BAC Information

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BAC

Clone NameB6Ng01-316A08
Chromosome18 (Build37)
Map Location 49,079,953 - 49,081,012
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042301, EG433182, LOC383326, LOC100042323, LOC545470
Downstream geneDtwd2, Dmxl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316A08.bB6Ng01-316A08.g
ACCGA106520GA106521
length1,0261,059
definitionB6Ng01-316A08.b B6Ng01-316A08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttattcgatt
ttctggagtctaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttagtggtct
ttttgtgttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattctcgatcttacagcacaagccattgctgtt
ctattcaggaattttccccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccctaa
tccatagagcaattagacaacaaaaggagatcaaggggatacaaattgga
aaggaagaagtcaaaatatcactttttgcagatgatattatagtatatat
aaatgaccctaaaaattccacccgagaactcctaagcctgataaacagct
tcaatgaagtagctggatataaaattaactcaaacaagtcaatggccttt
ctgtacacaaaggataaacaggctgagaaagaaattagggaaacaacacc
cttctcaatagtcacaaataatataaaataccttggcatgactctaacta
aggaagtgaaagatctgtatgataagaacttcaagtctctgaagaacgaa
attaaagaagatctcagaagatggaaagatatcccatgctcatggattgg
caggatcaatatagtaaaaatggctatcttttattctttaatctaaaact
tacagtattcttactctgcctttggactcctgttgcctaccctgttatgt
gctttgctgtgttgtgtctgagatatagattaagttctgttaatagacac
aaagccaagaatgacttcactatgagatgtatttcattaaaggggtatgt
ctcaaaagtgttgatcgaaatattaaatcagcaggcttgtggaaacaaaa
actacaccatttccctttgatgagtt

gaattcaatggtctatgtcaacaacactcagtattatcaataattttaac
ctcataatgttttataaatcattttcaaggcaagcataattaactgcatt
acaaaaacttatgtaaacttcaaaaaactggggttttttttgaacggatg
aaatcatatattgcctgaagaaaaagactatcgtaaacatcagaaaactt
tttaacaagtaatgtttccatatataatatttgctttgttattaataatt
tatttaaatattaatgtgccctctagttaatatgtatccctcagttatca
cctcagacatcattgcatcttaagagagctctgtgtttatccaactaggt
agtccctcgcttccttgtctatagcctgtttattcattacctctatttat
cagaaatggctaggattctcaaagtgcagtccatggtcaagaattatgat
tttcaccttggcatgtgttaggaaactatgtcttcaggatcaactccaga
cacactatatcagaatcaatgttcatgcatcttgggaagctcctggttaa
caaaccttccaagtaactgttacaagctacctgaagagtctggggcccct
gtgtttactgtagaagttaagctgagtaatgaaaggaaactgtataattt
gtggttttagcccagaatctgaatatcatgtctcacataaattacctgtt
tctcaaagtgtcatgcttacagagatacagcctgcaatagtgaaaatgaa
gccaaatcccactgtgtccttgttgtttcatgttttaagcattgcagatt
tactaatttctgaatacacactatattctcatggggacaatttggagcct
cctttagtacagatgaaggatgagggccagaaatactgggaaccaaaatg
gtcagtgatcagcagaacccaaaggcttattcttctgagaagattcagag
tgtagcctttataaccatgaaatcacatagacttagatgcatgaaatatc
agaaataacaaattagatatacatcctactcagcttattagtatgtattg
tgcccatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49079953_49081012
seq2: B6Ng01-316A08.g_68_1126

seq1  GAATTCAATGGTCTATGTCAACAACACTCAGTATTATCAATAATTTTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGTCTATGTCAACAACACTCAGTATTATCAATAATTTTAAC  50

seq1  CTCATAATGTTTTATAAATCATTTTCAAGGCAAGCATAATTAACTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAATGTTTTATAAATCATTTTCAAGGCAAGCATAATTAACTGCATT  100

seq1  ACAAAAACTTATGTAAACTTCAAAAAACTGGGGTTTTTTTTGAACGGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACTTATGTAAACTTCAAAAAACTGGGGTTTTTTTTGAACGGATG  150

