BAC Information

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BAC

Clone NameB6Ng01-332G22
Chromosome18 (Build37)
Map Location 49,545,916 - 49,546,394
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545470
Downstream geneDtwd2, Dmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332G22.bB6Ng01-332G22.g
ACCGA118539GA118540
length1,172473
definitionB6Ng01-332G22.b B6Ng01-332G22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggccgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagag
tatacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtgtaaaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcagaa
aattggacatagtactatcggaggatcccacaatacctcttctgggcata
tatccagaagatgttccaaccggtaatatggacacatgatccactatgtt
catagaagccttatttataatagccagaagctggaaagaacccatatgcc
cctcaagagaggaatggatacagaaaatgtacctttacacaatggagtac
tacgcatctattaaaaagaatgaatttatgaatttcctaggcaaatggat
ggacctggaaggcatcatcctgagtgaggtaacccaatcacaaaagaact
cacatgatatgtactcactgataagtggatattagcccagaaacttagaa
tacccaagatacaagatacaactttgcaaaacacatgaaactcaagaaaa
atgaagatgaaaatgtggacactttgctcctttttagaactgggaacaaa
acaccaatggaaagatttacagagacaaagattggagctgagacaaaagg
atggaccatctagagactgcatatccagggatccatcccataatcagcct
ctaaatgctgacaccattgcacacagtagcaagattttgctgaaaggacc
ctgatatagctgtctcttgtgagactatgccggggcctagcaaacacagc
agtggatgctcacagtcaactaatggatggatcacagggccccaatggag
gagctagagaatgtacccaaggagctaaagggcttctgcaaccctatagt
ggagaaaatatgactaaccagtaccaccagagctcatgtcctctagctgc
atatgtatcagaagatgacctagtcggcatcagtgaagagaagttccatg
tctataactttatatgcctcagtacagggaacactaatggccaaccagta
gtaatatgtgcggctatatatc

agtcatgtacccagctctgtatgtggggaagggttgggatgtggttacta
agaaagcaaaactgaagcaccgtatctataaatacatgttcgctctacga
agacattaaatcgtgattctgggggaaagataaggatatctataagaatg
agagatgaaatttacctaattaaaatagttaagaaatacactcctaggta
ttgcaagagtcattatcagatttgggttaaactggaacccctcatgctaa
gctcaggctttgcctttcattgcccataagggtgtggctctgtcaccctt
ctatgacaagaaaggttttcgaaagaatggactgatattatcctaatgga
cggtagaatgaagctgggtcccagatgacgaagagtagcttaaagttttc
aaaaagcctgtctatccatttctgtggcaaaggaagagagagagagagag
ggggggggcggtataagggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49545916_49546394
seq2: B6Ng01-332G22.g_66_544

seq1  GAATTCAGTCATGTACCCAGCTCTGTATGTGGGGAAGGGTTGGGATGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCATGTACCCAGCTCTGTATGTGGGGAAGGGTTGGGATGTGG  50

seq1  TTACTAAGAAAGCAAAACTGAAGCACCGTATCTATAAATACATGTTCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGAAAGCAAAACTGAAGCACCGTATCTATAAATACATGTTCGCT  100

seq1  CTACGAAGACATTAAATCGTGATTCTGGGGGAAAGATAAGGATATCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGAAGACATTAAATCGTGATTCTGGGGGAAAGATAAGGATATCTATA  150

seq1  AGAATGAGAGATGAAATTTACCTAATTAAAATAGTTAAGAAATACACTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGAGATGAAATTTACCTAATTAAAATAGTTAAGAAATACACTCC  200

seq1  TAGGTATTGCAAGAGTCATTATCAGATTTGGGTTAAACTGGAACCCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATTGCAAGAGTCATTATCAGATTTGGGTTAAACTGGAACCCCTCA  250

seq1  TGCTAAGCTCAGGCTTTGCCTTTCATTGCCCATAAGGGTGTGGCTCTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGCTCAGGCTTTGCCTTTCATTGCCCATAAGGGTGTGGCTCTGTC  300

seq1  ACCCTTCTATGACAAGAAAGGTTTTCGAAAGAATGGACTGATATTATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTATGACAAGAAAGGTTTTCGAAAGAATGGACTGATATTATCCT  350

seq1  AATGGACGGTAGAATGAAGCTGGGTCCCAGATGACGAAGAGTAGCTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACGGTAGAATGAAGCTGGGTCCCAGATGACGAAGAGTAGCTTAAA  400

seq1  GTTTTCAAAAAGCCTGTCTATCCATTTCTGTGGCAAAGGAAGAGAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAAAAAGCCTGTCTATCCATTTCTGTGGCAAAGGAAGAGAGAGAG  450

seq1  AGAGAGGGGGGGGGCGGTATAAGGGGGGA  479
      |||||||||||||||||||||||||||||
seq2  AGAGAGGGGGGGGGCGGTATAAGGGGGGA  479


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