaccactccccgatatttttta
attttttaattttttaattgtatttatttaattcatttttgttttttgtt
ttttttttcatgatgcagtttctctgtgtaacactggctgtccta
gaattctgcttcacaatgataggaagagccgacatcgaaggatcaaaaag
cgacgtcgctatgaacgcttggccgccacaagccagttatccctgtggta
acttttctgacacctcctgcttaaaacccaaaaggtcagaaggatcgtga
ggccccgctttcacggtctgtattcgtactgaaaatcaagatcaagcgag
cttttgcccttctgctccacgggaggtttctgtcctccctgagctcgcct
taggacacctgcgttaccgtttgacaggtgtaccgccccagtcaaactcc
ccacctggcactgtccccggagcgggtcgcgcccgcccgcacgcgcggga
cggacgcttggcgccagaagcgagagcccctcggggctcgcccccccgcc
tcaccgggtcagtgaaaaaacgatgagagtagtggtatttcaccggcggc
ccgcgaggccggcgtgccccgaccccgacgcgaggacggggccgggcgcc
gggggcctcccacttattctacacctctcatgtctcttcaccgtgccaga
ctagagtcaagctcaacagggtcttctttccccgctgattccgccaagcc
cgttcccttggctgtggtttcgctggatagtaggtagggacagtgggaat
ctcgttcatccattcatgcgcgtcactaattagatgacgaggcatttggc
taccttaagagagtcatagttactcccgccgtttacccgcgcttcattga
atttcttcactttgacattcagagcactgggcagaaatcacatcgcgtca
acacccgccgcgggccttcgcgatgctttgttttaattaaacagtcggat
tcctctggttccgcaccagttctaagtcgggctgctaggcgcccggccga
ggcgaggcgccgcgcggaaaaccgtcggtcccggggggcgggacctcggc
cggggaacactacgcggaggttctcccaacatcgcgggaaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_3000505_3001039
seq2: B6Ng01-315A15.b_45_567

seq1  GAATTCCTTGTGCTCAGACTCTAGAATATGTGTATTTATATCTTCAGTGA  50
      ||||||||||||||||||||||| ||||| ||||||||||||||||||||
seq2  GAATTCCTTGTGCTCAGACTCTATAATATCTGTATTTATATCTTCAGTGA  50

seq1  AATACAGTGTAGACTGGTACCAGAAAGTCTATTATTAACTTCCCTTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGTGTAGACTGGTACCAGAAAGTCTATTATTAACTTCCCTTTCCC  100

seq1  TAGCCCACGGTTAATATAAAGGGAGGAATATTCCACTTGATAAGTAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCACGGTTAATATAAAGGGAGGAATATTCCACTTGATAAGTAGGTT  150

seq1  TGGAGCATTGTTATTGCTATCACTTGTGTGCTTCCCTGCCTCTGTAATTT  200
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  TGGAACATTGTTATTGCTATCACTTGTGTGCTTCTCTGCCTCTGTAATTT  200

seq1  TCATATTCATACTCTGGAATCTGTAATTTCGGTAAAAGTTACTGGTGGCT  250
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  TCATATTCATACTCTGAAATCTGTAATTTCGGTCAAAGTTACTGGTGGCT  250

seq1  GAAAGTTTACTGTACTCAATTTCAGGGTGCAGCTGTTTGCACAGAAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTACTGTACTCAATTTCAGGGTGCAGCTGTTTGCACAGAAAGGC  300

seq1  ACTATTGTGCTAGATTAAAGTTTCAGAACTTGGTAGAGTGAGGTTGTAAT  350
       || || |||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTATGCTAGATTAAAGTTTCAGAACTTGGTAGAGTGAGGTTGTAAT  350

seq1  CTCTCATGTATGAATGCATTTCTTTAACAGGCATGCATTAACTTTTACAT  400
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  CTCTCATGTATGAATGCATTTCTGTAACAGGCATGCATTAACTTTTACCT  400

seq1  AAGTACTGTTGTGAAGCTCATTCATTAAAAAAAAAAAAACGAAAAACAAA  450
      ||||||| |||||| ||    ||||||||||||||||||        |||
seq2  AAGTACTATTGTGAGGC----TCATTAAAAAAAAAAAAA--------AAA  438

seq1  AAAAACAGGAAAGATTGTAAGTCCAAATCATGTCTTCCATTTTGCTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGGAAAGATTGTAAGTCCAAATCATGTCTTCCATTTTGCTCTTC  488

seq1  TGTATTTCCTGACCACTTAGAAAACGTTCACAAGC  535
      |||||||||||||||||||||||| ||||||||||
seq2  TGTATTTCCTGACCACTTAGAAAAAGTTCACAAGC  523