BAC Information

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BAC

Clone NameB6Ng01-319L24
Chromosome18 (Build37)
Map Location 8,577,193 - 8,578,337
singlet/doubletsinglet
Overlap genenone
Upstream geneMpp7, EG622384, LOC100039562, LOC100039606, Wac, LOC665121, LOC225134, LOC665132, EG433158
Downstream geneEG545242, LOC665161, Fzd8, 9430022F06Rik, Ccny, LOC665176, LOC665184, EG639618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319L24.bB6Ng01-319L24.g
ACCGA109303GA109304
length1,1261,197
definitionB6Ng01-319L24.b B6Ng01-319L24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagctgtggaacatgtagaagagaatgtcctcatttaaattcc
ctggaaagagagctactgtggtgtaacttgagcctcaggagtaacataat
ggggctgatcaaccagcaggggtatcatcagctccttcattcaatatcct
tagtgttttataaagaaaaaaggtctctggagtgtggagattacagggaa
actggcatgcctaatgtgtgcttcttgtttgtatctctataagtgttcct
gttccatttgctttagaatgtgggtgcactcacctaagcgctatgtgttc
aaaggtttttaggtatcctcctctgttattgtctgcaatattgccttgag
acaggatcccatgagtttgataatttttcttagtctctaaaaaatattta
caaccttatctttcaatacacttcttgtttttgtaactttacttttcata
gttttttctcttgttttaaggatgactcttttagaatatttttaatattt
atgttcttttgtaactcttgaggtatttaaaaatgtagaaagatgtgcac
ttctaattgtcttagttactatcttgttgcccctacaaaagaatctaatg
agagcaacttaggaagcgagtcatcattttggtttgcagtttgaggacac
agcctgtcctggcgggaaaaatgcggtgtcagtatctggagacagagatc
acgttgtattagcagtcaggaagcagacagagatgagcgctgctgttcag
ctcactttctcctttatcctgggactccagctcctcggatggggtccatt
gcatcatgggtaaatttcttttcagtcaaatctctctggagccactctca
tggtcacccttaatagtatgtttccatagtgatctgatgggaaaaaaaat
taaccattacagcagtaatcatggaaatgtaaacaaaaccaaaggatgaa
tatcaccctacactgatactaatgtcctttttctgtctttcttctccttt
ctttgtactctcttctcattcctcatcccatcgtcttcctctgcatgtgt
ttgcagtgccaggaaatagatcagctactatgtaattgttatggctggct
tcagaaaggtaagcgaacacccaaag

gaattctcacctgaggattaccgaatggctgagaagcacctgacaaaaaa
atcttcagcatccttaatcatcaaggaaatgcaaatcaaaacaaccctga
gattcaacctcacaccagtcagaatggataagatcaaaaattcaagtgac
agcagatgctggctaggatgtggagaaagaggtacactcctccattgttg
gtggaattgcaagcttgtacaaccactttggaaatcagtctggcggttcc
tcagaaaattggacatagtactaccggaggatccagcaatacctctcctg
ggcatatatccagaagatgtcccaaccagtaagaaggacacatgctccac
tatgttcacagcagccttatttataatagccagaagctggaaagaaccca
gatgcccctcaacagaggaatggatacagaaaatgtggtacatttacaca
atggagtactactcagctattaaaaagaatgaatttatgaaattcctagc
caaatggatggacctggagggcatcattctgagtgagataacacaagtac
aaaggaactcacacaatatatactcactgatatgtggatattagcccaaa
acttaggatacccaggatataagataaaatttgctaaatgcatgaaactc
aagaagaatgaagtccaaagtgtggacactgtgccccttctttgaattgg
gaacaaaacacccatggaaggagttacagagacaaagtttggagctgtga
caaaggtatggaccatctagagactgccataccagggatccaccccataa
tcagcatccaaatgctgacaccattgcatacactatcaagattttgctga
aaggacccagatatagctgtctcttgtgagactatgccagggcctagcaa
acacagaagtggatgcttacagtcagctaatggatgtatcacaggctccc
aatggaggagctagagaaagtacccaagagctaaagggatctgcaccctt
ataggtggacacatatgactaccagtacgtcagaagcttcttgactctag
ctgcatatgttatcaaaagatggcctagtgtcatcacttggaagagaagg
ccataaacaccaacttatattgcccagttaagggtaacggttctgaatgg
aatggggttgctaggtaagcgctgtatctactctactcttgtatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_8577193_8578337
seq2: B6Ng01-319L24.b_48_1173

seq1  GAATTCTGAGCTGTGGAACATGTAGAAGAGAATGTCCTCATTTAAATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGCTGTGGAACATGTAGAAGAGAATGTCCTCATTTAAATTCC  50

seq1  CTGGAAAGAGAGCTACTGTGGTGTAACTTGAGCCTCAGGAGTAACATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGAGAGCTACTGTGGTGTAACTTGAGCCTCAGGAGTAACATAAT  100

seq1  GGGGCTGATCAACCAGCAGGGGTATCATCAGCTCCTTCATTCAATATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGATCAACCAGCAGGGGTATCATCAGCTCCTTCATTCAATATCCT  150

