BAC Information

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BAC

Clone NameB6Ng01-325C22
Chromosome18 (Build37)
Map Location 57,224,967 - 57,353,558
singlet/doubletdoublet
Overlap geneMegf10
Upstream geneLOC100043104, LOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1, March3, C330018D20Rik
Downstream geneLOC672445, Prrc1, 1700011I03Rik, 4930511M06Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325C22.bB6Ng01-325C22.g
ACCGA113306GA113307
length1,1701,155
definitionB6Ng01-325C22.b B6Ng01-325C22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,224,967 - 57,226,144)(57,352,390 - 57,353,558)
sequence
gaattcttagagactttatatgccgttgtcttgctctcccaggcccatgt
gtttcaactgctatgcggttctcttctcttcttggccttgattttcttct
ctgccctttgacaaagagttaagtgagagaaaatttgtcaatatttaaat
aagcatgcaatctgttcctggatactttgtgaataagccacaagttcagt
tgagaagcctttgttacaaattgcaaagtgtgggacatgatagcccctta
ctgcgaaagaatgatgggtgtacaatgaaatcagacatctggttttcaca
tgtccctgatgagaggacacaagttattattgtattagggaaaactttta
aatgtgctagaaacaaataccctaccacaaaaggtatacatattcctctg
aggaaaaatactcagaggaagaaggcagcacgataaagacccatattctg
ttctattggcttactgatctgatcaaacattgatactaatgagggggtct
tatgaattttccctattttgttttttgtcagcatgagtgcagtgttaagt
cccttagcagtgaacatggcggtcttcagcgtactattcagaaaatccta
aagacaattagctctgatgatatcctgttttaaaagagttcctaagactt
ggcctatgtatttttctaaagccacgaatcaaatgctgattatgttttag
gaaatgacaaactggtagatggcatagttggctttctatatagaaagcac
gaacagtagaaaacactaactagaagaaattcactaagagagaaaaagct
gtagacacccagttggcaagaactcaatacaacatccagtgacttgaaat
attatcatcagcgtcagactgtatgaattgagtacgtgaccaactgattc
ctgctagatatgttagaatcaatgtttcctgcttccaagccattcatggg
ttgtcttgtggtagcttgagcttgtgatgatagatcatgtacagatgtac
ctcagataggatttcccagagccaaaggaaaaacatagtggagatcatga
aagagttctttggctacttagcattttccagggaaagtgtgtaaaggcac
ttgttgctcttgtagaagatctggattggtctaagcacccaaccatgctc
caagatgctcataactctag
gaattcctttacatggaaaagtagaatgtaaaatgtcctttgaggaccct
ggatgtagctcagttgacagagtgctgatctagcctccctgaagccctgg
ctttgattcccaacactgtataaaccacatcaactcggcaaagtaaccca
ggcctgtgctccgagcactcaggaagcagagtcagatggatcagaagttc
aaggtcatccgaggccttatggtaagttccagactagctgggtaaacctg
agattatttctcctggaggagatttttcagttacctgaaagaaatttgat
tgcaaacgcagaagaaaaattcctattctgccttccctgtaagctttcat
taacttagttaaggctgcttggcctgaattaaggactaaaccctgtttct
gctcctttctatagctggaaataattaaaagtgatggccatgctacctgg
ttggcagcaacagctgttgggaagggatcatgaaagcagagtgctaagct
ctttctccctcctgtctccacagcggtaccgagctaacccagcagtatag
agtgtataccattactgaaaggcatcctccatcgcaatcaagagagaagt
aaggtctttgggggtatggggatttagcaatgaaataagccatcacggct
gacaaatgcaaactgtccttaaaaaataaaacaagacaaaacaaacaaaa
acagcaacaacaacaacagaaaccaaatagctcacaagcaagtgagagta
tattgtgagctgaataaatgtactaacctatctttaaaaaaaaatgtttt
ctgcccacagggatagcaggtgagctaagaaagcctagagaaagagtttt
aaaagtgattgctaaagctgtcattcactaaaactgtcattcacacagcc
tggggacacattatacaagtctcgtagaagaaaaagttgatatttctgcc
aacatccttccaggcaagatgaacgagtagatttgcagctgtggccatga
actctgagcagtgctctactgcctgcttggtccactcttcccacaccgag
ctgcctttggagctcatttctgcactcgcatcctgtggggcaagggggta
cggccaacaggagctgagccactcaatccaaccctttgtcaacctgatag
cattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_57224967_57226144
seq2: B6Ng01-325C22.b_44_1213

