BAC Information

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BAC

Clone NameB6Ng01-322E12
Chromosome15 (Build37)18 (Build37)
Map Location 18,725,931 - 18,725,97487,921,070 - 87,922,226
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040162, LOC666835, LOC666839
Downstream geneCdh10, EG666857, EG666875, LOC621884, LOC100040265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322E12.bB6Ng01-322E12.g
ACCGA111162GA111163
length1,0641,155
definitionB6Ng01-322E12.b B6Ng01-322E12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,725,931 - 18,725,974)(87,921,070 - 87,922,226)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcctattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatctttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatggggagatctttccatct
tctgagatcttctttaatttctttcttcagagacttgaagtttttatcat
acagatcttttacttccttagttagagtcacgccgagatattttatatta
tttgtgactattgagaagggtgtgtttccctaatttctttctcagcctgt
ttattctttgtgtagagaaaggcattgacttgtttgagtaattttatatc
cagctacttcacaa

gaattctggggactcttgagagagcataaattcaagagctttgagagggc
tggtggaggctgttaatcctcctattactgctgcttcctgctgctatggt
tcatcaaatatccatgaacaaagagacaagaagaagaaactggatagcct
gacaacaaagattggacttgctccaaggacgagggtgcccctaattagca
ggaaattgtctaaagagctctatgcccctgctcccttctaactttctttc
tctcctacctaatgttgcaagggatttggggtggaatgattagaaaggtg
gtagataataaagtaataaagtagcccaaattgtacacttacatactatt
tagtggtaaatatgacaactttataagaagtcatcaagatcatgaaacca
caagagataaacagagatttcagtaacaaaaatgtaaatggcaggagtct
aatacatgacattcatggttttgctaatatataaaagaaactccaggaat
aaattgaaaaataaaccattacctaaaaaactggagacacacttttccaa
atgcccattgtatttttgtcctataagtgaatgataattaaagcaaaatt
ccattaatgaacacaagtttatgcctatccctttttttttagctagaact
gaaattcaaataatatttaaaaaacaatgagagtaacataattttctgaa
actaaacatgggtatgagaatttttaaataatttgtctacgtgttcttga
tgtagtcaaataaaaagaacacaagtcctgtgctaatcttaattgccaaa
aattacatactacttgtagtataattgactgtgaaattcaaattaacata
ccctatatgaaagttatagtatacattaaacacacacatattacgtcttt
aactttatgtggtaccatgttcgtatgtggtccttgccattgcccttgtt
taaaagtaactgctaatattgggctgagagttctctcttttatcactaga
attatttgttattttcaaaaaggaaagtgaaaattaaaagtagtacgagc
tttcacaaaatgagccatggattctcttatttcgaataaaaatttaatga
tattattaaacgttctgaatttatgcctggcacctatacactttagtcaa
tactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_18725931_18725974
seq2: B6Ng01-322E12.b_709_752 (reverse)

seq1  TTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAGCTCTTCT  44
      |||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTCT  44


seq1: chr18_87921070_87922226
seq2: B6Ng01-322E12.g_63_1217

seq1  GAATTCTGGGGACTCTTGAGAGAGCATAAATTCAAGAGCTTTGAGAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGACTCTTGAGAGAGCATAAATTCAAGAGCTTTGAGAGGGC  50

seq1  TGGTGGAGGCTGTTAATCCTCCTATTACTGCTGCTTCCTGCTGCTATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGGCTGTTAATCCTCCTATTACTGCTGCTTCCTGCTGCTATGGT  100

seq1  TCATCAAATATCCATGAACAAAGAGACAAGAAGAAGAAACTGGATAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAATATCCATGAACAAAGAGACAAGAAGAAGAAACTGGATAGCCT  150

seq1  GACAACAAAGATTGGACTTGCTCCAAGGACGAGGGTGCCCCTAATTAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAAAGATTGGACTTGCTCCAAGGACGAGGGTGCCCCTAATTAGCA  200

seq1  GGAAATTGTCTAAAGAGCTCTATGCCCCTGCTCCCTTCTAACTTTCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGTCTAAAGAGCTCTATGCCCCTGCTCCCTTCTAACTTTCTTTC  250

