BAC Information

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BAC

Clone NameB6Ng01-321B10
Chromosome18 (Build37)
Map Location 31,964,938 - 32,087,345
singlet/doubletdoublet
Overlap geneEG626327, Wdr33, Sft2d3
Upstream geneRit2, EG666130, Syt4, LOC383420, Slc25a46, Sap130, LOC640549, Ammecr1l, Polr2d
Downstream geneLims2, Gpr17, Myo7b, Iws1, Proc, LOC546710, Map3k2, Ercc3, Bin1, Gypc, LOC100041160, LOC100041170, Tslp, Wdr36
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321B10.bB6Ng01-321B10.g
ACCGA110290GA110291
length13577
definitionB6Ng01-321B10.b B6Ng01-321B10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,964,938 - 31,965,076)(32,087,269 - 32,087,345)
sequence
ctgtgctttattttttctttcttaagtgaaagaatagttagtgtgtgtgt
gagtgtgtgtgtggtagtggtggtgggggacgggtacaatcatgcgcatg
ccagcctccatcgaattcttagccctcttataggt
taggcaccatgctagaccagtaaaatgaagatgacgagaactctaagagc
ctcggttgggggggagggtatggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_31964938_31965076
seq2: B6Ng01-321B10.b_51_185

seq1  CTGTGCTTTATTTTTTCTTTCTTAAGTGAAAGAATAGTTAGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTTATTTTTTCTTTCTTAAGTGAAAGAATAGTTAGTGTGTGTGT  50

seq1  GAGTGTGTGTGTGGTAGTGGTGGTGGGGGACGGGGTAGAAAGAGAGCGCG  100
      ||||||||||||||||||||||||||||||| ||||| ||  |  |||| 
seq2  GAGTGTGTGTGTGGTAGTGGTGGTGGGGGAC-GGGTACAATCA-TGCGCA  98

seq1  AGCGAGCCAGCGAGCGAGCCCTTAAGCTCTCTTATAGGT  139
       || ||||  | | |||   ||| ||| |||||||||||
seq2  TGCCAGCC-TCCATCGAATTCTT-AGCCCTCTTATAGGT  135

seq1: chr18_32087269_32087345
seq2: B6Ng01-321B10.g_74_150 (reverse)

seq1  TCCCCCATACCCTCCCCCCCAACCGAGGCTCTTAGAGTTCTCGTCATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCATACCCTCCCCCCCAACCGAGGCTCTTAGAGTTCTCGTCATCTT  50

seq1  CATTTTACTGGTCTAGCATGGTGCCTA  77
      |||||||||||||||||||||||||||
seq2  CATTTTACTGGTCTAGCATGGTGCCTA  77