seq1  AAATCATATATTGCCTGAAGAAAAAGACTATCGTAAACATCAGAAAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATATATTGCCTGAAGAAAAAGACTATCGTAAACATCAGAAAACTT  200

seq1  TTTAACAAGTAATGTTTCCATATATAATATTTGCTTTGTTATTAATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAAGTAATGTTTCCATATATAATATTTGCTTTGTTATTAATAATT  250

seq1  TATTTAAATATTAATGTGCCCTCTAGTTAATATGTATCCCTCAGTTATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAATATTAATGTGCCCTCTAGTTAATATGTATCCCTCAGTTATCA  300

seq1  CCTCAGACATCATTGCATCTTAAGAGAGCTCTGTGTTTATCCAACTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACATCATTGCATCTTAAGAGAGCTCTGTGTTTATCCAACTAGGT  350

seq1  AGTCCCTCGCTTCCTTGTCTATAGCCTGTTTATTCATTACCTCTATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTCGCTTCCTTGTCTATAGCCTGTTTATTCATTACCTCTATTTAT  400

seq1  CAGAAATGGCTAGGATTCTCAAAGTGCAGTCCATGGTCAAGAATTATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGGCTAGGATTCTCAAAGTGCAGTCCATGGTCAAGAATTATGAT  450

seq1  TTTCACCTTGGCATGTGTTAGGAAACTATGTCTTCAGGATCAACTCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCTTGGCATGTGTTAGGAAACTATGTCTTCAGGATCAACTCCAGA  500

seq1  CACACTATATCAGAATCAATGTTCATGCATCTTGGGAAGCTCCTGGTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTATATCAGAATCAATGTTCATGCATCTTGGGAAGCTCCTGGTTAA  550

seq1  CAAACCTTCCAAGTAACTGTTACAAGCTACCTGAAGAGTCTGGGGCCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTTCCAAGTAACTGTTACAAGCTACCTGAAGAGTCTGGGGCCCCT  600

seq1  GTGTTTACTGTAGAAGTTAAGCTGAGTAATGAAAGGAAACTGTATAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTACTGTAGAAGTTAAGCTGAGTAATGAAAGGAAACTGTATAATTT  650

seq1  GTGGTTTTAGCCCAGAATCTGAATATCATGTCTCACATAAATTACCTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTAGCCCAGAATCTGAATATCATGTCTCACATAAATTACCTGTT  700

seq1  TCTCAAAGTGTCATGCTTACAGAGATACAGCCTGCAATAGTGAAAATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAGTGTCATGCTTACAGAGATACAGCCTGCAATAGTGAAAATGAA  750

seq1  GCCAAATCCCACTGTGTCCTTGTTGTTTCATGTTTTAAGCATTGCAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATCCCACTGTGTCCTTGTTGTTTCATGTTTTAAGCATTGCAGATT  800

seq1  TACTAATTTCTGAATACACACTATATTCTCATGGGGACAATTTGGAGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATTTCTGAATACACACTATATTCTCATGGGGACAATTTGGAGCCT  850

seq1  CCTTTAGTACAGATGAAGGATGAGGGCCAGAAATACTGGGAACCAAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTACAGATGAAGGATGAGGGCCAGAAATACTGGGAACCAAAATG  900

seq1  GTCAGTGATCAGCAGAA-CCAAAGGC-TATTCTTCTGAGAAGATTCAGAG  948
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  GTCAGTGATCAGCAGAACCCAAAGGCTTATTCTTCTGAGAAGATTCAGAG  950

seq1  TGTAGCCTTTATAACCATGAAATCACATAGACTTAGGATGCATGGAAATA  998
      ||||||||||||||||||||||||||||||||||| ||||||| ||||| 
seq2  TGTAGCCTTTATAACCATGAAATCACATAGACTTA-GATGCAT-GAAAT-  997

seq1  ATCAGAAATAACAAATTAAGATAATACATCCTACTCAGC-TATTAGTATG  1047
      ||||||||||||||||| |||| |||||||||||||||| ||||||||||
seq2  ATCAGAAATAACAAATT-AGAT-ATACATCCTACTCAGCTTATTAGTATG  1045

seq1  TATTGTG-CCATAT  1060
      ||||||| ||||||
seq2  TATTGTGCCCATAT  1059


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