BAC Information

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BAC

Clone NameB6Ng01-331I04
Chromosome18 (Build37)
Map Location 14,743,511 - 14,744,324
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040358, Zfp521, LOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867
Downstream geneSs18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151, Aqp4, LOC665473, Chst9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331I04.bB6Ng01-331I04.g
ACCGA117855GA117856
length653814
definitionB6Ng01-331I04.b B6Ng01-331I04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctagctattaactagaatgctttgctgaggtctgctgatccct
ttggtgtgcagcacagtttaaccccagaatttgtgtgttgatatttttat
ctggatgatttgtccagtgatggagatggagctgaaatccccaaatagta
ttatattggacacctctttagatcaaatatttgttttttataattttgca
tcccaatgtctattttgcagttactattctatttgtgagataaatcctat
aatcattatataacgagcttctttgtctttttcttacatttttaacttaa
aatctacattttttggtttttcaaaacagggtttctctgtgtagccctgg
ctgtcctggaactcactctgtagaccaggctggcctcgaacacagaaatc
cacctgcctctgcctcccaagtactgggattaaaggtgtgtgccaccact
gcccggcaaatccaaatcttttaaagtggagaatatgttctatttacatt
taaggtaatcattgatttatctattactcctttcattttcttaatttttc
ctggttattgtttataacctatgcttctttcctctttttataaatctttg
caattgaatggggatgttttgcattgatggggttgtttttcttttttctc
tca
gaattctgtctccgaggagaggtggaaagaggtggtctgaatctgaggca
ggcgctaacaagacccctgaggcaccacatttatgccccacattgtcttc
ccagtaggtatctgcgagcgagcatacttgctggctttgctagccactct
aagggtagtccttggtctccagcatcacagtgcctgagagcttgctagga
atggcatgagtgagctactactaccttgggcccatgagggagctactgcc
tctgactgcttttacactagagcagagctaagccctgtgcaccctcagtt
tacatagtttatctaggagacttgagtggctaaatgaattggtctgtcta
aggccatttacattagggaggaagactttgagtgatagaaaattttatat
tgaaagaacaaaatcttgtgacaggtttctatataacaacttagggaaac
tgagtcttttgggatacacacacacatatacatacacacatacatataca
tacatagacatatatacaaacacacacacacacatatatatatgtatatg
tatatacagacaaacacattcatatatatcatacaaaaataacatgtttc
attttggcatttccacacttttttttggtctgatcctctttcctttcctc
actttccccctttctattcacaggtcacatgtattctttcactatcccct
gccttaaagccctttgtcagccttggttggaaagcacctgttgcacaaga
tcctcaccattcatgtaaactcaacagtgcttctgtgaccacagaggagg
gtgtgtgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14743511_14744324
seq2: B6Ng01-331I04.g_70_883 (reverse)

seq1  CCCCCCACACACACCCTCCTCTGTGGTCACAGAAGCACTGTTGAGTTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACACACACCCTCCTCTGTGGTCACAGAAGCACTGTTGAGTTTAC  50

seq1  ATGAATGGTGAGGATCTTGTGCAACAGGTGCTTTCCAACCAAGGCTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGGTGAGGATCTTGTGCAACAGGTGCTTTCCAACCAAGGCTGACA  100

seq1  AAGGGCTTTAAGGCAGGGGATAGTGAAAGAATACATGTGACCTGTGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTTAAGGCAGGGGATAGTGAAAGAATACATGTGACCTGTGAATA  150

seq1  GAAAGGGGGAAAGTGAGGAAAGGAAAGAGGATCAGACCAAAAAAAAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGGAAAGTGAGGAAAGGAAAGAGGATCAGACCAAAAAAAAGTGT  200

seq1  GGAAATGCCAAAATGAAACATGTTATTTTTGTATGATATATATGAATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCCAAAATGAAACATGTTATTTTTGTATGATATATATGAATGTG  250

seq1  TTTGTCTGTATATACATATACATATATATATGTGTGTGTGTGTGTTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTATATACATATACATATATATATGTGTGTGTGTGTGTTTGTA  300

seq1  TATATGTCTATGTATGTATATGTATGTGTGTATGTATATGTGTGTGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTCTATGTATGTATATGTATGTGTGTATGTATATGTGTGTGTGTA  350

seq1  TCCCAAAAGACTCAGTTTCCCTAAGTTGTTATATAGAAACCTGTCACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAAGACTCAGTTTCCCTAAGTTGTTATATAGAAACCTGTCACAAG  400

seq1  ATTTTGTTCTTTCAATATAAAATTTTCTATCACTCAAAGTCTTCCTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTCTTTCAATATAAAATTTTCTATCACTCAAAGTCTTCCTCCCT  450

seq1  AATGTAAATGGCCTTAGACAGACCAATTCATTTAGCCACTCAAGTCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAATGGCCTTAGACAGACCAATTCATTTAGCCACTCAAGTCTCCT  500

seq1  AGATAAACTATGTAAACTGAGGGTGCACAGGGCTTAGCTCTGCTCTAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACTATGTAAACTGAGGGTGCACAGGGCTTAGCTCTGCTCTAGTG  550

seq1  TAAAAGCAGTCAGAGGCAGTAGCTCCCTCATGGGCCCAAGGTAGTAGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCAGTCAGAGGCAGTAGCTCCCTCATGGGCCCAAGGTAGTAGTAG  600

seq1  CTCACTCATGCCATTCCTAGCAAGCTCTCAGGCACTGTGATGCTGGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCATGCCATTCCTAGCAAGCTCTCAGGCACTGTGATGCTGGAGAC  650

seq1  CAAGGACTACCCTTAGAGTGGCTAGCAAAGCCAGCAAGTATGCTCGCTCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACTACCCTTAGAGTGGCTAGCAAAGCCAGCAAGTATGCTCGCTCG  700

seq1  CAGATACCTACTGGGAAGACAATGTGGGGCATAAATGTGGTGCCTCAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACCTACTGGGAAGACAATGTGGGGCATAAATGTGGTGCCTCAGGG  750

seq1  GTCTTGTTAGCGCCTGCCTCAGATTCAGACCACCTCTTTCCACCTCTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTTAGCGCCTGCCTCAGATTCAGACCACCTCTTTCCACCTCTCCT  800

seq1  CGGAGACAGAATTC  814
      ||||||||||||||
seq2  CGGAGACAGAATTC  814