BAC Information

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BAC

Clone NameB6Ng01-334K23
Chromosome18 (Build37)
Map Location 51,838,997 - 51,840,147
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042373, LOC100042385, Prr16
Downstream geneEG240289, Ftmt, Srfbp1, Lox, Zfp474, 1700034E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334K23.bB6Ng01-334K23.g
ACCGA120129GA120130
length1,1411,201
definitionB6Ng01-334K23.b B6Ng01-334K23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcttgcacttgcgcataaggctggtttactagttaggcacag
tggaagccagtgccatcttataatggcaattgctcacggcacggctctcc
acatcctatctcaacttaataaagacaatccccacctgacaagttcatag
acaaacttgatcttgcgttgctgagacactctttccaagcaagtatatag
tgccaagtcaattgaaacaattgcattaactgtttgatgtggtcaggaca
ccttattttttttatttattttattaggtattttcttcatttattttatt
aacacactaagataattactttataaatgatgtgtatagattagatttta
taaatatatggttgattttaaagtaattttagaaaattacaaaataaagt
tgtgtattgtaaaatctgagaattgaaaccaagcagctttcactgatgtt
tctgataaagactcaatatttgccaaaggcactgtggtggttcctctgat
cttgtactagggtgacacaggcatgtggatctttttgaatcccaggccag
cttgatctaaatagtgagttccagtttaccctgggtgttataatagtagg
aattgactcctactataattattgaactggtttatttgttaaatatcgaa
ttgtatgtctttcataatgtgaactacagtaaagtacacataattttata
taatctgacacaatgaaatgttcagtacccattcatgactataggatgag
ataatgtttagcatggcacagagaagaaaacagtcgttgccatagaacag
gcatgcctccacatattcaatgtctgactgcacccatttccaaagtcccc
ggagcagcacatcagatctcaagatgctgtaaagaagtgattgttttttc
ataagattgaaaaaggcaaacaagagttgcaatttggaactgatcaaagc
agatagaggaaatccaataaaattactttcacattaaatgagttagaatg
ggggaaatacaatagatgaaaggtaacctaaatgagctctttcaaatatg
taagttggtttatgaattctcagtactaaccctgacaattaatttaattg
ggttggaagtttcatactcatctttccatggtgaacaagtc

gaattcaaggctgtcatccttaaacaaaccacatatcaaatctgaagcaa
atctgggctatatgagacacttctcaaaaaaaaaaaagttttctattcac
atttttaactctcaaagttgaagggtaaataaatatagccttgtaactga
agatttagtctattactggaaaacaactgtttttagcacaatgtaggctg
gtgggtcatctctggataaataaccaaagacagtatgggaagtctttgca
aagaaatatttttgaaataaaattttctctcatacaatatatccggatca
tagttttccatcctccaccatctccttcccaatttcctgtcttctccaga
tttattctccacgtttcactttggaaaagagcaggctttggagagataaa
aaccaaacacccaagcatgatcaaacagtacacaatgagagaaggcaaaa
atcctcatatggaggctgggcaaggcaacccagtaggagggaaacagttc
caagaggaaaaaaaagtcagagacactaccagtcccctttcagcaacccc
acagaaacaccaaactgacatttttatatagaatgaactgccagatagta
gtgatgcacacctttaatcccaggacttgggaggcagagacaggcagatt
tctgagttcgaggccagcctgggctacagagtgagttccaggacagacag
gactatacagagaaacccagtcttgaaaaaacaaaaaaaaaaacaaaaaa
caaaaacaaaaaaaacaaacaaacaaacaaaaaagaatgaacccaattta
catttcctctgatcgtgggtaagggttcctgaagtgaaaatgtctggtgt
gtttggagactcaatgtgtcatgtgttttttttttgtatttttttgtttt
tttctggaaactgtctgatgagaggatgctttattgaagcagacaggtga
gaggatgttttggtgagaacagacatgtgattttttttcctggggagctg
cctggtgagagggcatgtgacgctttgctggagctgatgccgtgaggagg
acatggtggccatttgggaaatgttacagtattacccaacaagaccgagg
aatgatgctatttctatggttcaccctttgtcctcctcacttgacatgcc
gttccatgaactccatatagggaggaaccaccaccctcagaagaaactct
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_51838997_51840147
seq2: B6Ng01-334K23.b_50_1190

seq1  GAATTCACTCTTGCACTTGCGCATAAGGCTGGTTTACTAGTTAGGCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTGCACTTGCGCATAAGGCTGGTTTACTAGTTAGGCACAG  50

seq1  TGGAAGCCAGTGCCATCTTATAATGGCAATTGCTCACGGCACGGCTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCCAGTGCCATCTTATAATGGCAATTGCTCACGGCACGGCTCTCC  100

seq1  ACATCCTATCTCAACTTAATAAAGACAATCCCCACCTGACAAGTTCATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTATCTCAACTTAATAAAGACAATCCCCACCTGACAAGTTCATAG  150

