BAC Information

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BAC

Clone NameB6Ng01-328E13
Chromosome18 (Build37)
Map Location 3,247,333 - 3,248,477
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664794
Downstream geneCrem, EG621440, Cul2, EG621501, Bambi, LOC100039273, LOC435549, EG664867, LOC621666, Lyzl1, LOC383374
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328E13.bB6Ng01-328E13.g
ACCGA115591GA115592
length1,0271,158
definitionB6Ng01-328E13.b B6Ng01-328E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttattttaatttttttaagatgtatttattgattata
tgtaagtacactgtagctgtcttcagacactccagaagagggagtcagat
cttgttacagatgtttgtgagccaccatgtggttgctgggatttgaactc
cgggccttcggaagagcagtcgggtgctcttacccactgagccatctcac
cagcccttattgtttttaatagctgattagtactccattgtgtaatgtac
aacatttactgtatccattcctctgttgaaggacatctgagttctttcca
acttctggctactataataaataaggttgctatgaacatagtggaacatg
tgtccttattacatgttggagcatcttctgggtatatgcccaggagtggt
atgtattgctgggtactcagatagtactatgtccaattttctgaggaacc
accaaactgatttccagagtggttgtaccagtttttaatcccaccagcaa
tggaggagtgttcctctttctccatatcctcactagcatctgctgtcacc
tgattttttttatcttagccattctgacagttgtgaggtggaatctcagg
cttgttttgatttgcatttccctgatgactaaggattttgaaccattttt
taggtgcttctcagccattcagtattcctcagttgagaattctttgttta
gctctgtaccccatttttaatagggctatttggttctctggagtcctact
tccaagattcaattcagagaccacatgaagctcaagaaggaagactaaag
tgtggatactttggtccttcttagaaggatcaaaatacccatgggaaaag
atacagagacaaagtgtggagcagagactgaaggaaagaccagagactgc
cccacctgtggatccattcgatatacagttaccaaaccaagacactaatt
gtgggtgccaacaagtgcttgctgacaggagcctgagataactgtctcct
gagaggctctgccagtgcctgacaaat

cggaatttaaaaaagtatgcatgtaacaatttttggtagacatttcacat
gttttctgttgtaggtgtctaggatggtgcagaaaaatggagagtccctt
caagcttgtcagcagcttgcagattactaatcagaccattttagacattt
tgtaacatgcctgagactgcttagagatcacatcaaatgcctatctgtct
atctatctatcttaatctaatctaatctcatctcatctaatctactcact
ggtattactttccttattgttgtgaccagatagaaacaaggagggaaggg
aagggcgtgctttacctcatagtttaagaaggggacaaggcccccagtgg
ctgggagggcataggagcaagaaacaggaacagacaggaagtggagctga
gtggcaaaacctcaaggcctatttgcaggggcccactttcttcagtgagg
ttctgcccaataaaggctccaggatcatctgtgaaaatgccaagaaccca
gggaccaagcgttcaaacacacgagcctctggggatacccccatttcata
tacaactcacaacagtctgattttcaaagcactggaaaattaccccaatt
tgttgccctatttttctgtgtaaaaatttaaaatggcactctgtccatat
cctctagagatctgtaatgtgctgtcaccttctggtctcttaatgggatg
tttacatggctaaataatctatagcacagcaagttttaaacactgtcatg
atattgaaagcatgtacaaagatatgtattggccaggactgctttcccac
atgcatttgcagagaaatgaaaattgtggaatagcacaaaagtatcatcc
cagtatggttacacaacgatagatacacacatttatgtaattttataagt
agaaaatgtaaatttatacctaaatttgtgaaaaatggtctggactttat
tactgcttggtgctctgagaccacacagtggtgatctagctggactctga
tttgggtctacctccctgaacccatgagcaacctcctagaaatcaacatt
aatttggggaactagggagaatacaagcaccttggtaatacaactatgaa
agtcagagagtttgaatcctgggagcccatgcaacagctagcatttatgg
tgaaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_3247333_3248477
seq2: B6Ng01-328E13.g_69_1223 (reverse)

seq1  ATGG-TCACCATAAATGCCTAGCTGTTTGCATGGGCTCCAGGGATTCAAA  49
      |||| |||||||||||| ||||||| |||||||||||||  |||||||||
seq2  ATGGTTCACCATAAATG-CTAGCTG-TTGCATGGGCTCCCAGGATTCAAA  48

seq1  CTCT-GGAC-TTCATAGTTGTA-TACC-AGGTGC-TGTA-TCTCCCTAGT  93
      ||||  ||| |||||||||||| |||| |||||| |||| ||||||||||
seq2  CTCTCTGACTTTCATAGTTGTATTACCAAGGTGCTTGTATTCTCCCTAGT  98

