BAC Information

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BAC

Clone NameB6Ng01-333K06
Chromosome18 (Build37)
Map Location 28,969,293 - 28,970,458
singlet/doubletsinglet
Overlap genenone
Upstream geneEG271505, EG625997, BC051408
Downstream geneLOC100040930, 4930578E11Rik, LOC666073
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333K06.bB6Ng01-333K06.g
ACCGA119381GA119382
length1,142930
definitionB6Ng01-333K06.b B6Ng01-333K06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataccctttcttgactgtcatttctgtctgcctcacacttgtgg
ctaaaaatgtgatcaactaacttcttgctctaagtcactgtcattatgga
ctctctctttagaaacttaagtcaaaataaactcttctcatctttgctgt
gttatttttatcacagctatagtaaagcaatgtatatatcatccaagtat
gaggacctgagtttcttctaaagaacccagaagacaaaagccaggaagat
tttaacagtgtgttgcagatgtctccagtgagaaacctgatctcagggtt
cagattgaatagtttcttagggatgacaagggcatgatcatttgcatcaa
gagtggccaccatcttgtcacatcaacatacacatatgtttctggcagat
aatggaaacatcttatattttatatcgtcttatgtctaagatgtatattt
gccccactcttcaactgggaacctacatgatatagaggtagacacagcaa
aattgaaatgtctgaatatgtgtggaaaaagaggagattaatttcagttt
tgcttcaagcagaaccaaatagaagctcagctcactatcatatcacttat
ccctctcaactgtctatatttttttcattcttcactttttttccaagtat
agttaaggaaattctgctaaggcacagacattttctttcacttgtactga
aacatccatttcaaaacctccacagagactgaagtccatctggtcacttc
taagcttcatgtagatctacatttattataataaaagccatggtttgaaa
cagagttatacatattcctaattgatttctgtggtcgattgggagtactt
catgccttctttatctaaaatgaatagaactcagcttattaaattatttg
tctttagagttagcctaagttgaatgtcattgcaaatacagtcttaagtc
tgcacattaggtagcaggtatgttctctctacagtgaatgtttaaatatg
atgcatgtttttcttccccatggagttatacgtatctatcagtacatcta
gcactatgatttcatacatagtttcattggtatgtttgcttattattata
ttattattagccaagaatgtgagtgctgtttgaacacaatgt

tccgcggaattctttctttctttctttctttctttctttctttctttctt
tctttctttctttctttctctctctctctcactctctctttctctctctt
tctctccctccttccctctttctttctttctttctttctttctttctttc
tttctttctttctttcttccttccttccttccttccttccttccttcctt
ccttccttctttctttctttctttctttctttctttctttctttctttct
ttcttcctttctttctttcttccctgactcagaaatcattgagtagagag
ctgcttaatttccacaagcatgtggactttctgttgtttttgtagtgaaa
gtgcagctttaatccatggtggtctgataagattcaaggagtcatttcca
tcatcttatgtctgctgaaacctgccatgggaccaactatatgatcagtt
ttggagaagactccactacatactgtgctaagaaaaatatatattctttg
tttttgaatgaaatgttctatagatatgcattaggcccatttgaattata
acttctgttagtttcattatctctctgtttattttctgttttgatgatgt
gcagtggtgagagtaggatgttgatgtctcccactattaatatttggtgt
ttaatgtatgattcaagctttagtgatgtctcttttatacatgtgtgtac
ttttacatttggtgaagatgtttagaactgagatatcctcttgttatagt
atgaagtatgatgagtatgaagtgtccttccttgtctcttgattactttt
tggttcaaactcaattgcttttaaaagtctgtttctttttaatatgaaat
tgattccattgatgttaggggtgttaatgaccaaacattgttactttcct
gttatttttattttggtgggtggttggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28969293_28970458
seq2: B6Ng01-333K06.b_45_1186 (reverse)

seq1  ACATTGTGTTCAAAACAGCACTTCACCAATTCTTGGCTAAATAAATAAAT  50
      ||||||||||| ||||||||| ||||  ||||||||||         |||
seq2  ACATTGTGTTC-AAACAGCAC-TCAC--ATTCTTGGCT---------AAT  37

seq1  AAATAAATAAATAAAAGCAAAACAATACAAATGAAAACTAATGGTAATGG  100
      ||  | ||||  | |||||||   |||| |||| ||||| |||   ||| 
seq2  AATAATATAATAATAAGCAAA--CATACCAATG-AAACT-ATG--TATG-  80