seq1  TAGTGTTTTATAAAGAAAAAAGGTCTCTGGAGTGTGGAGATTACAGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTTATAAAGAAAAAAGGTCTCTGGAGTGTGGAGATTACAGGGAA  200

seq1  ACTGGCATGCCTAATGTGTGCTTCTTGTTTGTATCTCTATAAGTGTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCATGCCTAATGTGTGCTTCTTGTTTGTATCTCTATAAGTGTTCCT  250

seq1  GTTCCATTTGCTTTAGAATGTGGGTGCACTCACCTAAGCGCTATGTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATTTGCTTTAGAATGTGGGTGCACTCACCTAAGCGCTATGTGTTC  300

seq1  AAAGGTTTTTAGGTATCCTCCTCTGTTATTGTCTGCAATATTGCCTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTTTTAGGTATCCTCCTCTGTTATTGTCTGCAATATTGCCTTGAG  350

seq1  ACAGGATCCCATGAGTTTGATAATTTTTCTTAGTCTCTAAAAAATATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATCCCATGAGTTTGATAATTTTTCTTAGTCTCTAAAAAATATTTA  400

seq1  CAACCTTATCTTTCAATACACTTCTTGTTTTTGTAACTTTACTTTTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTATCTTTCAATACACTTCTTGTTTTTGTAACTTTACTTTTCATA  450

seq1  GTTTTTTCTCTTGTTTTAAGGATGACTCTTTTAGAATATTTTTAATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCTCTTGTTTTAAGGATGACTCTTTTAGAATATTTTTAATATTT  500

seq1  ATGTTCTTTTGTAACTCTTGAGGTATTTAAAAATGTAGAAAGATGTGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTTTGTAACTCTTGAGGTATTTAAAAATGTAGAAAGATGTGCAC  550

seq1  TTCTAATTGTCTTAGTTACTATCTTGTTGCCCCTACAAAAGAATCTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTGTCTTAGTTACTATCTTGTTGCCCCTACAAAAGAATCTAATG  600

seq1  AGAGCAACTTAGGAAGCGAGTCATCATTTTGGTTTGCAGTTTGAGGACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAACTTAGGAAGCGAGTCATCATTTTGGTTTGCAGTTTGAGGACAC  650

seq1  AGCCTGTCCTGGCGGGAAAAATGCGGTGTCAGTATCTGGAGACAGAGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTCCTGGCGGGAAAAATGCGGTGTCAGTATCTGGAGACAGAGATC  700

seq1  ACGTTGTATTAGCAGTCAGGAAGCAGACAGAGATGAGCGCTGCTGTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGTATTAGCAGTCAGGAAGCAGACAGAGATGAGCGCTGCTGTTCAG  750

seq1  CTCACTTTCTCCTTTATCCTGGGACTCCAGCTCCTCGGATGGGGTCCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTCTCCTTTATCCTGGGACTCCAGCTCCTCGGATGGGGTCCATT  800

seq1  GCATCATGGGTAAATTTCTTTTCAGTCAAATCTCTCTGGAGCCACTCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATGGGTAAATTTCTTTTCAGTCAAATCTCTCTGGAGCCACTCTCA  850

seq1  TGGTCACCCTTAATAGTATGTTTCCATAGTGATCTGATGGGAAAAAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACCCTTAATAGTATGTTTCCATAGTGATCTGATGGGAAAAAAAAT  900

seq1  TAACCATTACAGCAGTAATCATGGAAATGTAAACAAAAACCAAAGGATGA  950
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TAACCATTACAGCAGTAATCATGGAAATGTAAAC-AAAACCAAAGGATG-  948

seq1  AATATCACCCTACAACTGATACTAAATGTCCTTTTTCTGTCTTTTCTTCT  1000
      ||||||||||||| ||||||||| ||||||||||||||||| ||||||||
seq2  AATATCACCCTAC-ACTGATACT-AATGTCCTTTTTCTGTC-TTTCTTCT  995

seq1  CCTTTCTTTGTTACTCTCTTCCTCCATCCCTCCTTCCCATCGTTCCTTCC  1050
      |||||||||| ||||||||||   ||| ||| | |||||||||  |||||
seq2  CCTTTCTTTG-TACTCTCTTC--TCATTCCT-CATCCCATCGT--CTTCC  1039

seq1  TCTGGCATGTGGTCTGCCAGTGGCCAGGAAAATAGATCAGCTACTATGGA  1100
      ||| |||||| || || |||| |||||| |||||||||||||||||| | 
seq2  TCT-GCATGT-GTTTG-CAGT-GCCAGG-AAATAGATCAGCTACTAT-GT  1083

seq1  AATTGTTAT-GCTGGCCTTCAGGAAAGTTAAGCAGAACACCCAAAG  1145
      ||||||||| ||||| ||||| ||||| ||||| ||||||||||||
seq2  AATTGTTATGGCTGG-CTTCA-GAAAGGTAAGC-GAACACCCAAAG  1126


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