seq1  TCTCCTACCTAATGTTGCAAGGGATTTGGGGTGGAATGATTAGAAAGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTACCTAATGTTGCAAGGGATTTGGGGTGGAATGATTAGAAAGGTG  300

seq1  GTAGATAATAAAGTAATAAAGTAGCCCAAATTGTACACTTACATACTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAATAAAGTAATAAAGTAGCCCAAATTGTACACTTACATACTATT  350

seq1  TAGTGGTAAATATGACAACTTTATAAGAAGTCATCAAGATCATGAAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTAAATATGACAACTTTATAAGAAGTCATCAAGATCATGAAACCA  400

seq1  CAAGAGATAAACAGAGATTTCAGTAACAAAAATGTAAATGGCAGGAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGATAAACAGAGATTTCAGTAACAAAAATGTAAATGGCAGGAGTCT  450

seq1  AATACATGACATTCATGGTTTTGCTAATATATAAAAGAAACTCCAGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGACATTCATGGTTTTGCTAATATATAAAAGAAACTCCAGGAAT  500

seq1  AAATTGAAAAATAAACCATTACCTAAAAAACTGGAGACACACTTTTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAAAATAAACCATTACCTAAAAAACTGGAGACACACTTTTCCAA  550

seq1  ATGCCCATTGTATTTTTGTCCTATAAGTGAATGATAATTAAAGCAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCATTGTATTTTTGTCCTATAAGTGAATGATAATTAAAGCAAAATT  600

seq1  CCATTAATGAACACAAGTTTATGCCTATCCCTTTTTTTTTAGCTAGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAATGAACACAAGTTTATGCCTATCCCTTTTTTTTTAGCTAGAACT  650

seq1  GAAATTCAAATAATATTTAAAAAACAATGAGAGTAACATAATTTTCTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCAAATAATATTTAAAAAACAATGAGAGTAACATAATTTTCTGAA  700

seq1  ACTAAACATGGGTATGAGAATTTTTAAATAATTTGTCTACGTGTTCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACATGGGTATGAGAATTTTTAAATAATTTGTCTACGTGTTCTTGA  750

seq1  TGTAGTCAAATAAAAAGAACACAAGTCCTGTGCTAATCTTAATTGCCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCAAATAAAAAGAACACAAGTCCTGTGCTAATCTTAATTGCCAAA  800

seq1  AATTACATACTACTTGTAGTATAATTGACTGTGAAATTCAAATTAACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATACTACTTGTAGTATAATTGACTGTGAAATTCAAATTAACATA  850

seq1  CCCTATATGAAAGTTATAGTATACATTAAACACACACATATTACGTCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATATGAAAGTTATAGTATACATTAAACACACACATATTACGTCTTT  900

seq1  AACTTTATGTGGTACCATGTTCGTATGTGGTCCTTGCCATTG-CCTTGTT  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACTTTATGTGGTACCATGTTCGTATGTGGTCCTTGCCATTGCCCTTGTT  950

seq1  TAAAAGTAACTGCTAATATTGGGCTGAGAGTTCTCTCTTTTATCACTAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTAACTGCTAATATTGGGCTGAGAGTTCTCTCTTTTATCACTAGA  1000

seq1  ATTATTTGTTATTTTCAAAAA-GAAAGTGAAAATTTAAAAGTAGTAACGA  1048
      ||||||||||||||||||||| ||||||||||| ||||||||||| ||||
seq2  ATTATTTGTTATTTTCAAAAAGGAAAGTGAAAA-TTAAAAGTAGT-ACGA  1048

seq1  GC-TTCACAAAATGAGCCATGGATTCTCTTATTTCCAAATAAAAATTAAA  1097
      || ||||||||||||||||||||||||||||||| | |||||||||| ||
seq2  GCTTTCACAAAATGAGCCATGGATTCTCTTATTT-CGAATAAAAATTTAA  1097

seq1  TGATATGTATAAACTTTCTGAATTTAAATGGCCTGCACCCTATACAC-AT  1146
      ||||||   ||||| |||||||||||    |||||   |||||||||  |
seq2  TGATATTATTAAACGTTCTGAATTTA---TGCCTGGCACCTATACACTTT  1144

seq1  AATCAATACTG  1157
      | |||||||||
seq2  AGTCAATACTG  1155


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