seq1  AAAATCATAGTTGCTAGATGTACCTTGATAGATACGTATAACTCCATGGG  150
       ||||||||| ||||||||||||  |||||||||||||||||||||||||
seq2  -AAATCATAG-TGCTAGATGTAC--TGATAGATACGTATAACTCCATGGG  126

seq1  GAAGAAAAACATGCATCATATTTAAACATTCACTGTAGAGAGAACATACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAACATGCATCATATTTAAACATTCACTGTAGAGAGAACATACC  176

seq1  TGCTACCTAATGTGCAGACTTAAGACTGTATTTGCAATGACATTCAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCTAATGTGCAGACTTAAGACTGTATTTGCAATGACATTCAACTT  226

seq1  AGGCTAACTCTAAAGACAAATAATTTAATAAGCTGAGTTCTATTCATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACTCTAAAGACAAATAATTTAATAAGCTGAGTTCTATTCATTTT  276

seq1  AGATAAAGAAGGCATGAAGTACTCCCAATCGACCACAGAAATCAATTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGAAGGCATGAAGTACTCCCAATCGACCACAGAAATCAATTAGG  326

seq1  AATATGTATAACTCTGTTTCAAACCATGGCTTTTATTATAATAAATGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTATAACTCTGTTTCAAACCATGGCTTTTATTATAATAAATGTAG  376

seq1  ATCTACATGAAGCTTAGAAGTGACCAGATGGACTTCAGTCTCTGTGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACATGAAGCTTAGAAGTGACCAGATGGACTTCAGTCTCTGTGGAGG  426

seq1  TTTTGAAATGGATGTTTCAGTACAAGTGAAAGAAAATGTCTGTGCCTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATGGATGTTTCAGTACAAGTGAAAGAAAATGTCTGTGCCTTAG  476

seq1  CAGAATTTCCTTAACTATACTTGGAAAAAAAGTGAAGAATGAAAAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTCCTTAACTATACTTGGAAAAAAAGTGAAGAATGAAAAAAATA  526

seq1  TAGACAGTTGAGAGGGATAAGTGATATGATAGTGAGCTGAGCTTCTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGTTGAGAGGGATAAGTGATATGATAGTGAGCTGAGCTTCTATTT  576

seq1  GGTTCTGCTTGAAGCAAAACTGAAATTAATCTCCTCTTTTTCCACACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGCTTGAAGCAAAACTGAAATTAATCTCCTCTTTTTCCACACATA  626

seq1  TTCAGACATTTCAATTTTGCTGTGTCTACCTCTATATCATGTAGGTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACATTTCAATTTTGCTGTGTCTACCTCTATATCATGTAGGTTCCC  676

seq1  AGTTGAAGAGTGGGGCAAATATACATCTTAGACATAAGACGATATAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAGAGTGGGGCAAATATACATCTTAGACATAAGACGATATAAAAT  726

seq1  ATAAGATGTTTCCATTATCTGCCAGAAACATATGTGTATGTTGATGTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATGTTTCCATTATCTGCCAGAAACATATGTGTATGTTGATGTGAC  776

seq1  AAGATGGTGGCCACTCTTGATGCAAATGATCATGCCCTTGTCATCCCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGTGGCCACTCTTGATGCAAATGATCATGCCCTTGTCATCCCTAA  826

seq1  GAAACTATTCAATCTGAACCCTGAGATCAGGTTTCTCACTGGAGACATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATTCAATCTGAACCCTGAGATCAGGTTTCTCACTGGAGACATCT  876

seq1  GCAACACACTGTTAAAATCTTCCTGGCTTTTGTCTTCTGGGTTCTTTAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACACTGTTAAAATCTTCCTGGCTTTTGTCTTCTGGGTTCTTTAGA  926

seq1  AGAAACTCAGGTCCTCATACTTGGATGATATATACATTGCTTTACTATAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTCAGGTCCTCATACTTGGATGATATATACATTGCTTTACTATAG  976

seq1  CTGTGATAAAAATAACACAGCAAAGATGAGAAGAGTTTATTTTGACTTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATAAAAATAACACAGCAAAGATGAGAAGAGTTTATTTTGACTTAA  1026

seq1  GTTTCTAAAGAGAGAGTCCATAATGACAGTGACTTAGAGCAAGAAGTTAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTAAAGAGAGAGTCCATAATGACAGTGACTTAGAGCAAGAAGTTAG  1076

seq1  TTGATCACATTTTTAGCCACAAGTGTGAGGCAGACAGAAATGACAGTCAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCACATTTTTAGCCACAAGTGTGAGGCAGACAGAAATGACAGTCAA  1126

seq1  GAAAGGGTATGAATTC  1166
      ||||||||||||||||
seq2  GAAAGGGTATGAATTC  1142


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