seq1  GAATTCTTAGAGACTTTATATGCCGTTGTCTTGCTCTCCCAGGCCCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAGACTTTATATGCCGTTGTCTTGCTCTCCCAGGCCCATGT  50

seq1  GTTTCAACTGCTATGCGGTTCTCTTCTCTTCTTGGCCTTGATTTTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAACTGCTATGCGGTTCTCTTCTCTTCTTGGCCTTGATTTTCTTCT  100

seq1  CTGCCCTTTGACAAAGAGTTAAGTGAGAGAAAATTTGTCAATATTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTTTGACAAAGAGTTAAGTGAGAGAAAATTTGTCAATATTTAAAT  150

seq1  AAGCATGCAATCTGTTCCTGGATACTTTGTGAATAAGCCACAAGTTCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGCAATCTGTTCCTGGATACTTTGTGAATAAGCCACAAGTTCAGT  200

seq1  TGAGAAGCCTTTGTTACAAATTGCAAAGTGTGGGACATGATAGCCCCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCCTTTGTTACAAATTGCAAAGTGTGGGACATGATAGCCCCTTA  250

seq1  CTGCGAAAGAATGATGGGTGTACAATGAAATCAGACATCTGGTTTTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGAAAGAATGATGGGTGTACAATGAAATCAGACATCTGGTTTTCACA  300

seq1  TGTCCCTGATGAGAGGACACAAGTTATTATTGTATTAGGGAAAACTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGATGAGAGGACACAAGTTATTATTGTATTAGGGAAAACTTTTA  350

seq1  AATGTGCTAGAAACAAATACCCTACCACAAAAGGTATACATATTCCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTAGAAACAAATACCCTACCACAAAAGGTATACATATTCCTCTG  400

seq1  AGGAAAAATACTCAGAGGAAGAAGGCAGCACGATAAAGACCCATATTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAATACTCAGAGGAAGAAGGCAGCACGATAAAGACCCATATTCTG  450

seq1  TTCTATTGGCTTACTGATCTGATCAAACATTGATACTAATGAGGGGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTGGCTTACTGATCTGATCAAACATTGATACTAATGAGGGGGTCT  500

seq1  TATGAATTTTCCCTATTTTGTTTTTTGTCAGCATGAGTGCAGTGTTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATTTTCCCTATTTTGTTTTTTGTCAGCATGAGTGCAGTGTTAAGT  550

seq1  CCCTTAGCAGTGAACATGGCGGTCTTCAGCGTACTATTCAGAAAATCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGCAGTGAACATGGCGGTCTTCAGCGTACTATTCAGAAAATCCTA  600

seq1  AAGACAATTAGCTCTGATGATATCCTGTTTTAAAAGAGTTCCTAAGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATTAGCTCTGATGATATCCTGTTTTAAAAGAGTTCCTAAGACTT  650

seq1  GGCCTATGTATTTTTCTAAAGCCACGAATCAAATGCTGATTATGTTTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTATGTATTTTTCTAAAGCCACGAATCAAATGCTGATTATGTTTTAG  700

seq1  GAAATGACAAACTGGTAGATGGCATAGTTGGCTTTCTATATAGAAAGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGACAAACTGGTAGATGGCATAGTTGGCTTTCTATATAGAAAGCAC  750

seq1  GAACAGTAGAAAACACTAACTAGAAGAAATTCACTAAGAGAGAAAAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTAGAAAACACTAACTAGAAGAAATTCACTAAGAGAGAAAAAGCT  800

