BAC Information

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BAC

Clone NameB6Ng01-317A15
Chromosome18 (Build37)
Map Location 56,924,227 - 56,925,381
singlet/doubletsinglet
Overlap geneMarch3
Upstream geneLOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104, LOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1
Downstream geneC330018D20Rik, Megf10, LOC672445, Prrc1, 1700011I03Rik, 4930511M06Rik, 2210409D07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317A15.bB6Ng01-317A15.g
ACCGA107282GA107283
length1,143372
definitionB6Ng01-317A15.b B6Ng01-317A15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataagagatctgcctgcctctgcctcctgagtgctgggattaaa
ggcgtgcactgccatactggctcttagattatatattttaaaagtatctg
ccagtatgctgtctacaggagactaagacggctggaaagcattaaagtgg
acaagcaggatattaatatattttggtaggaggaacaatgtattcctggg
aattgaactcaggacgtctggaagaacagccagcgctacctaaccattga
gccatctctctagctcacgaaccatagatgtgatgacgaagatcgatata
atcttaaaacacaaaacagctaccagcaagacaaaggagaaatagagaac
tgtaattagaaatttattcccttttcagaaataggtcaggctcaaataag
acagagcctacacaatgagctgtagtttatacatacacgttacagttgtt
tagcatgggtgtgattgtgtgtgtgcgagcatgtgctcgtgcacaaatac
acatgcagtaggcatgttttaaacaaccaaccatgtgttaatccagaaaa
atgtcatggttttagctgggtggtggtggcacacacatttgatcccagaa
ctctgaaggcagaggcaggtggatctttgtgtttgaggctagcctggtct
acagagcaagttccaggacaatgtggccagagtggtgctgctaacttctt
acagagggagtgacttaataagcagacagcaaggttgatagtgccagtct
cctcccagtaccgggagctataaacggaaatgaaaacagtcagggaagct
tcagttttctgatgctgtatgtatgggagcagaagtgttagtgtgagctt
tccagtttcaacagaactagatataaaaatcctgttaggaatggtgcaca
ttactgtatcttattagaatgggttaaataggaaattatacatattcctc
agtgttatatatttaattatttaatagctttagactatagaaatagagaa
attcagtgagattaacatgagggctatttttagcacaatatggagacacg
gggtgcattgttctgaaagaacagcgaacttttactgcccacagatatgt
ggggctagaacgcactggttagacgtaggactcaggctaagcg
caggttagcctgagctacatagaaaaaccctatctaccacaagacctaca
gagtcaactaacctgggctcattggggctcagagacatcaatcaaagagc
atgcaggggctgagcctaggacccctacacatttgtagcagatgtgcagc
ttggtcttcatatggattccctaacaattggagtgggagctgtatctgac
tctgttgcctgccattggacccccttcccctaactgtactgcctggttgg
tcctcagtgggagagaatgggcttattccttctgggaccagctatcccag
ggtggtgtggtaccctagtggggcttccccttctctgagaaggagggaaa
agggtagtaggggagggatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_56924227_56925381
seq2: B6Ng01-317A15.b_46_1188

seq1  GAATTCATAAGAGATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGAGATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAA  50

seq1  GGCGTGCACTGCCATACTGGCTCTTAGATTATATATTTTAAAAGTATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGCACTGCCATACTGGCTCTTAGATTATATATTTTAAAAGTATCTG  100

seq1  CCAGTATGCTGTCTACAGGAGACTAAGACGGCTGGAAAGCATTAAAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATGCTGTCTACAGGAGACTAAGACGGCTGGAAAGCATTAAAGTGG  150

seq1  ACAAGCAGGATATTAATATATTTTGGTAGGAGGAACAATGTATTCCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAGGATATTAATATATTTTGGTAGGAGGAACAATGTATTCCTGGG  200

seq1  AATTGAACTCAGGACGTCTGGAAGAACAGCCAGCGCTACCTAACCATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAACTCAGGACGTCTGGAAGAACAGCCAGCGCTACCTAACCATTGA  250

seq1  GCCATCTCTCTAGCTCACGAACCATAGATGTGATGACGAAGATCGATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTCTCTAGCTCACGAACCATAGATGTGATGACGAAGATCGATATA  300