seq1  T-CCCAAATT-ATGTTGATTTCTAGGAGGTTGCTCATGGG-TCAGGGAGG  140
      | |||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  TCCCCAAATTAATGTTGATTTCTAGGAGGTTGCTCATGGGTTCAGGGAGG  148

seq1  TAGA-CCAAATCAGAGTCCAGCTAGATCA-CACTGTGTGGTCTCAGAGCA  188
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  TAGACCCAAATCAGAGTCCAGCTAGATCACCACTGTGTGGTCTCAGAGCA  198

seq1  CCAAGCAGTAATAAAGTCCAGACCATTTTTCACAAATTTAGGTATAAATT  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGTAATAAAGTCCAGACCATTTTTCACAAATTTAGGTATAAATT  248

seq1  TACATTTTCTACTTATAAAATTACATAAATGTGTGTATCTATCGTTGTGT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTCTACTTATAAAATTACATAAATGTGTGTATCTATCGTTGTGT  298

seq1  AACCATACTGGGATGATACTTTTGTGCTATTCCACAATTTTCATTTCTCT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATACTGGGATGATACTTTTGTGCTATTCCACAATTTTCATTTCTCT  348

seq1  GCAAATGCATGTGGGAAAGCAGTCCTGGCCAATACATATCTTTGTACATG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGCATGTGGGAAAGCAGTCCTGGCCAATACATATCTTTGTACATG  398

seq1  CTTTCAATATCATGACAGTGTTTAAAACTTGCTGTGCTATAGATTATTTA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATATCATGACAGTGTTTAAAACTTGCTGTGCTATAGATTATTTA  448

seq1  GCCATGTAAACATCCCATTAAGAGACCAGAAGGTGACAGCACATTACAGA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTAAACATCCCATTAAGAGACCAGAAGGTGACAGCACATTACAGA  498

seq1  TCTCTAGAGGATATGGACAGAGTGCCATTTTAAATTTTTACACAGAAAAA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGAGGATATGGACAGAGTGCCATTTTAAATTTTTACACAGAAAAA  548

seq1  TAGGGCAACAAATTGGGGTAATTTTCCAGTGCTTTGAAAATCAGACTGTT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCAACAAATTGGGGTAATTTTCCAGTGCTTTGAAAATCAGACTGTT  598

seq1  GTGAGTTGTATATGAAATGGGGGTATCCCCAGAGGCTCGTGTGTTTGAAC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTGTATATGAAATGGGGGTATCCCCAGAGGCTCGTGTGTTTGAAC  648

seq1  GCTTGGTCCCTGGGTTCTTGGCATTTTCACAGATGATCCTGGAGCCTTTA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTCCCTGGGTTCTTGGCATTTTCACAGATGATCCTGGAGCCTTTA  698

seq1  TTGGGCAGAACCTCACTGAAGAAAGTGGGCCCCTGCAAATAGGCCTTGAG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCAGAACCTCACTGAAGAAAGTGGGCCCCTGCAAATAGGCCTTGAG  748

seq1  GTTTTGCCACTCAGCTCCACTTCCTGTCTGTTCCTGTTTCTTGCTCCTAT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCCACTCAGCTCCACTTCCTGTCTGTTCCTGTTTCTTGCTCCTAT  798

seq1  GCCCTCCCAGCCACTGGGGGCCTTGTCCCCTTCTTAAACTATGAGGTAAA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCCAGCCACTGGGGGCCTTGTCCCCTTCTTAAACTATGAGGTAAA  848

seq1  GCACGCCCTTCCCTTCCCTCCTTGTTTCTATCTGGTCACAACAATAAGGA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCCCTTCCCTTCCCTCCTTGTTTCTATCTGGTCACAACAATAAGGA  898

seq1  AAGTAATACCAGTGAGTAGATTAGATGAGATGAGATTAGATTAGATTAAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATACCAGTGAGTAGATTAGATGAGATGAGATTAGATTAGATTAAG  948

seq1  ATAGATAGATAGACAGATAGGCATTTGATGTGATCTCTAAGCAGTCTCAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGACAGATAGGCATTTGATGTGATCTCTAAGCAGTCTCAG  998

seq1  GCATGTTACAAAATGTCTAAAATGGTCTGATTAGTAATCTGCAAGCTGCT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTACAAAATGTCTAAAATGGTCTGATTAGTAATCTGCAAGCTGCT  1048

seq1  GACAAGCTTGAAGGGACTCTCCATTTTTCTGCACCATCCTAGACACCTAC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGCTTGAAGGGACTCTCCATTTTTCTGCACCATCCTAGACACCTAC  1098

seq1  AACAGAAAACATGTGAAATGTCTACCAAAAATTGTTACATGCATACTTTT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAACATGTGAAATGTCTACCAAAAATTGTTACATGCATACTTTT  1148

seq1  TTAAATT  1145
      |||||||
seq2  TTAAATT  1155


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