BAC Information

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BAC

Clone NameB6Ng01-330I08
Chromosome18 (Build37)
Map Location 29,228,575 - 29,229,493
singlet/doubletsinglet
Overlap genenone
Upstream geneEG271505, EG625997, BC051408
Downstream geneLOC100040930, 4930578E11Rik, LOC666073
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330I08.bB6Ng01-330I08.g
ACCGA117161GA117162
length997899
definitionB6Ng01-330I08.b B6Ng01-330I08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaagttccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtacttggtatagagacagacaagtggaccaatggaatagaattgaag
acccagaaatgaacccacacacctatggtcactttgatcttcgacaaggg
agccaaaaccatccagtggaagaaagacagcattttcaacaattggtgct
ggcacaaccgggtgctcttcttttttgttttttttttccattattat
gaattctacagttatgagggctatgttcatgttcaggatttcttagttca
cctgtacacacagtcaaatttactttccttccacagaaattttaaatata
ttcacaagcaagttatatgtcccatctttgctcatatagtattaatgtga
tatgatacatagaaattccacaatagtttatctaggcataatcggccttc
atgaacatcattgtacaattttaaatctttattatggttccgtatctaaa
cccattttctgaaaatttacatgatattcaaaatttaatagaacttgtga
taggacatgctctttctgtcatttatgtgacattttttaaatagaaaaga
taaaatattataatttaggttactttaggtcattgtcaatattgtgagag
tctgatagaaaagcttgcctgctctttttcactctttctcttgtccttca
actaaaattgtcccttcattcattttgctctggccttgacaggcagctga
ttttaaagtgtgagacaattatttgtttttttggatgttaccatttattg
gaagaaggataaaatcaatgtgacatttccagaacaatgagagatgacga
tagtagatggtctttaaatgggaaacactaaattttaaaatgtcacctat
atattatgtcagactttgtcaaagataaacaataaacttatagaaataaa
aactaatcatatttcaccatattacttgtagataaagatgtgttctcatt
tgctgatgtctgcctaaatgccgccttatcacaagctagaatgactggag
ctattattatgaagtctttgattgagcattaacaaaatacaatgtttggt
gactgggaactggtattggggctcactcaagtccactaagctatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_29228575_29229493
seq2: B6Ng01-330I08.g_70_968

seq1  GAATTCTACAGTTATGAGGGCTATGTTCATGTTCAGGATTTCTTAGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGTTATGAGGGCTATGTTCATGTTCAGGATTTCTTAGTTCA  50

seq1  CCTGTACACACAGTCAAATTTACTTTCCTTCCACAGAAATTTTAAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACACACAGTCAAATTTACTTTCCTTCCACAGAAATTTTAAATATA  100

seq1  TTCACAAGCAAGTTATATGTCCCATCTTTGCTCATATAGTATTAATGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAGCAAGTTATATGTCCCATCTTTGCTCATATAGTATTAATGTGA  150

seq1  TATGATACATAGAAATTCCACAATAGTTTATCTAGGCATAATCGGCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATACATAGAAATTCCACAATAGTTTATCTAGGCATAATCGGCCTTC  200

seq1  ATGAACATCATTGTACAATTTTAAATCTTTATTATGGTTCCGTATCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATCATTGTACAATTTTAAATCTTTATTATGGTTCCGTATCTAAA  250

seq1  CCCATTTTCTGAAAATTTACATGATATTCAAAATTTAATAGAACTTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTCTGAAAATTTACATGATATTCAAAATTTAATAGAACTTGTGA  300

seq1  TAGGACATGCTCTTTCTGTCATTTATGTGACATTTTTTAAATAGAAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACATGCTCTTTCTGTCATTTATGTGACATTTTTTAAATAGAAAAGA  350

seq1  TAAAATATTATAATTTAGGTTACTTTAGGTCATTGTCAATATTGTGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTATAATTTAGGTTACTTTAGGTCATTGTCAATATTGTGAGAG  400

seq1  TCTGATAGAAAAGCTTGCCTGCTCTTTTTCACTCTTTCTCTTGTCCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAGAAAAGCTTGCCTGCTCTTTTTCACTCTTTCTCTTGTCCTTCA  450

seq1  ACTAAAATTGTCCCTTCATTCATTTTGCTCTGGCCTTGACAGGCAGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATTGTCCCTTCATTCATTTTGCTCTGGCCTTGACAGGCAGCTGA  500

seq1  TTTTAAAGTGTGAGACAATTATTTGTTTTTTTGGATGTTACCATTTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGTGTGAGACAATTATTTGTTTTTTTGGATGTTACCATTTATTG  550

seq1  GAAGAAGGATAAAATCAATGTGACATTTCCAGAACAATGAGAGATGACGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGATAAAATCAATGTGACATTTCCAGAACAATGAGAGATGACGA  600

seq1  TAGTAGATGGTCTTTAAATGGGAAACACTAAATTTTAAAAATGTCACCTA  650
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAGTAGATGGTCTTTAAATGGGAAACACTAAATTTT-AAAATGTCACCTA  649

seq1  TATATTATGTCAGACTTTGTCAAAGATAAAACAATAAAACTTATAGACAT  700
      ||||||||||||||||||||||||||| ||||||| ||||||||||| ||
seq2  TATATTATGTCAGACTTTGTCAAAGAT-AAACAAT-AAACTTATAGAAAT  697

seq1  AAAAACTAATCATATTTCACCATATTACTTGTAGATAAAGATGGTGTTCT  750
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAAACTAATCATATTTCACCATATTACTTGTAGATAAAGAT-GTGTTCT  746

seq1  CATTTTGCTGAATGTCTGCCTAAATGCCGCCTTATCACAAGCTAGAATGA  800
      || ||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CA-TTTGCTG-ATGTCTGCCTAAATGCCGCCTTATCACAAGCTAGAATGA  794

seq1  CTGGAGCTATTATTATGGAAGTCCTGTGATTTGAGCCATTAACAAAATAC  850
      |||||||||||||||| ||||| || ||| ||||| ||||||||||||||
seq2  CTGGAGCTATTATTAT-GAAGT-CTTTGA-TTGAG-CATTAACAAAATAC  840

seq1  AGATGTTTGTGTGACTGGGTACTGTGTAATTGTGGGCTCACTCCAAGTTC  900
      | ||||||| ||||||||| |||| || |||| ||||||||| |||||  
seq2  A-ATGTTTG-GTGACTGGGAACTG-GT-ATTG-GGGCTCACT-CAAGT--  882

seq1  CCATCTACAGCTATGTGTG  919
      ||| ||| |||||||||||
seq2  CCA-CTA-AGCTATGTGTG  899