BAC Information

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BAC

Clone NameB6Ng01-331E23
Chromosome18 (Build37)
Map Location 57,569,202 - 57,570,276
singlet/doubletsinglet
Overlap genenone
Upstream geneGramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1, March3, C330018D20Rik, Megf10, LOC672445, Prrc1
Downstream gene1700011I03Rik, 4930511M06Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331E23.bB6Ng01-331E23.g
ACCGA117710GA117711
length1,0831,174
definitionB6Ng01-331E23.b B6Ng01-331E23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatcctcaagcttgtatcttattcattcagagatctccacaac
ccccaagatttgaattacagatattagaaatgctaaaggcctcggatgac
agcgtaaaacagaaggacaggtgctgctgaagtctctgagcatacagcag
ggacactgcacatagacacagcccctctcacacaggtctggcaggctcct
gtgtgtcagcatcgctcccactcactgaccccagtgggaaaagtgggtaa
gaaataaccctagcctagcattgcacaccagtgctgacctgaggtcctca
cttagccattggcagtgcaggttggtttatgttacgagttagtttcccat
tgctgaaaatgtaatcgcctaaagcactatgaacctaacatctcaccatt
cagtaagaaatctgactcaggcctcattgaactagacttggcagtcagca
gagcccgcttccttctggaagcactggagacgaatcctgcatcttttcct
gtccttggaggatgcccagcctttggtccgccactgctctttttgtctgt
agtgtcagtacgagtagtttaagtcacttgtcacaaggactagctccagc
ttccttcctgtcaccctctctcatttttcaggttcgtttggattccactg
gactcatctagataattccagataatctttcaggatttctagataattca
tgataatcttttgctcttaaggtcagttgattgacaaccttaatcctgtt
ggcaagcttactatccctctaactatccctctaacacatggagtgctgga
ttaccggggtcaggctacacacctctctgtgagcattattccacaaacaa
aaaaaagtaaaggacagataaaatgtattggccatgggccaatgatggct
gtcatggctgtctctctctttttttccccagtgttgtacctgccttgctc
tttcatgacctttttgtgtttctttagaataaggcttattatactgtatc
ctatagctaataacaattgttatgtgaagatgtgaatatgtgtgcattgt
gtataagttgttatgtgagtccgtgcaaatgtg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
tccaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacgctcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataacagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactagcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgccccttcctagaaatggga
acaaaacacccatggaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgattgccatatccagggatccatcccataat
cagcttccaaacgctgacaccattgcatacactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgcccgggccctagcaa
acacagaagtggatgctcagagtcagctattgaatgggtcacacggccac
caatggaggagctagagaaagtacccaaggagctaaagggaactgcaacc
ctatatgtgaacacaatatgactaaccagtacctgagctcttgtcttcta
gctgcatatgtatcaaagatgactagtcgccattccactgaagagaagat
cctttgacttgcaaccttaattgccagtacaggcacgccaagtcaaaatg
gagaactggggttgtgttatgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_57569202_57570276
seq2: B6Ng01-331E23.b_47_1129 (reverse)

seq1  CACATATGCACGGACTCACATA--CACTTATACAC-ATGCACACATATTC  47
      ||||| ||||||||||||||||   |||||||||| ||||||||||||||
seq2  CACATTTGCACGGACTCACATAACAACTTATACACAATGCACACATATTC  50

seq1  ACATCCTCACAT-ACAATTGTTA-TAGCTATAGGATACAGTAT-ATAAGC  94
      ||||| |||||| |||||||||| ||||||||||||||||||| ||||||
seq2  ACATCTTCACATAACAATTGTTATTAGCTATAGGATACAGTATAATAAGC  100

seq1  CTTA-TCTAAAGAAACACAAAAAGGTCATGAAAGAGCAAGGCAGGTACAA  143
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTAAAGAAACACAAAAAGGTCATGAAAGAGCAAGGCAGGTACAA  150

seq1  CACTGGGGAAAAAAAGAGAGAGACAGCCATGACAGCCATCATTGGCCCAT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGAAAAAAAGAGAGAGACAGCCATGACAGCCATCATTGGCCCAT  200

