BAC Information

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BAC

Clone NameB6Ng01-337J15
Chromosome18 (Build37)
Map Location 49,791,135 - 49,792,283
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneDtwd2, Dmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93, Hdhd1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337J15.bB6Ng01-337J15.g
ACCGA122174GA122175
length1,1741,138
definitionB6Ng01-337J15.b B6Ng01-337J15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggagttggaagaggacacatagagccaactcgatgaacccag
agataacgaacttaaggaaaacaaatgactgagcagtgcccaagacaaca
gaatcaaggttgatagaagtgacaaaggcaatgcgtaatttgaaaacaga
attcaataaaaagaaacattgatgagaagaactcaagctgaagtgaagat
agaattgaaaaatccaataactcaacaagacaacacaagggaaagcctta
caaggagaatcaatcaggcagaagagactcaagactcaaagacagaggat
ctacatgaaataagcaaagagtataaaaactgtaaagcaaaaacataaag
aagggacatccaggaaatgtcgaacaccattaaaagcccaaacctttgaa
ttataagcataaatgagggaaaagaatcccaggtcaatggcatagatcag
atcataaacaagatagaaggaaacatccctaaacaaagacataagcctgt
ataatacaagacatatacagaccaccacctagacaaggccaggaaataaa
ctcctccagcatatcatagttaaaacaccacttatatgtaacaaaaaagg
ccgattgaaagcaatagaaaaaagaaaaagacacaagtcatatgtaaaag
aaaacccactagaataacatctggtttctcaataggaactttgaaagcca
gaagagcatagagctaggcatttcatgccctaaaagaccagaacagccaa
catagactaatgtaccccagataaccatctactatagtttggagaaagaa
aaacttttccatgaaataaacattaaaaaattatactcaccagacgtggt
ggtgcatgtctttatcccagcacttggggaggcagaggcaggcgaatttc
tgagttcaaggccagcctgggtctacagagtgagttccccggacagtcag
ggctacacagagaaatcctgtctcaaaaaaacaaaaacaaaacaaacaaa
aatcatactcaaccacaacaggaaaaaaaactaaagaaaatacagagtat
atttcagctgacaagaatgacatagcaagcgaatgtaaaaaggaaacagg
tatattgcctaaacctaagtacactagcacctaatcttacagttctccta
ggttccaaaaggccacacaatact
gaattccttattgaagtacaagatcagcttttaaggatgtgactggtaat
ggcccagggaaggaatctaccatcatgagagaatatagtgacaaaccttg
gggaattttttttaatttttgtaataaagtgttgtttcttgttgaccaag
ttcttaatcgctaccaacacaatttctagacagttaattttctagtgttt
gttttcagcatgtgtactttttaagttggatgacatagcgatcctcctaa
aacgcatgttaatgcattttactaacatttagttaaccttggcaggctac
gattcttttgaatttgtcagaaattttgtttccaaatttgataaacaaac
aacgataatagtttggagttaattaaattgtagagaatgccacaaactta
attatttctgttagatttcattttataagctacactttctaatcttcatg
ttcttgctggagaagaacaatgctgacacacccatcactgaactcattat
agcaggggccactaaaatttaaaaaacacaattaataagagaaaatcata
ataaattcacttagtgtattttatatggcatgagaggctttagaaatgaa
gactgagggaaacagagaaacctatgttttaagtgcaggggtatggagac
gatggatatgaaaagtacatttggaccaagggtatctggtatcatggcaa
aagaatgaaggggattaagcaggccttttaaattagattgtcctcctctc
tgtgaacaccgtgtgtagggtgggcatctagcaatgaagttcttatgatt
tgcttccgaggcaggtcagtaattctcatggcatgactcacagaacaagg
gtgctaagaaagcttttcttcaagccgggcgtggtggcgcacgcctttac
tcccagcactcagttgggcagaggcaggcaggtttctgagttcaaaggcc
agcctgtctataaagtgagttccaggacagccagggctatacagagtacc
ctgtctcaaaaaccaaaaacagaagctttttcttctgagttcctccagcg
tcaaagtgcagtatttgagcagtattttccggaatctgacgtagcaactg
acagcttagaaattgaggttatcctaccagttatgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49791135_49792283
seq2: B6Ng01-337J15.g_63_1200

seq1  GAATTCCTTATTGAAGTACAAGATCAGCTTTTAAGGATGTGACTGGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATTGAAGTACAAGATCAGCTTTTAAGGATGTGACTGGTAAT  50

seq1  GGCCCAGGGAAGGAATCTACCATCATGAGAGAATATAGTGACAAACCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGGGAAGGAATCTACCATCATGAGAGAATATAGTGACAAACCTTG  100

seq1  GGGAATTTTTTTTAATTTTTGTAATAAAGTGTTGTTTCTTGTTGACCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTTTTTTTAATTTTTGTAATAAAGTGTTGTTTCTTGTTGACCAAG  150