seq1  ACAAACTTGATCTTGCGTTGCTGAGACACTCTTTCCAAGCAAGTATATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTTGATCTTGCGTTGCTGAGACACTCTTTCCAAGCAAGTATATAG  200

seq1  TGCCAAGTCAATTGAAACAATTGCATTAACTGTTTGATGTGGTCAGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGTCAATTGAAACAATTGCATTAACTGTTTGATGTGGTCAGGACA  250

seq1  CCTTATTTTTTTTATTTATTTTATTAGGTATTTTCTTCATTTATTTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTTTTTTATTTATTTTATTAGGTATTTTCTTCATTTATTTTATT  300

seq1  AACACACTAAGATAATTACTTTATAAATGATGTGTATAGATTAGATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTAAGATAATTACTTTATAAATGATGTGTATAGATTAGATTTTA  350

seq1  TAAATATATGGTTGATTTTAAAGTAATTTTAGAAAATTACAAAATAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATATGGTTGATTTTAAAGTAATTTTAGAAAATTACAAAATAAAGT  400

seq1  TGTGTATTGTAAAATCTGAGAATTGAAACCAAGCAGCTTTCACTGATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTGTAAAATCTGAGAATTGAAACCAAGCAGCTTTCACTGATGTT  450

seq1  TCTGATAAAGACTCAATATTTGCCAAAGGCACTGTGGTGGTTCCTCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAAAGACTCAATATTTGCCAAAGGCACTGTGGTGGTTCCTCTGAT  500

seq1  CTTGTACTAGGGTGACACAGGCATGTGGATCTTTTTGAATCCCAGGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACTAGGGTGACACAGGCATGTGGATCTTTTTGAATCCCAGGCCAG  550

seq1  CTTGATCTAAATAGTGAGTTCCAGTTTACCCTGGGTGTTATAATAGTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCTAAATAGTGAGTTCCAGTTTACCCTGGGTGTTATAATAGTAGG  600

seq1  AATTGACTCCTACTATAATTATTGAACTGGTTTATTTGTTAAATATCGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACTCCTACTATAATTATTGAACTGGTTTATTTGTTAAATATCGAA  650

seq1  TTGTATGTCTTTCATAATGTGAACTACAGTAAAGTACACATAATTTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTCTTTCATAATGTGAACTACAGTAAAGTACACATAATTTTATA  700

seq1  TAATCTGACACAATGAAATGTTCAGTACCCATTCATGACTATAGGATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGACACAATGAAATGTTCAGTACCCATTCATGACTATAGGATGAG  750

seq1  ATAATGTTTAGCATGGCACAGAGAAGAAAACAGTCGTTGCCATAGAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTTAGCATGGCACAGAGAAGAAAACAGTCGTTGCCATAGAACAG  800

seq1  GCATGCCTCCACATATTCAATGTCTGACTGCACCCATTTCCAAAGTCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCTCCACATATTCAATGTCTGACTGCACCCATTTCCAAAGTCCCC  850

seq1  GGAGCAGCACATCAGATCTCAAGATGCTGTAAAGAAGTGATTGTTTTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGCACATCAGATCTCAAGATGCTGTAAAGAAGTGATTGTTTTTTC  900

seq1  ATAAGATTGAAAAAGGCAAACAAGAGTTGCAATTTGGAACTGATCAAAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATTGAAAAAGGCAAACAAGAGTTGCAATTTGGAACTGATCAAAGC  950

seq1  AGATAGAGGAAATCCAATAAAATTACTTTCAACATTAAAATGAGTTAGAA  1000
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  AGATAGAGGAAATCCAATAAAATTACTTTC-ACATT-AAATGAGTTAGAA  998

seq1  TGGGGAAAATACAATAGATGAAAGGTTAAAACTAAATGAGCTCTTTCAAA  1050
      ||||| ||||||||||||||||||||  || |||||||||||||||||||
seq2  TGGGGGAAATACAATAGATGAAAGGT--AACCTAAATGAGCTCTTTCAAA  1046

seq1  TATGGTAAGTTTGGTTTTATGGAATTCTCAGTACTAAACCCTGACATTTT  1100
      ||| |||||||  | ||||| |||||||||||||| ||||||||||  ||
seq2  TAT-GTAAGTT--GGTTTAT-GAATTCTCAGTACT-AACCCTGACA-ATT  1090

seq1  AATTTAAATTGGGTTTGTAAGTTTCATACTCATCTTT-CAT-GTGAACAA  1148
      ||||| ||||||| ||| ||||||||||||||||||| ||| ||||||||
seq2  AATTT-AATTGGG-TTGGAAGTTTCATACTCATCTTTCCATGGTGAACAA  1138

seq1  GTC  1151
      |||
seq2  GTC  1141


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