BAC Information

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BAC

Clone NameB6Ng01-319H14
Chromosome18 (Build37)
Map Location 65,931,911 - 65,932,841
singlet/doubletsinglet
Overlap genenone
Upstream geneNedd4l, Alpk2, LOC667816, Malt1, LOC638570, LOC100042820, Zfp532, 5330437I02Rik
Downstream geneSec11c, Grp, Rax, Cplx4, Lman1, Ccbe1, Pmaip1, LOC100042852
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319H14.bB6Ng01-319H14.g
ACCGA109093GA109094
length827933
definitionB6Ng01-319H14.b B6Ng01-319H14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagtgttgcagaaagagtttaagaagtgattattggtggca
ccagggtggcatgggtgcaggagagtgggcccactcattgccagccgcca
ttggggctctctatggctcatggagaacagcttctttcctcctcctctct
ctctctctctctctctctctctctctctttcttccttctttctttgcttc
cttccttccttccttcatttcttccttccttccatcctttcttccttcca
cctgtctgtctatctgtctctttttcagcatagatccctgagttttgact
tgacgtgggggggggggtgtccatttttattcttctcttatactatatat
cccaactacagttcccctctgtcccctccccatttctcctgtcccctaga
cccactgctcctccggctcctttcagaagagtggagacctcccagtggtg
tcagtcaaacaaggcttaacaagatgggataacacatcaaagctggatga
ggaagcccaatatgaggaaaagggtcagagacagctccacacccactgtt
aggagaccaataaaaaccccaagctaaacaaccacagtgcgtatgcagag
gacctgttgcaggttcacacaggcaccgtggttgctgcttcaggtctctg
tgagcctctatgagctctgcttagtttgattctgtgggtcatgttcctct
gggtgttctggactcttctggctcttacaatgtttcctcccttctctgca
ggtttcccagctcacctactgtttggctgtgggtctctggatctgctccc
atcagcagctggaggaggccactctga
gaattctccatcaaaaagataaacctagttaaccctgaaatgactgcagc
aagaaagaacacaacaagtgcattctccaagggccatggttcacacacag
aagttatagaacaactttaagtggcatttctgatcttaccccttgttgga
agcagggtctcttgttcagtgcaatatacatcagggcaagcaagctggct
gtcgagattccggggtgttgggggaggattcccgtgtctgtttctcatct
caggataggcacactgggattacaaatgccagtgactacatcaggtttta
tgtggcttacagggacctgaattctggtcttcctacttacacaataagtg
ctttttccactgatccgtctcctcagcctctgggataagttattacagtt
ataagtctctacagcatcacagcctgctcccaggtggtagtggaatgggc
tgtctgtgactgtagtgagaaagtgggtcattctcaggccatcttggcct
ccatgtcaggctcacccatttatagcttctgttgatgagtttgtgcttca
tgttggtaaaactgatttccattttcgcctttcttaacttgcctacactg
tttattgaacttgataaggcaagctaaatggaaacttaaactagaaacgg
gtgatggaaggtggaagctccctcctgccttaaaagatacagcttcctgc
ttctatgtgtgggtggtttaagctttttgacaagtcatgtgttagtgact
tttgcattgctatgacaaagtacctgacagaaacaacatataggaaaaag
atttattttctgttcatggtttcagaggggtacagtccatcatggtaggg
aaaacatgggagattggggttagttcatagcagtatgtctcagtttgggt
tttattgatatggagagacacatgacccatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_65931911_65932841
seq2: B6Ng01-319H14.g_69_1001

seq1  GAATTCTCCATCAAAAAGATAAACCTAGTTAACCCTGAAATGACTGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATCAAAAAGATAAACCTAGTTAACCCTGAAATGACTGCAGC  50

seq1  AAGAAAGAACACAACAAGTGCATTCTCCAAGGGCCATGGTTCACACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAACACAACAAGTGCATTCTCCAAGGGCCATGGTTCACACACAG  100