seq1  GTAGACACCCAGTTGGCAAGAACTCAATACAACATCCAGTGACTTGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACACCCAGTTGGCAAGAACTCAATACAACATCCAGTGACTTGAAAT  850

seq1  ATTATCATCAGCGTCAGACTGTATGAATTGAGTACGTGACCAACTGATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATCAGCGTCAGACTGTATGAATTGAGTACGTGACCAACTGATTC  900

seq1  CTGCTAGATATGTTAGAATCAATGTTTCCTGCTTCCAAGCCATTCAT-GG  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTGCTAGATATGTTAGAATCAATGTTTCCTGCTTCCAAGCCATTCATGGG  950

seq1  TTGTCTTGTGGTAGCTTGAGCTTGTGATGATAGATCATGTACAGATGTAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTGTGGTAGCTTGAGCTTGTGATGATAGATCATGTACAGATGTAC  1000

seq1  CTCAGATAAGGATTTCCAAGAGCCAAAGGAAAAACATAGGTGAGAATCAT  1049
      ||||||| ||||||||| |||||||||||||||||||||  ||| |||||
seq2  CTCAGAT-AGGATTTCCCAGAGCCAAAGGAAAAACATAGTGGAG-ATCAT  1048

seq1  GAAAGAGTTCTTTTGGCTACTTAGCAATTTTCCAGGGAAAGTGTGTAAAA  1099
      |||||||||| |||||||||||||| ||||||||||||||||||||||| 
seq2  GAAAGAGTTC-TTTGGCTACTTAGC-ATTTTCCAGGGAAAGTGTGTAAAG  1096

seq1  GCACTTGTTGCTCTTGTAGAAGATCTGGGTTTGGTTCCTAGCAACCCACA  1149
      |||||||||||||||||||||||||| || |||||  |||   ||||| |
seq2  GCACTTGTTGCTCTTGTAGAAGATCT-GGATTGGT--CTAAGCACCCA-A  1142

seq1  CAATGGCTCACAGATGCTCATAACTCTAG  1178
      | || ||||  ||||||||||||||||||
seq2  CCAT-GCTCCAAGATGCTCATAACTCTAG  1170

seq1: chr18_57352390_57353558
seq2: B6Ng01-325C22.g_66_1220 (reverse)

seq1  CAATGCTATCAGTGTGCACAGAGTTTGGGATTGA-TTGCTCAGGCCTCGC  49
      |||||||||||| ||  ||| ||  | ||||||| | ||||||  ||| |
seq2  CAATGCTATCAG-GTTGACAAAGGGTTGGATTGAGTGGCTCAG--CTC-C  46

seq1  TGTTGGCCGTACCCCCCTGCCCCACCAGGATGCCGGAGTGCAGGAAATGA  99
      |||||||||||||||| ||||||| ||||||||  ||||||| |||||||
seq2  TGTTGGCCGTACCCCCTTGCCCCA-CAGGATGC--GAGTGCA-GAAATGA  92

seq1  GCTCCCATAGGCCAGCTC-GTGTGGGAAGAGTGGACCCAAGCAAGGCCAG  148
      ||| ||| ||| |||||| |||||||||||||||| |||||||  | |||
seq2  GCT-CCAAAGG-CAGCTCGGTGTGGGAAGAGTGGA-CCAAGCA--GGCAG  137

seq1  TTAGAGCACTGCTCAGAGTTTCATGGCCACAGCTGCAAATCTACTCGTTC  198
       ||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  -TAGAGCACTGCTCAGAG-TTCATGGCCACAGCTGCAAATCTACTCGTTC  185

seq1  ATCTTGCCTGGAAGGATGTTGGCAG-AATATCAACCTTTTTCTTCTACGA  247
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  ATCTTGCCTGGAAGGATGTTGGCAGAAATATCAA-CTTTTTCTTCTACGA  234

seq1  GACTTGTATAATGTGTTCCCCAGGCTGTGTGAATGACAGTTTTAGTGAAT  297
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GACTTGTATAATGTG-TCCCCAGGCTGTGTGAATGACAGTTTTAGTGAAT  283