seq1  GGCCAATACATTTTATCTGTCC-TTACTTTTTTTTGTTTGTGGAATAATG  242
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGCCAATACATTTTATCTGTCCTTTACTTTTTTTTGTTTGTGGAATAATG  250

seq1  CTCACAGAGAGGTGTGTAGCCTGACCCCGGTAATCCAGCACTCCATGTGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGAGAGGTGTGTAGCCTGACCCCGGTAATCCAGCACTCCATGTGT  300

seq1  TAGAGGGATAGTTAGAGGGATAGTAAGCTTGCCAACAGGATTAAGGTTGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGATAGTTAGAGGGATAGTAAGCTTGCCAACAGGATTAAGGTTGT  350

seq1  CAATCAACTGACCTTAAGAGCAAAAGATTATCATGAATTATCTAGAAATC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAACTGACCTTAAGAGCAAAAGATTATCATGAATTATCTAGAAATC  400

seq1  CTGAAAGATTATCTGGAATTATCTAGATGAGTCCAGTGGAATCCAAACGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGATTATCTGGAATTATCTAGATGAGTCCAGTGGAATCCAAACGA  450

seq1  ACCTGAAAAATGAGAGAGGGTGACAGGAAGGAAGCTGGAGCTAGTCCTTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAAAATGAGAGAGGGTGACAGGAAGGAAGCTGGAGCTAGTCCTTG  500

seq1  TGACAAGTGACTTAAACTACTCGTACTGACACTACAGACAAAAAGAGCAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGTGACTTAAACTACTCGTACTGACACTACAGACAAAAAGAGCAG  550

seq1  TGGCGGACCAAAGGCTGGGCATCCTCCAAGGACAGGAAAAGATGCAGGAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGACCAAAGGCTGGGCATCCTCCAAGGACAGGAAAAGATGCAGGAT  600

seq1  TCGTCTCCAGTGCTTCCAGAAGGAAGCGGGCTCTGCTGACTGCCAAGTCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTCCAGTGCTTCCAGAAGGAAGCGGGCTCTGCTGACTGCCAAGTCT  650

seq1  AGTTCAATGAGGCCTGAGTCAGATTTCTTACTGAATGGTGAGATGTTAGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAATGAGGCCTGAGTCAGATTTCTTACTGAATGGTGAGATGTTAGG  700

seq1  TTCATAGTGCTTTAGGCGATTACATTTTCAGCAATGGGAAACTAACTCGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTGCTTTAGGCGATTACATTTTCAGCAATGGGAAACTAACTCGT  750

seq1  AACATAAACCAACCTGCACTGCCAATGGCTAAGTGAGGACCTCAGGTCAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAACCAACCTGCACTGCCAATGGCTAAGTGAGGACCTCAGGTCAG  800

seq1  CACTGGTGTGCAATGCTAGGCTAGGGTTATTTCTTACCCACTTTTCCCAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTGTGCAATGCTAGGCTAGGGTTATTTCTTACCCACTTTTCCCAC  850

seq1  TGGGGTCAGTGAGTGGGAGCGATGCTGACACACAGGAGCCTGCCAGACCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCAGTGAGTGGGAGCGATGCTGACACACAGGAGCCTGCCAGACCT  900

seq1  GTGTGAGAGGGGCTGTGTCTATGTGCAGTGTCCCTGCTGTATGCTCAGAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGAGGGGCTGTGTCTATGTGCAGTGTCCCTGCTGTATGCTCAGAG  950

seq1  ACTTCAGCAGCACCTGTCCTTCTGTTTTACGCTGTCATCCGAGGCCTTTA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGCAGCACCTGTCCTTCTGTTTTACGCTGTCATCCGAGGCCTTTA  1000

seq1  GCATTTCTAATATCTGTAATTCAAATCTTGGGGGTTGTGGAGATCTCTGA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTAATATCTGTAATTCAAATCTTGGGGGTTGTGGAGATCTCTGA  1050

seq1  ATGAATAAGATACAAGCTTGAGGATCTGAATTC  1075
      |||||||||||||||||||||||||||||||||
seq2  ATGAATAAGATACAAGCTTGAGGATCTGAATTC  1083