seq1  AAGTTATAGAACAACTTTAAGTGGCATTTCTGATCTTACCCCTTGTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATAGAACAACTTTAAGTGGCATTTCTGATCTTACCCCTTGTTGGA  150

seq1  AGCAGGGTCTCTTGTTCAGTGCAATATACATCAGGGCAAGCAAGCTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGTCTCTTGTTCAGTGCAATATACATCAGGGCAAGCAAGCTGGCT  200

seq1  GTCGAGATTCCGGGGTGTTGGGGGAGGATTCCCGTGTCTGTTTCTCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAGATTCCGGGGTGTTGGGGGAGGATTCCCGTGTCTGTTTCTCATCT  250

seq1  CAGGATAGGCACACTGGGATTACAAATGCCAGTGACTACATCAGGTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAGGCACACTGGGATTACAAATGCCAGTGACTACATCAGGTTTTA  300

seq1  TGTGGCTTACAGGGACCTGAATTCTGGTCTTCCTACTTACACAATAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTACAGGGACCTGAATTCTGGTCTTCCTACTTACACAATAAGTG  350

seq1  CTTTTTCCACTGATCCGTCTCCTCAGCCTCTGGGATAAGTTATTACAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCACTGATCCGTCTCCTCAGCCTCTGGGATAAGTTATTACAGTT  400

seq1  ATAAGTCTCTACAGCATCACAGCCTGCTCCCAGGTGGTAGTGGAATGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCTCTACAGCATCACAGCCTGCTCCCAGGTGGTAGTGGAATGGGC  450

seq1  TGTCTGTGACTGTAGTGAGAAAGTGGGTCATTCTCAGGCCATCTTGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTGACTGTAGTGAGAAAGTGGGTCATTCTCAGGCCATCTTGGCCT  500

seq1  CCATGTCAGGCTCACCCATTTATAGCTTCTGTTGATGAGTTTGTGCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCAGGCTCACCCATTTATAGCTTCTGTTGATGAGTTTGTGCTTCA  550

seq1  TGTTGGTAAAACTGATTTCCATTTTCGCCTTTCTTAACTTGCCTACACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTAAAACTGATTTCCATTTTCGCCTTTCTTAACTTGCCTACACTG  600

seq1  TTTATTGAACTTGATAAGGCAAGCTAAATGGAAACTTAAACTAGAAACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGAACTTGATAAGGCAAGCTAAATGGAAACTTAAACTAGAAACGG  650

seq1  GTGATGGAAGGTGGAAGCTCCCTCCTGCCTTAAAAGATACAGCTTCCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGAAGGTGGAAGCTCCCTCCTGCCTTAAAAGATACAGCTTCCTGC  700

seq1  TTCTATGTGTGGGTGGTTTAAGCTTTTTGACAAGTCATGTGTTAGTGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTGTGGGTGGTTTAAGCTTTTTGACAAGTCATGTGTTAGTGACT  750

seq1  TTTGCATTGCTATGACAAAGTACCTGACAGAAACAACATATAGGAAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTGCTATGACAAAGTACCTGACAGAAACAACATATAGGAAAAAG  800

seq1  ATTTA-TTTCTGTTCATGGTTTCAGAGGGGTACAGTCCATCATGGTAGGG  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTCTGTTCATGGTTTCAGAGGGGTACAGTCCATCATGGTAGGG  850

seq1  AAAACATGGGAGA-TGGGGTTAGTTCATAGCAGTATGTCTCAGTTTGGGT  898
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAAACATGGGAGATTGGGGTTAGTTCATAGCAGTATGTCTCAGTTTGGGT  900

seq1  TTTATTGATATGGAGAGACAACATGA-CCATGGC  931
      ||||||||||||||||||| |||||| |||||||
seq2  TTTATTGATATGGAGAGAC-ACATGACCCATGGC  933