seq1  GACAGCTTTAGCAATCACTTTTAAAACTCTTTCTCTAGGCTTTCTTAGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTTTAGCAATCACTTTTAAAACTCTTTCTCTAGGCTTTCTTAGCT  333

seq1  CACCTGCTATCCCTGTGGGCAGAAAACATTTTTTTTTAAAGATAGGTTAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTATCCCTGTGGGCAGAAAACATTTTTTTTTAAAGATAGGTTAG  383

seq1  TACATTTATTCAGCTCACAATATACTCTCACTTGCTTGTGAGCTATTTGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTATTCAGCTCACAATATACTCTCACTTGCTTGTGAGCTATTTGG  433

seq1  TTTCTGTTGTTGTTGTTGCTGTTTTTGTTTGTTTTGTCTTGTTTTATTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTGTTGTTGTTGCTGTTTTTGTTTGTTTTGTCTTGTTTTATTTT  483

seq1  TTAAGGACAGTTTGCATTTGTCAGCCGTGATGGCTTATTTCATTGCTAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGACAGTTTGCATTTGTCAGCCGTGATGGCTTATTTCATTGCTAAA  533

seq1  TCCCCATACCCCCAAAGACCTTACTTCTCTCTTGATTGCGATGGAGGATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATACCCCCAAAGACCTTACTTCTCTCTTGATTGCGATGGAGGATG  583

seq1  CCTTTCAGTAATGGTATACACTCTATACTGCTGGGTTAGCTCGGTACCGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGTAATGGTATACACTCTATACTGCTGGGTTAGCTCGGTACCGC  633

seq1  TGTGGAGACAGGAGGGAGAAAGAGCTTAGCACTCTGCTTTCATGATCCCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGACAGGAGGGAGAAAGAGCTTAGCACTCTGCTTTCATGATCCCT  683

seq1  TCCCAACAGCTGTTGCTGCCAACCAGGTAGCATGGCCATCACTTTTAATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACAGCTGTTGCTGCCAACCAGGTAGCATGGCCATCACTTTTAATT  733

seq1  ATTTCCAGCTATAGAAAGGAGCAGAAACAGGGTTTAGTCCTTAATTCAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAGCTATAGAAAGGAGCAGAAACAGGGTTTAGTCCTTAATTCAGG  783

seq1  CCAAGCAGCCTTAACTAAGTTAATGAAAGCTTACAGGGAAGGCAGAATAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGCCTTAACTAAGTTAATGAAAGCTTACAGGGAAGGCAGAATAG  833

seq1  GAATTTTTCTTCTGCGTTTGCAATCAAATTTCTTTCAGGTAACTGAAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTCTTCTGCGTTTGCAATCAAATTTCTTTCAGGTAACTGAAAAA  883

seq1  TCTCCTCCAGGAGAAATAATCTCAGGTTTACCCAGCTAGTCTGGAACTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCAGGAGAAATAATCTCAGGTTTACCCAGCTAGTCTGGAACTTA  933

seq1  CCATAAGGCCTCGGATGACCTTGAACTTCTGATCCATCTGACTCTGCTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGGCCTCGGATGACCTTGAACTTCTGATCCATCTGACTCTGCTTC  983

seq1  CTGAGTGCTCGGAGCACAGGCCTGGGTTACTTTGCCGAGTTGATGTGGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGCTCGGAGCACAGGCCTGGGTTACTTTGCCGAGTTGATGTGGTT  1033

seq1  TATACAGTGTTGGGAATCAAAGCCAGGGCTTCAGGGAGGCTAGATCAGCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGTGTTGGGAATCAAAGCCAGGGCTTCAGGGAGGCTAGATCAGCA  1083

seq1  CTCTGTCAACTGAGCTACATCCAGGGTCCTCAAAGGACATTTTACATTCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAACTGAGCTACATCCAGGGTCCTCAAAGGACATTTTACATTCT  1133

seq1  ACTTTTCCATGTAAAGGAATTC  1169
      ||||||||||||||||||||||
seq2  ACTTTTCCATGTAAAGGAATTC  1155