seq1  TTCTTAATCGCTACCAACACAATTTCTAGACAGTTAATTTTCTAGTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATCGCTACCAACACAATTTCTAGACAGTTAATTTTCTAGTGTTT  200

seq1  GTTTTCAGCATGTGTACTTTTTAAGTTGGATGACATAGCGATCCTCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGCATGTGTACTTTTTAAGTTGGATGACATAGCGATCCTCCTAA  250

seq1  AACGCATGTTAATGCATTTTACTAACATTTAGTTAACCTTGGCAGGCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCATGTTAATGCATTTTACTAACATTTAGTTAACCTTGGCAGGCTAC  300

seq1  GATTCTTTTGAATTTGTCAGAAATTTTGTTTCCAAATTTGATAAACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTTTGAATTTGTCAGAAATTTTGTTTCCAAATTTGATAAACAAAC  350

seq1  AACGATAATAGTTTGGAGTTAATTAAATTGTAGAGAATGCCACAAACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATAATAGTTTGGAGTTAATTAAATTGTAGAGAATGCCACAAACTTA  400

seq1  ATTATTTCTGTTAGATTTCATTTTATAAGCTACACTTTCTAATCTTCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTCTGTTAGATTTCATTTTATAAGCTACACTTTCTAATCTTCATG  450

seq1  TTCTTGCTGGAGAAGAACAATGCTGACACACCCATCACTGAACTCATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCTGGAGAAGAACAATGCTGACACACCCATCACTGAACTCATTAT  500

seq1  AGCAGGGGCCACTAAAATTTAAAAAACACAATTAATAAGAGAAAATCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGGCCACTAAAATTTAAAAAACACAATTAATAAGAGAAAATCATA  550

seq1  ATAAATTCACTTAGTGTATTTTATATGGCATGAGAGGCTTTAGAAATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTCACTTAGTGTATTTTATATGGCATGAGAGGCTTTAGAAATGAA  600

seq1  GACTGAGGGAAACAGAGAAACCTATGTTTTAAGTGCAGGGGTATGGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGGAAACAGAGAAACCTATGTTTTAAGTGCAGGGGTATGGAGAC  650

seq1  GATGGATATGAAAAGTACATTTGGACCAAGGGTATCTGGTATCATGGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATATGAAAAGTACATTTGGACCAAGGGTATCTGGTATCATGGCAA  700

seq1  AAGAATGAAGGGGATTAAGCAGGCCTTTTAAATTAGATTGTCCTCCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAAGGGGATTAAGCAGGCCTTTTAAATTAGATTGTCCTCCTCTC  750

seq1  TGTGAACACCGTGTGTAGGGTGGGCATCTAGCAATGAAGTTCTTATGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACACCGTGTGTAGGGTGGGCATCTAGCAATGAAGTTCTTATGATT  800

seq1  TGCTTCCGAGGCAGGTCAGTAATTCTCATGGCATGACTCACAGAACAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCGAGGCAGGTCAGTAATTCTCATGGCATGACTCACAGAACAAGG  850

seq1  GTGCTAAGAAAGCTTTTCTTC-AGCCGGGCGTGGTGGCGCACGCCTTTAC  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTGCTAAGAAAGCTTTTCTTCAAGCCGGGCGTGGTGGCGCACGCCTTTAC  900

seq1  TCCCAGCACTCAGTT-GGCAGAGGCAGGCAGGTTTCTGAGTTC-AAGGCC  947
      ||||||||||||||| ||||||||||||||||||||||||||| ||||||
seq2  TCCCAGCACTCAGTTGGGCAGAGGCAGGCAGGTTTCTGAGTTCAAAGGCC  950

seq1  AGCCTGGTCTATAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGTAA  997
      ||||| |||||||||||||||||||||||||||||||||||||||||| |
seq2  AGCCT-GTCTATAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGT-A  998

seq1  CCCTGTCTCAAAAAACCAAAAACAAGAAAGCTTTTCTTCTGAGGTTTCCT  1047
      ||||||||| ||||||||||||| ||||   ||||||||||||  |||||
seq2  CCCTGTCTC-AAAAACCAAAAAC-AGAAGCTTTTTCTTCTGAG--TTCCT  1044

seq1  CCAGCGTCAAAGTGCAGTATTTTGAAGGCAGTATTTCCCGGATCCTGACG  1097
      ||||||||||||||||||| |||||  ||||||||| |||||  ||||| 
seq2  CCAGCGTCAAAGTGCAGTA-TTTGA--GCAGTATTTTCCGGAATCTGAC-  1090

seq1  GTAGGCACTGACAGCTTAGAAATGTAAAGTTATCTTACCAGTTTTAATGT  1147
      ||||  ||||||||||||||||| | | |||||| ||||||||   ||||
seq2  GTAGCAACTGACAGCTTAGAAAT-TGAGGTTATCCTACCAGTT---ATGT  1136

seq1  TC  1149
      ||
seq2  TC  1138