seq1  ATCTTAAAACACAAAACAGCTACCAGCAAGACAAAGGAGAAATAGAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAAACACAAAACAGCTACCAGCAAGACAAAGGAGAAATAGAGAAC  350

seq1  TGTAATTAGAAATTTATTCCCTTTTCAGAAATAGGTCAGGCTCAAATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTAGAAATTTATTCCCTTTTCAGAAATAGGTCAGGCTCAAATAAG  400

seq1  ACAGAGCCTACACAATGAGCTGTAGTTTATACATACACGTTACAGTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCTACACAATGAGCTGTAGTTTATACATACACGTTACAGTTGTT  450

seq1  TAGCATGGGTGTGATTGTGTGTGTGCGAGCATGTGCTCGTGCACAAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGGGTGTGATTGTGTGTGTGCGAGCATGTGCTCGTGCACAAATAC  500

seq1  ACATGCAGTAGGCATGTTTTAAACAACCAACCATGTGTTAATCCAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAGTAGGCATGTTTTAAACAACCAACCATGTGTTAATCCAGAAAA  550

seq1  ATGTCATGGTTTTAGCTGGGTGGTGGTGGCACACACATTTGATCCCAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATGGTTTTAGCTGGGTGGTGGTGGCACACACATTTGATCCCAGAA  600

seq1  CTCTGAAGGCAGAGGCAGGTGGATCTTTGTGTTTGAGGCTAGCCTGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAGGCAGAGGCAGGTGGATCTTTGTGTTTGAGGCTAGCCTGGTCT  650

seq1  ACAGAGCAAGTTCCAGGACAATGTGGCCAGAGTGGTGCTGCTAACTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAAGTTCCAGGACAATGTGGCCAGAGTGGTGCTGCTAACTTCTT  700

seq1  ACAGAGGGAGTGACTTAATAAGCAGACAGCAAGGTTGATAGTGCCAGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGGAGTGACTTAATAAGCAGACAGCAAGGTTGATAGTGCCAGTCT  750

seq1  CCTCCCAGTACCGGGAGCTATAAACGGAAATGAAAACAGTCAGGGAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAGTACCGGGAGCTATAAACGGAAATGAAAACAGTCAGGGAAGCT  800

seq1  TCAGTTTTCTGATGCTGTATGTATGGGAGCAGAAGTGTTAGTGTGAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTCTGATGCTGTATGTATGGGAGCAGAAGTGTTAGTGTGAGCTT  850

seq1  TCCAGTTTCAACAGAACTAGATATAAAAATCCTGTTAGGAATGGTGCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTTCAACAGAACTAGATATAAAAATCCTGTTAGGAATGGTGCACA  900

seq1  TTACTGTATCTTATTAGAATGGGTTAAATAGAAAATTATACATATTCCTC  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTACTGTATCTTATTAGAATGGGTTAAATAGGAAATTATACATATTCCTC  950

seq1  AGTGTTATTATATTTAATTATTTTAATAGCTTTAAGACTATTAGAAATAG  1000
      ||||||| |||||||||||| |||||||||||| |||||| |||||||||
seq2  AGTGTTA-TATATTTAATTA-TTTAATAGCTTT-AGACTA-TAGAAATAG  996

seq1  AGAAATTCAGTGAGATT-ACATGAGGGCTATTTATAGCAACAATAGTGGA  1049
      ||||||||||||||||| ||||||||||||||| |||| |||||| ||||
seq2  AGAAATTCAGTGAGATTAACATGAGGGCTATTTTTAGC-ACAATA-TGGA  1044

seq1  GACACGGGGTGCATTGTGCCTGAGAGACCAGCAGACATTTTACTG-CCAC  1098
      |||||||||||||||||  |||| ||| |||| ||  |||||||| ||||
seq2  GACACGGGGTGCATTGT-TCTGAAAGAACAGC-GAACTTTTACTGCCCAC  1092

seq1  AGATATGTGGGGGCAGGAGCAGCCACTGTGTTAAGACGGGTAGG-CACAG  1147
      ||||||||||||     || |  ||||| ||| ||||  ||||| | |||
seq2  AGATATGTGGGG---CTAGAACGCACTG-GTT-AGAC--GTAGGACTCAG  1135

seq1  GCTAAGCG  1155
      ||||||||
seq2  GCTAAGCG  1143